Factsheet for HORVU7Hr1G054020.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	nucleus

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G259600.1	Wheat	cytosol, nucleus, plastid	95.23	96.21
TraesCS7D01G260600.1	Wheat	cytosol	94.72	92.98
TraesCS7B01G157600.1	Wheat	cytosol, nucleus, plastid	95.4	92.72
Os08t0530300-01	Rice	plasma membrane	73.59	71.29
EES15315	Sorghum	cytosol	69.68	68.28
Zm00001d031614_P001	Maize	cytosol	67.8	66.22
HORVU3Hr1G094570.3	Barley	cytosol	47.53	41.58
HORVU2Hr1G069050.1	Barley	cytosol	36.63	41.35
HORVU7Hr1G028060.3	Barley	cytosol	45.14	39.85
VIT_17s0000g01450.t01	Wine grape	cytosol	42.93	38.36
GSMUA_Achr10P...	Banana	cytosol	41.74	38.1
KRH03960	Soybean	nucleus	42.59	37.54
KRH57228	Soybean	cytosol	42.25	37.18
PGSC0003DMT400090181	Potato	cytosol	41.91	36.88
Bra014060.1-P	Field mustard	plastid	41.91	36.72
CDY05812	Canola	cytosol, plastid	41.74	36.57
Solyc03g111320.1.1	Tomato	cytosol	41.4	36.54
AT5G50380.1	Thale cress	nucleus	42.42	36.46
CDX71629	Canola	cytosol	41.4	36.38
HORVU3Hr1G073910.1	Barley	cytosol	31.18	30.55
HORVU3Hr1G073850.1	Barley	cytosol, nucleus, peroxisome	31.18	30.3
HORVU5Hr1G062200.3	Barley	cytosol	35.6	29.73
HORVU1Hr1G070390.1	Barley	cytosol, mitochondrion	32.03	27.17
HORVU4Hr1G021040.3	Barley	mitochondrion	29.13	26.19
HORVU3Hr1G088110.3	Barley	cytosol, plastid	29.81	25.22
HORVU4Hr1G020050.1	Barley	cytosol, plastid	30.32	25.14
HORVU2Hr1G123350.29	Barley	cytosol	23.17	25.09
HORVU7Hr1G064400.2	Barley	cytosol	28.79	24.01
HORVU2Hr1G123320.1	Barley	cytosol	28.62	23.43
HORVU5Hr1G040140.3	Barley	cytosol	23.85	23.37
HORVU5Hr1G039240.1	Barley	plastid	25.38	20.47

Protein Annotations

EnsemblPlants:HORVU7Hr1G054020.2	EnsemblPlantsGene:HORVU7Hr1G054020	Gene3D:1.20.1280.170	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF45	PFAM:PF03081	SEG:seg
SUPFAM:SSF74788	UniParc:UPI000B47DCF9	UniProt:A0A287WJ93	MapMan:22.6.3.1	:	:

Description

No Description!

Coordinates

chrchr7H:-:213855291..213857668

Molecular Weight (calculated)

64444.3 Da

IEP (calculated)

4.753

GRAVY (calculated)

-0.271

Length

587 amino acids

Sequence
(BLAST)

001: MAVSKNAADD MMRVLSIYDA RLLPTSPPAE GQATGEAYGC DERDEGEQEQ KEEEEAFAAA EDVIRRCNSS SSSSGMIDYL YAVDDALPAA ALQGGLASRA
101: AEAVQAAMPR LEEEARALLC SSSARRLSLS SDDLDDAATP PDASPRLPRL SPRAAASVRG VADRMLRAGY GPELAQVYVT ARRDALAEAV AHQLGAAEPV
201: AIEEVLRMEW LVLDQKMRRW NHAIRVVVRT LLAGERRLCD EVFASDEELG HECFADVSRG CVLQLLGFAD AVAMSARATE KLYRTLGMYE ALADVAPELE
301: ALFTGDAREL FGAEVSAVAA RLGSTVRRTI EEFGSAIQGE SSRRPVQGGE IHPMNRYVIN YCGLLADCRS TLDMILVDTA DAVDGDEAPS GGGGATSTPS
401: GRCMLELLTG LLRKMDEKSC LYDDAGLKHI FLMNNLYYIV QKVMDSPLRE LLGDDWIRRH RGQIRQYETG YLRASWITVL SFLRDDGGSA APTVKDKARS
501: FNAAFEELYR NQTAWKVIDP QLREELRIAV SERLIPAYRS FLSRPRPQTG SSSGGSRHSA SKHVKYTLED LEDYMLDFFE GVQKLVK

Best Arabidopsis Sequence Match ( AT1G54090.1 )
(BLAST)

001: MATPETRGVD SDLETAEKII LRWDSTTSEE AKENLIFQSG GDREEVDRYL KAVDEVQRHI SSISISDEVK ATIQIAMARL EDELRNILIS QTSTFEPDSL
101: LLDSSLSSSS FASSSRTELE DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD LRSIAQRMIG AGYSRECVQV
201: YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK
301: LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC
401: RGLKCTNDRN DPDMDISELE GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD KYLRKLTGIF RQAATKYQRA
501: TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN
601: LETAVLDFFE GYTTAPHLRR SQ

Arabidopsis Description

ATEXO70D2At1g54090 [Source:UniProtKB/TrEMBL;Acc:Q9SYG5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.