Factsheet for Solyc05g024340.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400006075	Potato	cytosol	95.78	95.78
CDX97230	Canola	cytosol	21.79	68.25
CDX69666	Canola	cytosol	21.45	67.2
Solyc01g009880.2.1	Tomato	nucleus	65.54	58.43
VIT_01s0146g00160.t01	Wine grape	nucleus	54.56	49.39
Os12t0165600-01	Rice	cytosol, plasma membrane	38.18	46.22
Bra006183.1-P	Field mustard	nucleus	46.96	44.34
CDY69943	Canola	cytosol	46.96	44.34
CDX78509	Canola	nucleus	46.79	44.18
KRH36360	Soybean	cytosol	43.92	42.98
AT5G13150.1	Thale cress	nucleus	47.13	42.73
Bra008852.1-P	Field mustard	nucleus	45.95	42.37
GSMUA_Achr6P07200_001	Banana	nucleus	45.78	41.0
TraesCS5B01G122500.1	Wheat	plastid	43.58	38.97
GSMUA_Achr6P25750_001	Banana	endoplasmic reticulum	45.61	38.52
Solyc02g094370.1.1	Tomato	cytosol	46.45	38.52
Zm00001d023513_P001	Maize	plastid	43.75	37.92
Zm00001d041908_P001	Maize	plastid	42.91	37.52
Zm00001d004846_P001	Maize	cytosol, plastid	42.74	36.99
EES16704	Sorghum	plastid	43.58	36.96
Zm00001d053192_P001	Maize	cytosol, plastid	42.57	36.9
KRG93132	Soybean	cytosol	28.72	36.17
EES08037	Sorghum	cytosol, plastid	41.72	35.95
Os11t0167600-00	Rice	plasma membrane	41.89	35.84
TraesCS4B01G112100.1	Wheat	cytosol	42.74	35.63
HORVU4Hr1G020050.1	Barley	cytosol, plastid	42.57	35.59
TraesCS5D01G130800.1	Wheat	plastid	42.91	35.28
TraesCS4D01G109600.1	Wheat	cytosol	42.23	35.21
TraesCS4A01G208500.1	Wheat	cytosol	41.89	35.03
TraesCS5A01G122400.1	Wheat	mitochondrion	43.41	34.78
GSMUA_Achr6P18090_001	Banana	nucleus	26.01	33.41
Solyc06g062990.1.1	Tomato	cytosol	32.6	32.38
Solyc03g122240.2.1	Tomato	nucleus	30.41	30.72
Solyc08g066070.1.1	Tomato	cytosol	32.26	30.27
HORVU5Hr1G039240.1	Barley	plastid	36.15	29.4
Solyc03g111320.1.1	Tomato	cytosol	30.91	27.52
Solyc10g081940.1.1	Tomato	cytosol	29.05	26.88
Solyc04g009740.2.1	Tomato	nucleus	28.89	26.27
Solyc11g006620.1.1	Tomato	cytosol	28.89	25.99
Solyc03g115070.1.1	Tomato	cytosol	26.52	24.72
Solyc02g088800.1.1	Tomato	nucleus	26.86	24.13
Solyc06g005280.1.1	Tomato	plastid	23.65	23.41
Solyc11g073010.1.1	Tomato	plastid	25.0	23.34
Solyc06g075610.1.1	Tomato	plastid	24.16	22.95
Solyc05g054820.1.1	Tomato	plastid	23.99	22.02
Solyc09g005840.1.1	Tomato	plastid	23.14	21.54
Solyc09g005830.1.1	Tomato	plastid	22.97	21.32
GSMUA_Achr10P...	Banana	cytosol	26.69	20.31

Protein Annotations

EnsemblPlants:Solyc05g024340.1.1	EnsemblPlantsGene:Solyc05g024340.1	Gene3D:1.20.1280.170	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF15	PFAM:PF03081	SUPFAM:SSF74788
UniParc:UPI0002765ADC	UniProt:K4BZS1	MapMan:22.6.3.1	:	:	:

Description

No Description!

Coordinates

chr5:+:31197013..31198791

Molecular Weight (calculated)

67822.9 Da

IEP (calculated)

6.460

GRAVY (calculated)

-0.416

Length

592 amino acids

Sequence
(BLAST)

001: MDKSGATPIC DDIDLNRFKY TVSTSHDDDD PCSRLPENVE HFSKIIESRI AKCSSGETPT RLGKMTEEES FFLEAVMHLS KLTNVIAKSP SGSTLLSQTN
101: IVLKLAMTFM EEELRTLLED FGGNSNSKVV KKLQLEDYPW YPPEVVTRMN RIATTMISAG FETACCQVYS ISRRNAFYEQ MKMLEFEKIN VDDVQKMSWD
201: SLEAEITRWI NVARNCSNTL FLAERKLGES VFSQSPMISQ SLFNNLARSI VIQILDFAEA VSWTKRSAEK LFKYLDIYDA IRDLIHAISE SLSINDCEHE
301: LKSEILATRD RFGDAVINIF NDLEISIKND AARTPVPGGA VHPLTRYVMN YLKYACEYKD ALEHIFKEHN AMSPSKLKSS VDVAESESPH ENAVAETTPL
401: TAQLMTIMEL LDANLEVKSN LYRDTSLRDI FLMNNGRYIL QKAKGSTEVR QVMGDTWCRR RSTTVRQYHK NYQRETWGKL LQILNHDGMQ VNGKVTKPIV
501: KERFKNFSTM LDEIHRTQST WVVSDEQLRS ELRVSVSAVL IPAYRSFCGR FRQYLDNTKH ADKYIKYQPE DIETLVEGLF DGNPTSMARR KT

Best Arabidopsis Sequence Match ( AT5G13150.1 )
(BLAST)

001: MEKSGNHHHA NESSENHDHK SEDHENKQHS DELHSSTPES QSESSEHSLV EVMEAVVDFI QTLSSEKDPL GEISPAVESF PEAVDSLVSK MESSGLGRDE
101: TEDSVFIDAV NRISKSVMRL RELKLDSTPV SSWLNRASSV QHRAVSLLDE EFRHLLDRSR EEEKKNNNNN NHHDGSNSDH NNSSTNDSDR CVLQDHEEAE
201: EESFHDFSPE SISTLKKIAG AMISAGYEAE CCMSYEMSRR HAFKEELTEV GFEGINVEDV QRIGWESLEG EIASWISIVR RCSTVLFPGE LSLCNAVFPD
301: QDHSSVRKRL FTGLVSAVTI RFLDFSGAVV LTKRSSEKLF KFLDMYETLR DLIPAVEQSD SDLIQEIKLA QTRLGEAAVT IFGELEKSIK SDNGRTPVPS
401: GAVHPLTRYT MNYLKYACEY KETLDQVFQH YEANQTDNKP EPETKPRQQQ REDDEEYKVS AFARQMIRVM ELLDANLEIK SRLYRDPSLR FIFLMNNGRY
501: ILQKIKGSIE IRDLMGQSWT RKRSTELRQY HKSYQRETWG KVLQCMNQEG LQVNGKVSKP VLKERFKIFN AMFDEIHKTQ STWIVSDEQM QSELRVSISS
601: LVIPAYRSFF GRYKQHLDSG KQTDKYVKYQ PEDIESFIDD LFDGNPTSMA RKR

Arabidopsis Description

ATEXO70C1Exocyst subunit exo70 family protein C1 [Source:UniProtKB/TrEMBL;Acc:Q9FY95]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.