Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015543.1-P | Field mustard | cytosol | 87.31 | 87.6 |
| CDY10240 | Canola | cytosol | 86.98 | 87.27 |
| CDY06667 | Canola | cytosol | 86.81 | 87.1 |
| AT5G58430.1 | Thale cress | cytosol | 54.59 | 52.4 |
| PGSC0003DMT400065456 | Potato | cytosol | 54.59 | 52.15 |
| Solyc08g066070.1.1 | Tomato | cytosol | 54.92 | 52.14 |
| GSMUA_Achr10P... | Banana | cytosol | 43.57 | 43.0 |
| Zm00001d038447_P001 | Maize | plastid | 39.07 | 40.28 |
| Os05t0473500-01 | Rice | plastid | 39.9 | 40.17 |
| TraesCS1B01G307200.1 | Wheat | cytosol | 42.9 | 39.36 |
| TraesCS1A01G297800.1 | Wheat | cytosol | 42.57 | 38.99 |
| TraesCS1D01G293400.1 | Wheat | cytosol | 42.57 | 38.99 |
| OQU87774 | Sorghum | cytosol | 41.74 | 38.7 |
| Os01t0827500-01 | Rice | plasma membrane | 41.07 | 37.73 |
| TraesCS3D01G341800.1 | Wheat | cytosol | 40.23 | 37.36 |
| EES19684 | Sorghum | cytosol | 41.57 | 37.33 |
| TraesCS3A01G348200.1 | Wheat | cytosol | 40.23 | 37.19 |
| Zm00001d010602_P001 | Maize | extracellular, mitochondrion, plasma membrane | 41.07 | 37.16 |
| TraesCS3B01G380100.1 | Wheat | cytosol | 40.07 | 36.92 |
| HORVU1Hr1G070390.1 | Barley | cytosol, mitochondrion | 42.57 | 36.85 |
| EES01688 | Sorghum | cytosol | 31.72 | 35.65 |
| HORVU3Hr1G088110.3 | Barley | cytosol, plastid | 40.23 | 34.73 |
| Os01t0827600-01 | Rice | cytosol | 30.38 | 32.91 |
| AT1G72470.1 | Thale cress | nucleus | 30.05 | 28.44 |
| AT5G13150.1 | Thale cress | nucleus | 30.22 | 27.72 |
| AT1G54090.1 | Thale cress | nucleus | 28.55 | 27.49 |
| AT3G14090.1 | Thale cress | cytoskeleton, cytosol, nucleus | 28.55 | 27.45 |
| AT5G50380.1 | Thale cress | nucleus | 30.88 | 27.09 |
| AT5G13990.1 | Thale cress | nucleus | 30.05 | 25.9 |
| AT3G29400.1 | Thale cress | cytosol | 28.38 | 25.84 |
| AT5G03540.3 | Thale cress | cytosol | 27.88 | 25.15 |
| AT5G61010.1 | Thale cress | cytosol | 25.71 | 24.1 |
| AT3G55150.1 | Thale cress | plastid | 25.38 | 23.9 |
| AT5G52340.1 | Thale cress | cytosol | 25.04 | 23.77 |
| AT3G09520.1 | Thale cress | cytosol | 24.54 | 23.41 |
| AT2G39380.1 | Thale cress | plastid | 24.37 | 22.92 |
| AT2G28650.1 | Thale cress | plastid | 21.7 | 22.69 |
| AT1G07725.1 | Thale cress | cytosol, nucleus, plastid | 22.87 | 22.28 |
| AT5G59730.1 | Thale cress | cytosol, plastid | 23.37 | 22.08 |
| AT5G52350.1 | Thale cress | cytosol | 21.54 | 22.01 |
| AT2G28640.1 | Thale cress | mitochondrion | 21.54 | 21.32 |
| AT3G09530.1 | Thale cress | mitochondrion | 22.54 | 21.19 |
| Zm00001d043015_P001 | Maize | mitochondrion | 37.9 | 21.06 |
Protein Annotations
| Gene3D:1.20.1280.170 | MapMan:22.6.3.1 | EntrezGene:837210 | UniProt:A0A178WCB5 | ProteinID:AAF82219.1 | ProteinID:AEE28064.1 |
| EMBL:AK221323 | ArrayExpress:AT1G07000 | EnsemblPlantsGene:AT1G07000 | RefSeq:AT1G07000 | TAIR:AT1G07000 | RefSeq:AT1G07000-TAIR-G |
| EnsemblPlants:AT1G07000.1 | TAIR:AT1G07000.1 | Symbol:ATEXO70B2 | EMBL:AY075660 | EMBL:AY101526 | InterPro:Cullin_repeat-like_dom_sf |
| InterPro:Exo70 | GO:GO:0000145 | GO:GO:0002237 | GO:GO:0002238 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005615 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006887 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 | GO:GO:0009414 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009617 | GO:GO:0009620 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 |
| GO:GO:0031410 | GO:GO:0042545 | GO:GO:0043621 | GO:GO:0045335 | GO:GO:0070062 | GO:GO:0090333 |
| GO:GO:1900150 | GO:GO:1900426 | GO:GO:1902290 | RefSeq:NP_172181.1 | ProteinID:OAP14672.1 | PFAM:PF03081 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF29 | UniProt:Q9LMJ4 | SUPFAM:SSF74788 |
| UniParc:UPI00000AB6CD | SEG:seg | : | : | : | : |
Description
ATEXO70B2EXO70B2 [Source:UniProtKB/TrEMBL;Acc:A0A178WCB5]
Coordinates
chr1:-:2150158..2152541
Molecular Weight (calculated)
67718.5 Da
IEP (calculated)
4.835
GRAVY (calculated)
-0.322
Length
599 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAGDENLY AAARDIARAL GKDPSAAGDI LQILSGYGAS GNRGGDPRPT PSRGGSNVNF DRALTSLERQ ISSYIVEDRP IWSDPVDSRT FLDSVDELLA
101: IAGDLRSMAG DKSVAVCQSR ADELIQQVMF RLQEEFGFVM DRAPDSFDSD DEFPGEEDND TSDGVIVARP ITDYKIVIEA LQSSVIGDLN AIAVRMVAGG
201: FAKECSRVYS SRRREFLEES LSRLHLRGLS MEEVQESPWQ DLEDEIDRWI KAVTLIFHVF FPSERLLCDR VFSDLPVSSV TDLSFMEVCR GTTTQLLNFA
301: DAIALGSRLP ERLFKVVDLY EAMQDLIPKM ETLFSDRYCS PLRHEALAIH KRLGEAIRGI FMELENLIRR DPPKTAFPGG GIHPITRYVM NYLRAACKSR
401: QSLEQILDQT GNETGSDTRP LSVQIIWVLE LLESNLEGKK RTYRDPSLCF LFMMNNDKYI LDKAKDNELG LVLGEDWIVK HAAKLRQYHS NYRRSSWNQV
501: VGLLRTDGPY PKLVENLRLF KSQFDEVCKV QSQWVVSDGQ LREELRSSVA GIVSPAYSNF IRRLKESPEI NGRRGEPFIP YTVEDVEFII KRLFKESSS
101: IAGDLRSMAG DKSVAVCQSR ADELIQQVMF RLQEEFGFVM DRAPDSFDSD DEFPGEEDND TSDGVIVARP ITDYKIVIEA LQSSVIGDLN AIAVRMVAGG
201: FAKECSRVYS SRRREFLEES LSRLHLRGLS MEEVQESPWQ DLEDEIDRWI KAVTLIFHVF FPSERLLCDR VFSDLPVSSV TDLSFMEVCR GTTTQLLNFA
301: DAIALGSRLP ERLFKVVDLY EAMQDLIPKM ETLFSDRYCS PLRHEALAIH KRLGEAIRGI FMELENLIRR DPPKTAFPGG GIHPITRYVM NYLRAACKSR
401: QSLEQILDQT GNETGSDTRP LSVQIIWVLE LLESNLEGKK RTYRDPSLCF LFMMNNDKYI LDKAKDNELG LVLGEDWIVK HAAKLRQYHS NYRRSSWNQV
501: VGLLRTDGPY PKLVENLRLF KSQFDEVCKV QSQWVVSDGQ LREELRSSVA GIVSPAYSNF IRRLKESPEI NGRRGEPFIP YTVEDVEFII KRLFKESSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.