Factsheet for TraesCS4D01G109600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G208500.1	Wheat	cytosol	97.75	98.02
TraesCS4B01G112100.1	Wheat	cytosol	97.46	97.46
HORVU4Hr1G020050.1	Barley	cytosol, plastid	92.96	93.22
Os11t0167600-00	Rice	plasma membrane	73.1	75.0
Zm00001d004846_P001	Maize	cytosol, plastid	70.28	72.95
EES08037	Sorghum	cytosol, plastid	70.56	72.93
Zm00001d053192_P001	Maize	cytosol, plastid	69.15	71.89
TraesCS5D01G130800.1	Wheat	plastid	60.85	60.0
CDX97230	Canola	cytosol	15.92	59.79
CDX69666	Canola	cytosol	15.77	59.26
GSMUA_Achr6P07200_001	Banana	nucleus	48.17	51.74
Bra023443.1-P	Field mustard	cytosol	31.55	51.38
VIT_01s0146g00160.t01	Wine grape	nucleus	42.11	45.72
GSMUA_Achr6P18090_001	Banana	nucleus	29.58	45.55
GSMUA_Achr6P25750_001	Banana	endoplasmic reticulum	44.65	45.22
PGSC0003DMT400006075	Potato	cytosol	35.49	42.57
Solyc05g024340.1.1	Tomato	cytosol	35.21	42.23
PGSC0003DMT400052043	Potato	nucleus	40.99	41.69
CDY69943	Canola	cytosol	35.63	40.35
PGSC0003DMT400013431	Potato	nucleus	37.61	40.21
Bra006183.1-P	Field mustard	nucleus	35.49	40.19
CDX78509	Canola	nucleus	35.49	40.19
Solyc01g009880.2.1	Tomato	nucleus	37.46	40.06
CDX69615	Canola	cytosol, nucleus, plastid	38.45	39.85
CDY09840	Canola	cytosol, nucleus, plastid	38.45	39.8
KRH70050	Soybean	nucleus	39.72	39.77
Bra008789.1-P	Field mustard	cytosol, nucleus, plastid	38.17	39.68
Bra008852.1-P	Field mustard	nucleus	35.77	39.56
Solyc02g094370.1.1	Tomato	cytosol	39.58	39.36
CDX78551	Canola	nucleus	37.75	39.35
CDX70532	Canola	nucleus	37.61	39.15
AT5G13990.1	Thale cress	nucleus	38.31	39.14
Bra006228.1-P	Field mustard	nucleus	37.32	38.91
AT5G13150.1	Thale cress	nucleus	35.77	38.9
KRH06895	Soybean	cytosol	38.87	38.71
CDX85618	Canola	nucleus	38.03	38.68
KRG94595	Soybean	nucleus	38.59	38.54
KRH36360	Soybean	cytosol	31.97	37.52
CDX91088	Canola	cytosol, nucleus, vacuole	37.32	34.33
KRG93132	Soybean	cytosol	21.13	31.91
TraesCS1D01G029000.1	Wheat	cytosol	22.96	30.35
TraesCS7D01G290600.1	Wheat	cytosol	27.18	30.02
TraesCS5D01G218900.1	Wheat	cytosol	24.79	29.28
TraesCS7D01G260600.1	Wheat	cytosol	24.65	29.26
TraesCS3D01G424900.1	Wheat	cytosol	26.48	28.31
TraesCS3D01G341800.1	Wheat	cytosol	25.49	28.06
TraesCS1D01G293400.1	Wheat	cytosol	25.63	27.83
TraesCS7D01G133800.1	Wheat	cytosol	26.2	27.6
TraesCS2D01G280500.1	Wheat	nucleus	26.48	27.53
TraesCS2D01G596000.1	Wheat	cytosol, mitochondrion, nucleus	24.37	27.16
TraesCS3D01G299200.1	Wheat	peroxisome	22.54	26.71
GSMUA_Achr10P...	Banana	cytosol	29.01	26.48
TraesCS4D01G112900.1	Wheat	cytosol, mitochondrion	24.08	26.47
TraesCS5D01G133200.1	Wheat	cytosol	22.54	24.81
TraesCS2D01G596100.1	Wheat	cytosol	19.86	22.14

Protein Annotations

EnsemblPlants:TraesCS4D01G109600.1	EnsemblPlantsGene:TraesCS4D01G109600	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	InterPro:Cullin_repeat-like_dom_sf
InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF81	PFAM:PF03081	SEG:seg	SUPFAM:SSF74788
MapMan:22.6.3.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:88904679..88906811

Molecular Weight (calculated)

77035.2 Da

IEP (calculated)

5.191

GRAVY (calculated)

-0.336

Length

710 amino acids

Sequence
(BLAST)

001: MERIPIPIAM LPQKSSSFSQ ATIREEKLGR NLSLGAIKLN EHIERAKKDA AEAAGDKKAA AGGGEGGPAD GSGVGETPEP PPHEEPDLAE LSAEVDAFLA
101: SRDGDAPLSI SEVTLDRFAS AVEVEIAQSE GEEGKWALGE GGEQPLILAA IKRIVTLASA LTATGGGNGT EGAVKYTIGV HRVTGVLHRS MTFLEDELHA
201: LLEDPCLAKT HKASESGSAT AKSMKRPPSF GQGGDPDRSV VPPTEGGSAG DDASQSQPFP AETVDHLRAM AEVMITAGYE TECTQVFLVA RRNALDATMQ
301: SLGYEKASID DVVRMAWEGL ESEIGTWIKA YRHILNAGLS AEHDLCVRVF VGRNAGLGRD IFADLARCAM LQMFNFTEAV AMTKRAAEKL FKVLDMYEAI
401: RDGAPVVDGF ISTNKAEGGE NSSGAEALAD LKSELASVRS RLGESAAAIF CDLESSIRAD AGKQPVPGGA VHPLTRYLMN YLKYACEYKN TLEQVFREFH
501: RPDADDSPGH EGESNPFAAQ LMEVMELLHG SLEAKSKLYK DLALSSIFLM NNGRYMLQKI RGSPEINAVV GEAWARKRST DLRQYHKNYQ RETWGRVLNV
601: LRDDGGITVK GHVQKPVLKE RFKQFNAAMD EIQRTQGAWV VSDEQLQSEL RVSITAVVVP AYRSFLGRFA QHFTAGRQTE KYIKLSADDL EGIIEELFEG
701: SAGSMSRRRN

Best Arabidopsis Sequence Match ( AT5G13990.1 )
(BLAST)

001: MEKNDKDPDH DDKSKGDEKG DVVSDAHPSD DAHHQDGISN ENVDVVGNAE TDHQDPGDNN VDKVSQGEEA PEIRQTLESL SEELDQFLPT LSLHMEEHKD
101: STEEKGEDGY FQIPQFVGKF LDLFEEKLSK YDSGEPKTVW YQDPEEVSSL LEAVDRVSKL MGLLLNTKSC LDHHESLINH AGSIQQRAMA FLEDEFRIIL
201: EESVTKESVV VTDDSNSQRR STADQQDHQN DVVVSQDHDQ MLVPECGDQE IEYPGYPEDV VVVLRKIAEK MKAGGYGWEC REVYLVGRRN ILMRTLKQDC
301: EFEKVSIDEV QKMSWDTLER EIPIWNKTFK DCSSLFFPGE LKLAERIFPG DEGNLFCIVT HGLAIQFLGF AEAVAMTRRS TEKLFKILDI YETLRDSFPA
401: MEELFPEELR SELRNEVTSA RSRLGETAIH IFCDLEHSIK SDSSKTPVPG GAVHPLTRYT MNYLKYSCEY KDTLEQVFKS HSKMEREEEE PVESGNSAFA
501: SQLMRIMELL DGNLETKSKQ YKDIPLSCIF MMNNGRYIVQ KIKGSAEIHE VMGDTWCRRR SSELRNYHKN YQRETWGKLL GFLGHEGLMH NGKIVKPNLK
601: ERFKSFNATF DEIHKTQTTW VVNDEQLQSE LRVSITAVMI PAYRAFMARF GQYLDPGRQT EKYVKYQPED IEDLIDQLFE GNTSSSSTAT ARRRT

Arabidopsis Description

ATEXO70C2EXO70C2 [Source:UniProtKB/TrEMBL;Acc:A0A178UPG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.