Factsheet for TraesCS3A01G348200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G339100.1
TraesCS1A01G351000.1
TraesCS1B01G351400.1
TraesCS1B01G365200.1
TraesCS3D01G283600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07000.1	TraesCS1A01G339100.1	AT1G29640.1	21798944
AT1G07000.1	TraesCS1A01G351000.1	AT1G29640.1	21798944
AT1G07000.1	TraesCS1B01G351400.1	AT1G29640.1	21798944
AT1G07000.1	TraesCS1B01G365200.1	AT1G29640.1	21798944
AT1G07000.1	TraesCS3D01G283600.1	AT1G29640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G341800.1	Wheat	cytosol	99.23	99.69
TraesCS3B01G380100.1	Wheat	cytosol	99.23	98.92
HORVU3Hr1G088110.3	Barley	cytosol, plastid	98.77	92.22
Os01t0827500-01	Rice	plasma membrane	89.35	88.8
OQU87774	Sorghum	cytosol	88.43	88.7
TraesCS1A01G297800.1	Wheat	cytosol	81.94	81.19
GSMUA_Achr10P...	Banana	cytosol	53.86	57.5
VIT_06s0004g07440.t01	Wine grape	cytosol	45.68	47.21
PGSC0003DMT400065456	Potato	cytosol	45.52	47.05
CDY70944	Canola	cytosol	30.56	46.7
Solyc08g066070.1.1	Tomato	cytosol	45.06	46.28
AT5G58430.1	Thale cress	cytosol	44.29	45.99
KRH17115	Soybean	cytosol	45.37	45.65
Zm00001d043015_P001	Maize	mitochondrion	75.77	45.55
CDY02823	Canola	cytosol	17.44	45.38
CDY02822	Canola	cytosol	20.06	45.14
KRH72760	Soybean	cytosol	44.44	45.0
Bra020368.1-P	Field mustard	cytosol	33.18	44.98
Bra006767.1-P	Field mustard	cytosol	42.59	44.66
CDY60022	Canola	cytosol	42.28	44.34
Bra015543.1-P	Field mustard	cytosol	37.96	41.21
CDY06667	Canola	cytosol	37.96	41.21
CDY10240	Canola	cytosol	37.81	41.04
AT1G07000.1	Thale cress	cytosol	37.19	40.23
TraesCS5A01G213100.1	Wheat	cytosol	28.55	30.94
TraesCS7A01G290900.2	Wheat	cytosol	30.25	30.53
TraesCS7A01G259600.1	Wheat	cytosol, nucleus, plastid	27.16	30.29
TraesCS3A01G429600.1	Wheat	cytosol	30.25	29.52
TraesCS7A01G134400.1	Wheat	cytosol	30.4	29.23
TraesCS3A01G302600.1	Wheat	peroxisome	26.7	28.88
TraesCS2A01G281600.1	Wheat	cytosol	29.78	28.47
TraesCS2A01G583800.2	Wheat	cytosol, mitochondrion, nucleus	25.93	26.37
TraesCS4A01G200100.3	Wheat	cytosol, mitochondrion	26.23	26.11
TraesCS4A01G208500.1	Wheat	cytosol	27.62	25.28
TraesCS5A01G122400.1	Wheat	mitochondrion	27.62	24.22
TraesCS5A01G125500.1	Wheat	cytosol, mitochondrion	23.3	23.7
TraesCS2A01G583700.1	Wheat	cytosol, plastid	22.38	22.83

Protein Annotations

EnsemblPlants:TraesCS3A01G348200.1	EnsemblPlantsGene:TraesCS3A01G348200	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	InterPro:Cullin_repeat-like_dom_sf
InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF30	PFAM:PF03081	SEG:seg	SUPFAM:SSF74788
MapMan:22.6.3.1	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:597162513..597164636

Molecular Weight (calculated)

70667.3 Da

IEP (calculated)

4.556

GRAVY (calculated)

-0.107

Length

648 amino acids

Sequence
(BLAST)

001: MAEDGEEKLL ATVQHIAKTL GRTGTMTEDI LKVFSNYDGR LSLDKLYAAA AAAGGGGGGG AVEHSMSMPA SSPPPVLPSA AAAAMPAPVT SLERTVRTLD
101: RQISQFVTME RLVWADSADA DAFLEAVDDL IGTVQELDAA GTNRGLLDRA DELLSRCMAR LEDEFRALIE RPDDAAPAAP GGFDSEQSDD EDYDADDGYG
201: DEPIPIAKPV TDFDVVIDAL PPGSVSDVHQ IARRMVDAGF GRECAEAYAA ARRGFIDESV ARLGIRSRTS DEVHSLPWEE LEFDIARWIP AFKMVFRILI
301: PSERRLSDRV FEGLAPYGDL AFVAAVRTQA LQLISFGDAV AAASRAPERL FRVIDMYEAV RDLLPDLDPV FADPYSAALR AEVSAVCNTL GSSIKGIFME
401: LENLIRRDPA RVAVPGGGIH PITRYVMNYL RAACGSRQTL EEVMEGDLGA LGVTAIAVDP DRPTSSLAVH IAWIMDVLHK NLESKSKIYR DPPLASIFLM
501: NNGKYVIHKV NDSELGVLLG DDWMKQMLSR VRRWSMEYQR GAWAKVMSVL QTGGSGFSGL PPKAMLQKLQ MFNGYLEEIR AAQSEWVITD DQLRADVKAA
601: IADSVLPAYK GLIARLRSSP DPPQDLFIKH TPEDVEACIQ HLFEGIGK

Best Arabidopsis Sequence Match ( AT1G07000.1 )
(BLAST)

001: MAEAGDENLY AAARDIARAL GKDPSAAGDI LQILSGYGAS GNRGGDPRPT PSRGGSNVNF DRALTSLERQ ISSYIVEDRP IWSDPVDSRT FLDSVDELLA
101: IAGDLRSMAG DKSVAVCQSR ADELIQQVMF RLQEEFGFVM DRAPDSFDSD DEFPGEEDND TSDGVIVARP ITDYKIVIEA LQSSVIGDLN AIAVRMVAGG
201: FAKECSRVYS SRRREFLEES LSRLHLRGLS MEEVQESPWQ DLEDEIDRWI KAVTLIFHVF FPSERLLCDR VFSDLPVSSV TDLSFMEVCR GTTTQLLNFA
301: DAIALGSRLP ERLFKVVDLY EAMQDLIPKM ETLFSDRYCS PLRHEALAIH KRLGEAIRGI FMELENLIRR DPPKTAFPGG GIHPITRYVM NYLRAACKSR
401: QSLEQILDQT GNETGSDTRP LSVQIIWVLE LLESNLEGKK RTYRDPSLCF LFMMNNDKYI LDKAKDNELG LVLGEDWIVK HAAKLRQYHS NYRRSSWNQV
501: VGLLRTDGPY PKLVENLRLF KSQFDEVCKV QSQWVVSDGQ LREELRSSVA GIVSPAYSNF IRRLKESPEI NGRRGEPFIP YTVEDVEFII KRLFKESSS

Arabidopsis Description

ATEXO70B2EXO70B2 [Source:UniProtKB/TrEMBL;Acc:A0A178WCB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.