Factsheet for Bra006228.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78551	Canola	nucleus	98.97	98.97
Bra023443.1-P	Field mustard	cytosol	55.95	87.39
AT5G13990.1	Thale cress	nucleus	84.14	82.45
Bra008789.1-P	Field mustard	cytosol, nucleus, plastid	82.53	82.28
Os12t0165600-01	Rice	cytosol, plasma membrane	33.77	47.03
KRH70050	Soybean	nucleus	48.16	46.26
KRH06895	Soybean	cytosol	47.43	45.3
KRG94595	Soybean	nucleus	46.84	44.87
Bra008852.1-P	Field mustard	nucleus	41.56	44.08
Bra006183.1-P	Field mustard	nucleus	40.53	44.02
PGSC0003DMT400052043	Potato	nucleus	44.35	43.27
GSMUA_Achr6P07200_001	Banana	nucleus	40.97	42.21
Solyc02g094370.1.1	Tomato	cytosol	44.05	42.02
GSMUA_Achr6P25750_001	Banana	endoplasmic reticulum	41.26	40.09
TraesCS5B01G122500.1	Wheat	plastid	38.18	39.27
Zm00001d023513_P001	Maize	plastid	38.47	38.36
TraesCS4B01G112100.1	Wheat	cytosol	39.65	38.03
Zm00001d041908_P001	Maize	plastid	37.59	37.81
Zm00001d053192_P001	Maize	cytosol, plastid	37.59	37.48
Bra020368.1-P	Field mustard	cytosol	26.28	37.45
EES16704	Sorghum	plastid	38.33	37.39
TraesCS4D01G109600.1	Wheat	cytosol	38.91	37.32
TraesCS4A01G208500.1	Wheat	cytosol	38.77	37.29
Zm00001d004846_P001	Maize	cytosol, plastid	37.44	37.28
HORVU4Hr1G020050.1	Barley	cytosol, plastid	38.62	37.15
Os11t0167600-00	Rice	plasma membrane	37.44	36.85
EES08037	Sorghum	cytosol, plastid	36.71	36.39
TraesCS5D01G130800.1	Wheat	plastid	37.89	35.83
TraesCS5A01G122400.1	Wheat	mitochondrion	38.18	35.18
GSMUA_Achr6P18090_001	Banana	nucleus	23.49	34.71
Bra006767.1-P	Field mustard	cytosol	29.66	32.69
Bra003879.1-P	Field mustard	cytosol, nucleus, plastid	27.75	31.55
Bra030907.1-P	Field mustard	cytosol	29.07	31.28
Bra028829.1-P	Field mustard	cytosol	14.68	30.96
Bra027373.1-P	Field mustard	cytoskeleton, cytosol, nucleus	28.05	30.91
Bra025399.1-P	Field mustard	cytosol	22.32	30.46
Bra015543.1-P	Field mustard	cytosol	26.43	30.15
Bra009523.1-P	Field mustard	cytosol	27.61	29.47
HORVU5Hr1G039240.1	Barley	plastid	31.28	29.26
Bra014060.1-P	Field mustard	plastid	28.34	28.81
Bra022586.1-P	Field mustard	cytosol	25.55	27.53
Bra012987.1-P	Field mustard	cytosol	21.73	26.91
Bra033104.1-P	Field mustard	cytosol	24.96	26.32
Bra006696.1-P	Field mustard	cytosol	21.73	23.87
Bra020294.1-P	Field mustard	cytosol, plastid	21.29	23.35
Bra029772.1-P	Field mustard	cytosol	20.85	23.13
Bra018685.1-P	Field mustard	cytosol, nucleus, plastid	19.24	22.66
Bra035682.1-P	Field mustard	mitochondrion, plastid	19.82	22.5
Bra017078.1-P	Field mustard	cytosol	18.36	22.48
Bra002537.1-P	Field mustard	cytosol, nucleus, plastid	20.7	22.45
Bra005044.1-P	Field mustard	cytosol, nucleus, plastid	18.8	22.3
Bra001305.1-P	Field mustard	mitochondrion	20.12	22.1
Bra014771.1-P	Field mustard	plastid	20.26	21.84
Bra007146.1-P	Field mustard	plastid	19.82	21.46
Bra034072.1-P	Field mustard	mitochondrion	18.94	21.22
Bra005045.1-P	Field mustard	plastid	20.12	21.14
GSMUA_Achr10P...	Banana	cytosol	23.64	20.69
Bra005046.1-P	Field mustard	plastid	20.12	20.39

Protein Annotations

Gene3D:1.20.1280.170	MapMan:22.6.3.1	EnsemblPlantsGene:Bra006228	EnsemblPlants:Bra006228.1	EnsemblPlants:Bra006228.1-P	ncoils:Coil
InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	UniProt:M4CPT9
PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF82	SUPFAM:SSF74788	UniParc:UPI000253FB33	SEG:seg

Description

AT5G13990 (E=5e-301) ATEXO70C2 | ATEXO70C2 (exocyst subunit EXO70 family protein C2); protein binding

Coordinates

chrA03:-:2615276..2617321

Molecular Weight (calculated)

78104.6 Da

IEP (calculated)

4.594

GRAVY (calculated)

-0.708

Length

681 amino acids

Sequence
(BLAST)

001: MEKNDDKDPD LHHDDDHNDK SKEEEKGDTV SDDVDVDKKE NVDVSNAETD HVDPGDNADK VNSPLGQEEA PPEIPQTIES LSEELDQLLT SLSLHKEEHK
101: DVTEEEKGED GNYFQIPQFV GKFLDLFEDK LSKHDTVDPK TTWYQDPEEV SSLLEAVDRV SKLMELLLNT KSCLDHHESL INHAGSIQQR AMALFEDEFR
201: VLLEESVIKE PAVVTEDQQD HHNDSQDQDN VNNVPEGGDE KIEYPGYSEE MVVLLRKIVE RMKGAGYGCE CKEAYLVGRR NILMRTLKQE CEFEKVSIDE
301: VQKMSWGELE REIPIWNKTV KDCSSLFFPG ELKLAEKIFP GDEGSLFNIV THGLAIQFLG FAEAVAMTRR STEKLFKILD IYETLRDGFP AIEELFTEEL
401: RSELRSEVTS ARSRLGETAI NIFSDLENSI KSDSSKTPVP GGAVHPLTRY TMNYLKYSCE YKGTLEQVFK SHSKMEEEES TERAFANQLM RIMDLLDGNM
501: EAKSKLYKDI PLSCIFMMNN GRYIVQKIKG SAEIHEVMGD TWCRKRSSEL RTYHKNYQRE TWGKLLGFLG HEGLMHNNKI VKPNLKERFK SFNATFDEIH
601: KTQTTWVVND EQLQSELRVS ITAVMIPAYR AFMARFGQYL DPGRQTEKYV KYQPEDIEDL IDQLFEGNTS SSSTATAKRR T

Best Arabidopsis Sequence Match ( AT5G13990.1 )
(BLAST)

001: MEKNDKDPDH DDKSKGDEKG DVVSDAHPSD DAHHQDGISN ENVDVVGNAE TDHQDPGDNN VDKVSQGEEA PEIRQTLESL SEELDQFLPT LSLHMEEHKD
101: STEEKGEDGY FQIPQFVGKF LDLFEEKLSK YDSGEPKTVW YQDPEEVSSL LEAVDRVSKL MGLLLNTKSC LDHHESLINH AGSIQQRAMA FLEDEFRIIL
201: EESVTKESVV VTDDSNSQRR STADQQDHQN DVVVSQDHDQ MLVPECGDQE IEYPGYPEDV VVVLRKIAEK MKAGGYGWEC REVYLVGRRN ILMRTLKQDC
301: EFEKVSIDEV QKMSWDTLER EIPIWNKTFK DCSSLFFPGE LKLAERIFPG DEGNLFCIVT HGLAIQFLGF AEAVAMTRRS TEKLFKILDI YETLRDSFPA
401: MEELFPEELR SELRNEVTSA RSRLGETAIH IFCDLEHSIK SDSSKTPVPG GAVHPLTRYT MNYLKYSCEY KDTLEQVFKS HSKMEREEEE PVESGNSAFA
501: SQLMRIMELL DGNLETKSKQ YKDIPLSCIF MMNNGRYIVQ KIKGSAEIHE VMGDTWCRRR SSELRNYHKN YQRETWGKLL GFLGHEGLMH NGKIVKPNLK
601: ERFKSFNATF DEIHKTQTTW VVNDEQLQSE LRVSITAVMI PAYRAFMARF GQYLDPGRQT EKYVKYQPED IEDLIDQLFE GNTSSSSTAT ARRRT

Arabidopsis Description

ATEXO70C2EXO70C2 [Source:UniProtKB/TrEMBL;Acc:A0A178UPG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.