Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G076310.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G07000.1 | HORVU1Hr1G076310.1 | AT1G29640.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G341800.1 | Wheat | cytosol | 92.07 | 99.07 |
| TraesCS3A01G348200.1 | Wheat | cytosol | 92.22 | 98.77 |
| TraesCS3B01G380100.1 | Wheat | cytosol | 92.36 | 98.62 |
| Os01t0827500-01 | Rice | plasma membrane | 83.43 | 88.8 |
| OQU87774 | Sorghum | cytosol | 82.42 | 88.54 |
| HORVU1Hr1G070390.1 | Barley | cytosol, mitochondrion | 77.09 | 77.31 |
| GSMUA_Achr10P... | Banana | cytosol | 50.43 | 57.66 |
| VIT_06s0004g07440.t01 | Wine grape | cytosol | 42.8 | 47.37 |
| PGSC0003DMT400065456 | Potato | cytosol | 42.51 | 47.05 |
| CDY70944 | Canola | cytosol | 28.53 | 46.7 |
| Solyc08g066070.1.1 | Tomato | cytosol | 42.07 | 46.28 |
| AT5G58430.1 | Thale cress | cytosol | 41.21 | 45.83 |
| KRH17115 | Soybean | cytosol | 42.36 | 45.65 |
| CDY02823 | Canola | cytosol | 16.28 | 45.38 |
| Zm00001d043015_P001 | Maize | mitochondrion | 70.32 | 45.27 |
| CDY02822 | Canola | cytosol | 18.73 | 45.14 |
| KRH72760 | Soybean | cytosol | 41.5 | 45.0 |
| Bra020368.1-P | Field mustard | cytosol | 30.98 | 44.98 |
| Bra006767.1-P | Field mustard | cytosol | 39.77 | 44.66 |
| CDY60022 | Canola | cytosol | 39.48 | 44.34 |
| Bra015543.1-P | Field mustard | cytosol | 35.45 | 41.21 |
| CDY06667 | Canola | cytosol | 35.45 | 41.21 |
| CDY10240 | Canola | cytosol | 35.3 | 41.04 |
| AT1G07000.1 | Thale cress | cytosol | 34.73 | 40.23 |
| HORVU7Hr1G054020.2 | Barley | plasma membrane | 25.22 | 29.81 |
| HORVU7Hr1G028060.3 | Barley | cytosol | 28.39 | 29.62 |
| HORVU2Hr1G069050.1 | Barley | cytosol | 22.19 | 29.62 |
| HORVU3Hr1G094570.3 | Barley | cytosol | 28.1 | 29.06 |
| HORVU3Hr1G073910.1 | Barley | cytosol | 25.07 | 29.05 |
| HORVU3Hr1G073850.1 | Barley | cytosol, nucleus, peroxisome | 25.22 | 28.97 |
| HORVU5Hr1G062200.3 | Barley | cytosol | 28.67 | 28.31 |
| HORVU4Hr1G021040.3 | Barley | mitochondrion | 24.35 | 25.88 |
| HORVU4Hr1G020050.1 | Barley | cytosol, plastid | 26.22 | 25.71 |
| HORVU5Hr1G040140.3 | Barley | cytosol | 21.33 | 24.71 |
| HORVU7Hr1G064400.2 | Barley | cytosol | 24.64 | 24.29 |
| HORVU2Hr1G123320.1 | Barley | cytosol | 24.64 | 23.85 |
| HORVU5Hr1G039240.1 | Barley | plastid | 24.35 | 23.21 |
| HORVU2Hr1G123350.29 | Barley | cytosol | 18.01 | 23.06 |
Protein Annotations
| EMBL:AK356032 | EnsemblPlants:HORVU3Hr1G088110.3 | EnsemblPlantsGene:HORVU3Hr1G088110 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF30 | PFAM:PF03081 | SEG:seg |
| SUPFAM:SSF74788 | UniParc:UPI000B4780B3 | UniProt:A0A287M4Y3 | MapMan:22.6.3.1 | : | : |
Description
No Description!
Coordinates
chrchr3H:+:623757092..623759536
Molecular Weight (calculated)
75731.3 Da
IEP (calculated)
4.777
GRAVY (calculated)
-0.165
Length
694 amino acids
Sequence
(BLAST)
(BLAST)
001: TNLPSSPHEH HRSPPPQPLP PPRRVTEQTL ARTSPGVPSG VGFLSRLMAE DGEEKLLATV QHIAKTLGRT GTMTEDILKV FSNYDGRLSL DKLYAAAAAA
101: GGGGGAGEHS MSMPASSPPP VLPTAAAAHS MPPPVTSLER TVRTLDRQIS QFVTMERLVW ADSADADAFL EAVDDLIGTV QELDAAGTNR GLLDRADELL
201: SRCMARLEDE FRALIERPDD AAPAAPGGFD SEQSDDEDFD ADDGYGDEPI PIAKPVTDFD VVIDALPPGS VSDVHQIARR MVDAGFGREC AEAYAAARRG
301: FIDESVARLG IRSRTSDEVH SLPWEELEFD IARWIPAFKM VFRILIPSER RLSDRVFEGL APYGDLAFVA AVRTQALQLI SFGDAVAAAS RAPERLFRVI
401: DMYEAVRDLL PDLDPVFADP YSAALRAEVS AVCNTLGSSI KGIFMELENL IRRDPARVAV PGGGIHPITR YVMNYLRAAC GSRQTLEEVM EGDLGALGVT
501: AIAVDPDRPT SSLAVHIAWI MDVLHKNLES KSKIYRDPPL ASIFLMNNGK YVIHKVNDSE LGVLLGDDWM KQMLSRVRRW SMEYQRGAWA KVMSVLQTGG
601: SGFSGLPPKA MLQKLQMFNG YLEEIRAAQS EWVITDDQLR ADVKAAIADS VLPAYKGLIA RLRSSPDAPQ DLFIKHTPED VEACIQHLFE GIGK
101: GGGGGAGEHS MSMPASSPPP VLPTAAAAHS MPPPVTSLER TVRTLDRQIS QFVTMERLVW ADSADADAFL EAVDDLIGTV QELDAAGTNR GLLDRADELL
201: SRCMARLEDE FRALIERPDD AAPAAPGGFD SEQSDDEDFD ADDGYGDEPI PIAKPVTDFD VVIDALPPGS VSDVHQIARR MVDAGFGREC AEAYAAARRG
301: FIDESVARLG IRSRTSDEVH SLPWEELEFD IARWIPAFKM VFRILIPSER RLSDRVFEGL APYGDLAFVA AVRTQALQLI SFGDAVAAAS RAPERLFRVI
401: DMYEAVRDLL PDLDPVFADP YSAALRAEVS AVCNTLGSSI KGIFMELENL IRRDPARVAV PGGGIHPITR YVMNYLRAAC GSRQTLEEVM EGDLGALGVT
501: AIAVDPDRPT SSLAVHIAWI MDVLHKNLES KSKIYRDPPL ASIFLMNNGK YVIHKVNDSE LGVLLGDDWM KQMLSRVRRW SMEYQRGAWA KVMSVLQTGG
601: SGFSGLPPKA MLQKLQMFNG YLEEIRAAQS EWVITDDQLR ADVKAAIADS VLPAYKGLIA RLRSSPDAPQ DLFIKHTPED VEACIQHLFE GIGK
001: MAENGEEKLL AVARHIAKTL GHNESMADDI LQIFSNFDGR FSREKLAEGQ AGEDGSGVAT LERALNSIDG QISRFVAADQ PIWADPADSA AFLDTIDELV
101: AIIREWSPMA SEKPIGICLT RADDMMQQAM FRIEEEFRSL MERGAESFGL NPQGDAGAMN HRFDSEEEED DDRDFNNGDD IQIPVAQPLT DYDLIIDALP
201: SATINDLHEM AKRMLGAGFG KACSHVYSSC RREFLEESMS RLGLQKLSIE EVHKMPWQEL EDEIDRWIKA ANVALRILFP SERRLCDRVF FGFSSAADLS
301: FMEVCRGSTI QLLNFADAIA IGSRSPERLF KVLDVFETMR DLMPEFESVF SDQFCSVLRN EAVTIWKRLG EAIRGIFMEL ENLIRRDPAK AAVPGGGLHP
401: ITRYVMNYLR AACRSRQTLE QVFEESNGVP SKDSTLLTVQ MSWIMELLES NLEVKSKVYK DPALCYVFLM NNGRYIVQKV KDGDLGLLLG DDWIRKHNVK
501: VKQYHMNYQR SSWNKMLGLL KVDNTAAGMN GLGKTMKEKL KQFNIQFDEI CKVHSTWVVF DEQLKEELKI SLARLLVPAY GSFIGRFQNL GDIGKNADKY
601: IKYGVEDIEA RINELFKGTT TGRK
101: AIIREWSPMA SEKPIGICLT RADDMMQQAM FRIEEEFRSL MERGAESFGL NPQGDAGAMN HRFDSEEEED DDRDFNNGDD IQIPVAQPLT DYDLIIDALP
201: SATINDLHEM AKRMLGAGFG KACSHVYSSC RREFLEESMS RLGLQKLSIE EVHKMPWQEL EDEIDRWIKA ANVALRILFP SERRLCDRVF FGFSSAADLS
301: FMEVCRGSTI QLLNFADAIA IGSRSPERLF KVLDVFETMR DLMPEFESVF SDQFCSVLRN EAVTIWKRLG EAIRGIFMEL ENLIRRDPAK AAVPGGGLHP
401: ITRYVMNYLR AACRSRQTLE QVFEESNGVP SKDSTLLTVQ MSWIMELLES NLEVKSKVYK DPALCYVFLM NNGRYIVQKV KDGDLGLLLG DDWIRKHNVK
501: VKQYHMNYQR SSWNKMLGLL KVDNTAAGMN GLGKTMKEKL KQFNIQFDEI CKVHSTWVVF DEQLKEELKI SLARLLVPAY GSFIGRFQNL GDIGKNADKY
601: IKYGVEDIEA RINELFKGTT TGRK
Arabidopsis Description
EXO70B1Exocyst complex component EXO70B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGH9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.