Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
mitochondrion: 27297264 plasma membrane: 27341663 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19684 | Sorghum | cytosol | 96.07 | 95.35 |
| Zm00001d038447_P001 | Maize | plastid | 82.02 | 93.46 |
| TraesCS1D01G293400.1 | Wheat | cytosol | 88.37 | 89.45 |
| TraesCS1A01G297800.1 | Wheat | cytosol | 88.37 | 89.45 |
| TraesCS1B01G307200.1 | Wheat | cytosol | 88.22 | 89.43 |
| Os05t0473500-01 | Rice | plastid | 79.15 | 88.07 |
| HORVU1Hr1G070390.1 | Barley | cytosol, mitochondrion | 87.31 | 83.53 |
| GSMUA_Achr10P... | Banana | cytosol | 51.36 | 56.01 |
| VIT_06s0004g07440.t01 | Wine grape | cytosol | 44.71 | 47.21 |
| CDY70944 | Canola | cytosol | 29.46 | 45.99 |
| KRH17115 | Soybean | cytosol | 44.26 | 45.5 |
| CDY02823 | Canola | cytosol | 17.07 | 45.38 |
| AT5G58430.1 | Thale cress | cytosol | 42.3 | 44.87 |
| KRH72760 | Soybean | cytosol | 43.35 | 44.84 |
| PGSC0003DMT400065456 | Potato | cytosol | 42.45 | 44.82 |
| Solyc08g066070.1.1 | Tomato | cytosol | 42.3 | 44.37 |
| Bra020368.1-P | Field mustard | cytosol | 31.87 | 44.14 |
| Bra006767.1-P | Field mustard | cytosol | 41.09 | 44.01 |
| CDY02822 | Canola | cytosol | 19.03 | 43.75 |
| CDY60022 | Canola | cytosol | 40.63 | 43.53 |
| Zm00001d043015_P001 | Maize | mitochondrion | 67.98 | 41.74 |
| Bra015543.1-P | Field mustard | cytosol | 37.61 | 41.71 |
| CDY10240 | Canola | cytosol | 37.46 | 41.54 |
| CDY06667 | Canola | cytosol | 37.46 | 41.54 |
| AT1G07000.1 | Thale cress | cytosol | 37.16 | 41.07 |
| Zm00001d032075_P001 | Maize | cytosol | 28.85 | 30.27 |
| Zm00001d005816_P001 | Maize | cytosol | 28.55 | 29.67 |
| Zm00001d031614_P001 | Maize | cytosol | 26.74 | 29.45 |
| Zm00001d050095_P001 | Maize | cytosol | 27.79 | 29.39 |
| Zm00001d020617_P001 | Maize | cytosol | 28.25 | 29.31 |
| Zm00001d042331_P001 | Maize | cytosol, plastid | 24.92 | 28.95 |
| Zm00001d012020_P001 | Maize | cytosol | 29.15 | 28.72 |
| Zm00001d025206_P001 | Maize | cytosol | 29.46 | 27.78 |
| Zm00001d000403_P001 | Maize | extracellular | 27.64 | 26.95 |
| Zm00001d001765_P001 | Maize | mitochondrion | 25.53 | 26.37 |
| Zm00001d004846_P001 | Maize | cytosol, plastid | 27.04 | 26.17 |
| Zm00001d052779_P001 | Maize | cytosol, mitochondrion | 24.92 | 26.03 |
| Zm00001d041908_P001 | Maize | plastid | 26.43 | 25.85 |
| Zm00001d053192_P001 | Maize | cytosol, plastid | 26.59 | 25.77 |
| Zm00001d023513_P001 | Maize | plastid | 25.98 | 25.18 |
| Zm00001d043365_P001 | Maize | peroxisome | 23.11 | 23.94 |
| Zm00001d023472_P001 | Maize | cytosol | 21.9 | 23.13 |
| Zm00001d023469_P001 | Maize | cytosol | 20.39 | 20.0 |
| Zm00001d050972_P005 | Maize | cytosol, peroxisome, plasma membrane | 25.83 | 13.78 |
Protein Annotations
| EnsemblPlants:Zm00001d010602_P001 | EnsemblPlants:Zm00001d010602_T001 | EnsemblPlantsGene:Zm00001d010602 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF30 | PFAM:PF03081 | ProteinID:AQK94433.1 |
| SEG:seg | SUPFAM:SSF74788 | UniParc:UPI000221D730 | UniProt:K7VWG1 | MapMan:22.6.3.1 | : |
Description
Protein binding protein
Coordinates
chr8:-:121532075..121534063
Molecular Weight (calculated)
71932.6 Da
IEP (calculated)
4.549
GRAVY (calculated)
-0.121
Length
662 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEDGEEKLL ATVQHIVQTL GSSDTMTEDI LKVFSNYDGR LSLDKLYAAR AAAAAAASGG GGGGGGGGGG GIVGERSMPT SPPLPPPPAA AVSAAGPRPL
101: VTSMERTVRA LDRQISQFVA MDRLIWADSA DADAFLEAVD DLIGTVQELD AAGTNRALLD RSDELLSRCM ARLEDEFREL IERPDAAAPV VPGGFGSDGS
201: DDDEEDFGGG NNYGDEPIPI AKPVTDYDVV IDALSPGSIA NVHQIARRMV DAGFGRECAE AYAAARRGFV DESVARLGVR SRTAEEVHAS PWEELEFDIA
301: RWIPAFNMVF RILIPSERRL CDRVFDGLAP FGDLAFIAAV RTQALQLISF GDAISSSSRA PERLFRVVDM YEAVRDILPD LDPVFSDPYS AALRAEVSSM
401: CNTLGSSIKG IFMELENLIR RDPARIAAQG GVIHPITRYV MNYLRAACGS RQTLEEVMEG DFGANGGAPV AVDPDRPTSS LAVHIAWIMD VLQKNLDMKS
501: KIYRDPSLAS IFLMNNGKYI IHKVNDSELG VLLGDEWIKQ MTNRVRRWSM DYQRATWGKV TTVLQSGTPG IGGLPAKAML QKLRMFNTYF EEIYAAQSEW
601: VIADDQLKVD IRAAVEETVM PVYASLIAKL KSSPETGRDL YIKYTPEDVV AHIQHLFEGA AK
101: VTSMERTVRA LDRQISQFVA MDRLIWADSA DADAFLEAVD DLIGTVQELD AAGTNRALLD RSDELLSRCM ARLEDEFREL IERPDAAAPV VPGGFGSDGS
201: DDDEEDFGGG NNYGDEPIPI AKPVTDYDVV IDALSPGSIA NVHQIARRMV DAGFGRECAE AYAAARRGFV DESVARLGVR SRTAEEVHAS PWEELEFDIA
301: RWIPAFNMVF RILIPSERRL CDRVFDGLAP FGDLAFIAAV RTQALQLISF GDAISSSSRA PERLFRVVDM YEAVRDILPD LDPVFSDPYS AALRAEVSSM
401: CNTLGSSIKG IFMELENLIR RDPARIAAQG GVIHPITRYV MNYLRAACGS RQTLEEVMEG DFGANGGAPV AVDPDRPTSS LAVHIAWIMD VLQKNLDMKS
501: KIYRDPSLAS IFLMNNGKYI IHKVNDSELG VLLGDEWIKQ MTNRVRRWSM DYQRATWGKV TTVLQSGTPG IGGLPAKAML QKLRMFNTYF EEIYAAQSEW
601: VIADDQLKVD IRAAVEETVM PVYASLIAKL KSSPETGRDL YIKYTPEDVV AHIQHLFEGA AK
001: MAENGEEKLL AVARHIAKTL GHNESMADDI LQIFSNFDGR FSREKLAEGQ AGEDGSGVAT LERALNSIDG QISRFVAADQ PIWADPADSA AFLDTIDELV
101: AIIREWSPMA SEKPIGICLT RADDMMQQAM FRIEEEFRSL MERGAESFGL NPQGDAGAMN HRFDSEEEED DDRDFNNGDD IQIPVAQPLT DYDLIIDALP
201: SATINDLHEM AKRMLGAGFG KACSHVYSSC RREFLEESMS RLGLQKLSIE EVHKMPWQEL EDEIDRWIKA ANVALRILFP SERRLCDRVF FGFSSAADLS
301: FMEVCRGSTI QLLNFADAIA IGSRSPERLF KVLDVFETMR DLMPEFESVF SDQFCSVLRN EAVTIWKRLG EAIRGIFMEL ENLIRRDPAK AAVPGGGLHP
401: ITRYVMNYLR AACRSRQTLE QVFEESNGVP SKDSTLLTVQ MSWIMELLES NLEVKSKVYK DPALCYVFLM NNGRYIVQKV KDGDLGLLLG DDWIRKHNVK
501: VKQYHMNYQR SSWNKMLGLL KVDNTAAGMN GLGKTMKEKL KQFNIQFDEI CKVHSTWVVF DEQLKEELKI SLARLLVPAY GSFIGRFQNL GDIGKNADKY
601: IKYGVEDIEA RINELFKGTT TGRK
101: AIIREWSPMA SEKPIGICLT RADDMMQQAM FRIEEEFRSL MERGAESFGL NPQGDAGAMN HRFDSEEEED DDRDFNNGDD IQIPVAQPLT DYDLIIDALP
201: SATINDLHEM AKRMLGAGFG KACSHVYSSC RREFLEESMS RLGLQKLSIE EVHKMPWQEL EDEIDRWIKA ANVALRILFP SERRLCDRVF FGFSSAADLS
301: FMEVCRGSTI QLLNFADAIA IGSRSPERLF KVLDVFETMR DLMPEFESVF SDQFCSVLRN EAVTIWKRLG EAIRGIFMEL ENLIRRDPAK AAVPGGGLHP
401: ITRYVMNYLR AACRSRQTLE QVFEESNGVP SKDSTLLTVQ MSWIMELLES NLEVKSKVYK DPALCYVFLM NNGRYIVQKV KDGDLGLLLG DDWIRKHNVK
501: VKQYHMNYQR SSWNKMLGLL KVDNTAAGMN GLGKTMKEKL KQFNIQFDEI CKVHSTWVVF DEQLKEELKI SLARLLVPAY GSFIGRFQNL GDIGKNADKY
601: IKYGVEDIEA RINELFKGTT TGRK
Arabidopsis Description
EXO70B1Exocyst complex component EXO70B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGH9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.