Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
HORVU1Hr1G076310.1 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT1G07000.1 | HORVU1Hr1G076310.1 | AT1G29640.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1B01G307200.1 | Wheat | cytosol | 92.34 | 97.86 |
TraesCS1D01G293400.1 | Wheat | cytosol | 92.34 | 97.71 |
TraesCS1A01G297800.1 | Wheat | cytosol | 92.34 | 97.71 |
Zm00001d038447_P001 | Maize | plastid | 73.99 | 88.12 |
EES19684 | Sorghum | cytosol | 84.83 | 88.01 |
Zm00001d010602_P001 | Maize | extracellular, mitochondrion, plasma membrane | 83.53 | 87.31 |
Os05t0473500-01 | Rice | plastid | 74.86 | 87.06 |
HORVU3Hr1G088110.3 | Barley | cytosol, plastid | 77.31 | 77.09 |
GSMUA_Achr10P... | Banana | cytosol | 50.87 | 57.99 |
CDY02822 | Canola | cytosol | 19.94 | 47.92 |
VIT_06s0004g07440.t01 | Wine grape | cytosol | 42.63 | 47.05 |
Bra020368.1-P | Field mustard | cytosol | 32.37 | 46.86 |
CDY70944 | Canola | cytosol | 28.61 | 46.7 |
KRH17115 | Soybean | cytosol | 43.06 | 46.27 |
PGSC0003DMT400065456 | Potato | cytosol | 41.76 | 46.09 |
AT5G58430.1 | Thale cress | cytosol | 41.47 | 45.99 |
KRH72760 | Soybean | cytosol | 42.05 | 45.47 |
Solyc08g066070.1.1 | Tomato | cytosol | 41.33 | 45.32 |
Bra006767.1-P | Field mustard | cytosol | 40.46 | 45.31 |
CDY60022 | Canola | cytosol | 40.32 | 45.15 |
CDY02823 | Canola | cytosol | 15.9 | 44.18 |
Bra015543.1-P | Field mustard | cytosol | 36.85 | 42.71 |
AT1G07000.1 | Thale cress | cytosol | 36.85 | 42.57 |
CDY06667 | Canola | cytosol | 36.71 | 42.55 |
CDY10240 | Canola | cytosol | 36.56 | 42.38 |
HORVU7Hr1G054020.2 | Barley | plasma membrane | 27.17 | 32.03 |
HORVU3Hr1G094570.3 | Barley | cytosol | 29.19 | 30.1 |
HORVU2Hr1G069050.1 | Barley | cytosol | 22.11 | 29.42 |
HORVU7Hr1G028060.3 | Barley | cytosol | 28.18 | 29.32 |
HORVU5Hr1G062200.3 | Barley | cytosol | 29.05 | 28.59 |
HORVU3Hr1G073910.1 | Barley | cytosol | 24.28 | 28.05 |
HORVU3Hr1G073850.1 | Barley | cytosol, nucleus, peroxisome | 24.28 | 27.81 |
HORVU4Hr1G020050.1 | Barley | cytosol, plastid | 26.3 | 25.71 |
HORVU4Hr1G021040.3 | Barley | mitochondrion | 23.84 | 25.27 |
HORVU5Hr1G040140.3 | Barley | cytosol | 21.1 | 24.37 |
HORVU2Hr1G123350.29 | Barley | cytosol | 18.93 | 24.17 |
HORVU7Hr1G064400.2 | Barley | cytosol | 24.57 | 24.15 |
HORVU2Hr1G123320.1 | Barley | cytosol | 24.86 | 23.99 |
HORVU5Hr1G039240.1 | Barley | plastid | 24.28 | 23.08 |
Protein Annotations
EnsemblPlants:HORVU1Hr1G070390.1 | EnsemblPlantsGene:HORVU1Hr1G070390 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 | InterPro:Cullin_repeat-like_dom_sf |
InterPro:Exo70 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF30 | PFAM:PF03081 | SEG:seg | SUPFAM:SSF74788 |
UniParc:UPI000B46E784 | UniProt:A0A287G4C9 | MapMan:22.6.3.1 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:489289900..489292529
Molecular Weight (calculated)
75447.6 Da
IEP (calculated)
4.768
GRAVY (calculated)
-0.189
Length
692 amino acids
Sequence
(BLAST)
(BLAST)
001: TTTTRSRVWR GGNLVQIGAS RRPPWEGRLP ANLRAHGAPA MAEDGEEKLL ATVQHIVQTL GSSDTMTEDI LKVFSNYDGR LSLDKIYAAR GAVAAAAGGG
101: GGGXGERSMP ASPPLPPPPA VAAPGSSARP PVTSMERTVR TLDRQISQFV TMDRLIWADS GDADAFLEAV DDLIGTVQEL DAAGTNRVLL DRADELLSRC
201: MARLEDEFRA LIERPDDAAP SAPGGFASDG SDDEDFYGGE DGYGDEPIPI AKPVTDYDVV IDALSPGSIA NVHQISRRMV DAGFGRECAE AYAAARRGFV
301: DESVARLGVR PRTAEEVHAS PWEELEFDIA RWIPAFNMVF RILIPSERRL CDRVFDGLAP FGDLAFIAAV RTQALQLISF GDAISSSSRS PERLFRVVDM
401: YEAVRDILPD LDPVFSDPYS AALRAEVSAV CNTLGSSIKG IFMELENLIR RDPARVATPG GGIHPITRYV MNYLRAACGS RQTLEEVMEG DLSAGGRAAA
501: SVDPDRPTSS LAVHIAWIMD VLHKNLDTKS KIYRDPSLAC IFLMNNGKYI IQKVNDSELG VLLGDDWIKQ LSTRVRRWSM DYQRSTWGKV TTVLQIGGSG
601: VGALPAKAML QKLRMFNTYF EEIYAVQSEW MVADDQLRMD VRSAVEDSVM PAYAALIARL KSAPETGRDL YIKYTPEDVE AHIQHLFEGA AK
101: GGGXGERSMP ASPPLPPPPA VAAPGSSARP PVTSMERTVR TLDRQISQFV TMDRLIWADS GDADAFLEAV DDLIGTVQEL DAAGTNRVLL DRADELLSRC
201: MARLEDEFRA LIERPDDAAP SAPGGFASDG SDDEDFYGGE DGYGDEPIPI AKPVTDYDVV IDALSPGSIA NVHQISRRMV DAGFGRECAE AYAAARRGFV
301: DESVARLGVR PRTAEEVHAS PWEELEFDIA RWIPAFNMVF RILIPSERRL CDRVFDGLAP FGDLAFIAAV RTQALQLISF GDAISSSSRS PERLFRVVDM
401: YEAVRDILPD LDPVFSDPYS AALRAEVSAV CNTLGSSIKG IFMELENLIR RDPARVATPG GGIHPITRYV MNYLRAACGS RQTLEEVMEG DLSAGGRAAA
501: SVDPDRPTSS LAVHIAWIMD VLHKNLDTKS KIYRDPSLAC IFLMNNGKYI IQKVNDSELG VLLGDDWIKQ LSTRVRRWSM DYQRSTWGKV TTVLQIGGSG
601: VGALPAKAML QKLRMFNTYF EEIYAVQSEW MVADDQLRMD VRSAVEDSVM PAYAALIARL KSAPETGRDL YIKYTPEDVE AHIQHLFEGA AK
001: MAENGEEKLL AVARHIAKTL GHNESMADDI LQIFSNFDGR FSREKLAEGQ AGEDGSGVAT LERALNSIDG QISRFVAADQ PIWADPADSA AFLDTIDELV
101: AIIREWSPMA SEKPIGICLT RADDMMQQAM FRIEEEFRSL MERGAESFGL NPQGDAGAMN HRFDSEEEED DDRDFNNGDD IQIPVAQPLT DYDLIIDALP
201: SATINDLHEM AKRMLGAGFG KACSHVYSSC RREFLEESMS RLGLQKLSIE EVHKMPWQEL EDEIDRWIKA ANVALRILFP SERRLCDRVF FGFSSAADLS
301: FMEVCRGSTI QLLNFADAIA IGSRSPERLF KVLDVFETMR DLMPEFESVF SDQFCSVLRN EAVTIWKRLG EAIRGIFMEL ENLIRRDPAK AAVPGGGLHP
401: ITRYVMNYLR AACRSRQTLE QVFEESNGVP SKDSTLLTVQ MSWIMELLES NLEVKSKVYK DPALCYVFLM NNGRYIVQKV KDGDLGLLLG DDWIRKHNVK
501: VKQYHMNYQR SSWNKMLGLL KVDNTAAGMN GLGKTMKEKL KQFNIQFDEI CKVHSTWVVF DEQLKEELKI SLARLLVPAY GSFIGRFQNL GDIGKNADKY
601: IKYGVEDIEA RINELFKGTT TGRK
101: AIIREWSPMA SEKPIGICLT RADDMMQQAM FRIEEEFRSL MERGAESFGL NPQGDAGAMN HRFDSEEEED DDRDFNNGDD IQIPVAQPLT DYDLIIDALP
201: SATINDLHEM AKRMLGAGFG KACSHVYSSC RREFLEESMS RLGLQKLSIE EVHKMPWQEL EDEIDRWIKA ANVALRILFP SERRLCDRVF FGFSSAADLS
301: FMEVCRGSTI QLLNFADAIA IGSRSPERLF KVLDVFETMR DLMPEFESVF SDQFCSVLRN EAVTIWKRLG EAIRGIFMEL ENLIRRDPAK AAVPGGGLHP
401: ITRYVMNYLR AACRSRQTLE QVFEESNGVP SKDSTLLTVQ MSWIMELLES NLEVKSKVYK DPALCYVFLM NNGRYIVQKV KDGDLGLLLG DDWIRKHNVK
501: VKQYHMNYQR SSWNKMLGLL KVDNTAAGMN GLGKTMKEKL KQFNIQFDEI CKVHSTWVVF DEQLKEELKI SLARLLVPAY GSFIGRFQNL GDIGKNADKY
601: IKYGVEDIEA RINELFKGTT TGRK
Arabidopsis Description
EXO70B1Exocyst complex component EXO70B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGH9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.