Factsheet for HORVU4Hr1G020050.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G208500.1	Wheat	cytosol	93.64	93.64
TraesCS4D01G109600.1	Wheat	cytosol	93.22	92.96
TraesCS4B01G112100.1	Wheat	cytosol	91.95	91.69
Os11t0167600-00	Rice	plasma membrane	73.87	75.58
Zm00001d004846_P001	Maize	cytosol, plastid	72.03	74.56
EES08037	Sorghum	cytosol, plastid	71.89	74.09
Zm00001d053192_P001	Maize	cytosol, plastid	71.47	74.08
CDX97230	Canola	cytosol	16.24	60.85
CDX69666	Canola	cytosol	16.1	60.32
GSMUA_Achr6P07200_001	Banana	nucleus	49.58	53.1
HORVU5Hr1G039240.1	Barley	plastid	53.25	51.79
Bra023443.1-P	Field mustard	cytosol	31.36	50.92
GSMUA_Achr6P18090_001	Banana	nucleus	30.65	47.07
GSMUA_Achr6P25750_001	Banana	endoplasmic reticulum	45.34	45.79
VIT_01s0146g00160.t01	Wine grape	nucleus	42.09	45.57
PGSC0003DMT400006075	Potato	cytosol	35.88	42.91
Solyc05g024340.1.1	Tomato	cytosol	35.59	42.57
PGSC0003DMT400052043	Potato	nucleus	41.67	42.26
CDY69943	Canola	cytosol	36.02	40.67
Bra006183.1-P	Field mustard	nucleus	35.88	40.51
CDX78509	Canola	nucleus	35.88	40.51
Solyc02g094370.1.1	Tomato	cytosol	40.25	39.92
KRH70050	Soybean	nucleus	39.83	39.77
PGSC0003DMT400013431	Potato	nucleus	37.29	39.76
Solyc01g009880.2.1	Tomato	nucleus	37.15	39.61
Bra008852.1-P	Field mustard	nucleus	35.88	39.56
CDX69615	Canola	cytosol, nucleus, plastid	38.28	39.56
CDY09840	Canola	cytosol, nucleus, plastid	38.28	39.5
Bra008789.1-P	Field mustard	cytosol, nucleus, plastid	37.99	39.39
AT5G13150.1	Thale cress	nucleus	36.16	39.2
KRH06895	Soybean	cytosol	39.41	39.13
CDX78551	Canola	nucleus	37.57	39.06
CDX70532	Canola	nucleus	37.43	38.86
AT5G13990.1	Thale cress	nucleus	37.99	38.7
KRG94595	Soybean	nucleus	38.84	38.68
Bra006228.1-P	Field mustard	nucleus	37.15	38.62
CDX85618	Canola	nucleus	37.71	38.25
KRH36360	Soybean	cytosol	31.92	37.36
CDX91088	Canola	cytosol, nucleus, vacuole	36.86	33.81
KRG93132	Soybean	cytosol	21.05	31.7
HORVU2Hr1G069050.1	Barley	cytosol	23.16	31.54
HORVU7Hr1G054020.2	Barley	plasma membrane	25.14	30.32
HORVU7Hr1G028060.3	Barley	cytosol	26.55	28.27
HORVU3Hr1G094570.3	Barley	cytosol	26.55	28.02
HORVU5Hr1G062200.3	Barley	cytosol	27.26	27.45
HORVU3Hr1G073850.1	Barley	cytosol, nucleus, peroxisome	23.02	26.99
HORVU4Hr1G021040.3	Barley	mitochondrion	24.86	26.95
HORVU3Hr1G073910.1	Barley	cytosol	22.74	26.88
GSMUA_Achr10P...	Banana	cytosol	29.52	26.86
HORVU1Hr1G070390.1	Barley	cytosol, mitochondrion	25.71	26.3
HORVU3Hr1G088110.3	Barley	cytosol, plastid	25.71	26.22
HORVU7Hr1G064400.2	Barley	cytosol	25.0	25.14
HORVU5Hr1G040140.3	Barley	cytosol	20.9	24.71
HORVU2Hr1G123320.1	Barley	cytosol	24.72	24.41
HORVU2Hr1G123350.29	Barley	cytosol	17.66	23.06

Protein Annotations

EnsemblPlants:HORVU4Hr1G020050.1	EnsemblPlantsGene:HORVU4Hr1G020050	Gene3D:1.20.1280.170	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF81	PFAM:PF03081	SEG:seg
SUPFAM:SSF74788	UniParc:UPI0002969541	UniProt:M0XXI9	MapMan:22.6.3.1	:	:

Description

No Description!

Coordinates

chrchr4H:+:97580009..97582575

Molecular Weight (calculated)

77282.5 Da

IEP (calculated)

5.040

GRAVY (calculated)

-0.336

Length

708 amino acids

Sequence
(BLAST)

001: MERIPIPIAM LPQKSSSFSQ ATIREEKLGR NLSLGAIKLN EHIERVKKDA AEAAGDKKAA AGGGEGGPAD GETPELPPYE EPDLAELSAE VEAYLASRDG
101: DAPLSISEVT LDRFASAVEV EIAQSEGEED KWALREDGEQ PLLLAAIKRV VTLASVLTAS GGGNGTEGAV RYTIGVHRVT GVLHRSMTFL EDELHALLED
201: PRLGKTSNAS ESGSASAKSM KRPPSFGQGG DPDRSVVPST EGGTGGDDAS QPFPPETVDH LRAMVDVMIT AGYETECTQV FLVARRNALD ATMQGLGYEK
301: ASIDDVVKMA WEGLESEIGT WIKAFRHIVN VGLSAERDLC VRVFAGRNAG LGRDIFADLA RCAMLQMFNF TEAVAMTKRA AEKLFKVLDM YEAIRDGAPV
401: VDAFISVHKT EAGENPDGNS SGAEALADLK AELASVRSRL GESAAAIFCD LESSIRADAG KQPVPGGAVH PLTRYLMNYL KYACEYKNTL EQVFREFHRP
501: DADDAPGHDG ESNPFAAQLM EVMELLHGNL EAKSRLYKDL ALSSIFLMNN GRYMLQKIRG SPEINAVVGE AWARKRSTDL RQYHKNYQRE TWGRVLNVLR
601: DDGVITVKGH VQKPVLKERF KQFNAAMDEI QRTQGAWVVS DEQLQSELRV SIAAVVVPAY RSFLGRFAQH FTAGRQTEKY IKLSADDLEG IIEELFEGSA
701: GSMTRRRN

Best Arabidopsis Sequence Match ( AT5G13990.1 )
(BLAST)

001: MEKNDKDPDH DDKSKGDEKG DVVSDAHPSD DAHHQDGISN ENVDVVGNAE TDHQDPGDNN VDKVSQGEEA PEIRQTLESL SEELDQFLPT LSLHMEEHKD
101: STEEKGEDGY FQIPQFVGKF LDLFEEKLSK YDSGEPKTVW YQDPEEVSSL LEAVDRVSKL MGLLLNTKSC LDHHESLINH AGSIQQRAMA FLEDEFRIIL
201: EESVTKESVV VTDDSNSQRR STADQQDHQN DVVVSQDHDQ MLVPECGDQE IEYPGYPEDV VVVLRKIAEK MKAGGYGWEC REVYLVGRRN ILMRTLKQDC
301: EFEKVSIDEV QKMSWDTLER EIPIWNKTFK DCSSLFFPGE LKLAERIFPG DEGNLFCIVT HGLAIQFLGF AEAVAMTRRS TEKLFKILDI YETLRDSFPA
401: MEELFPEELR SELRNEVTSA RSRLGETAIH IFCDLEHSIK SDSSKTPVPG GAVHPLTRYT MNYLKYSCEY KDTLEQVFKS HSKMEREEEE PVESGNSAFA
501: SQLMRIMELL DGNLETKSKQ YKDIPLSCIF MMNNGRYIVQ KIKGSAEIHE VMGDTWCRRR SSELRNYHKN YQRETWGKLL GFLGHEGLMH NGKIVKPNLK
601: ERFKSFNATF DEIHKTQTTW VVNDEQLQSE LRVSITAVMI PAYRAFMARF GQYLDPGRQT EKYVKYQPED IEDLIDQLFE GNTSSSSTAT ARRRT

Arabidopsis Description

ATEXO70C2EXO70C2 [Source:UniProtKB/TrEMBL;Acc:A0A178UPG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.