Factsheet for Solyc11g006620.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g009740.2.1	Tomato	nucleus	84.5	85.41
VIT_13s0073g00170.t01	Wine grape	cytosol	80.7	81.69
CDX70300	Canola	cytosol	76.6	79.75
KRH34637	Soybean	cytosol	77.66	79.72
KRG92152	Soybean	cytosol	78.27	79.48
Bra009523.1-P	Field mustard	cytosol	76.9	79.31
CDY10374	Canola	cytosol	76.75	79.15
AT5G03540.3	Thale cress	cytosol	77.66	76.96
Bra028829.1-P	Field mustard	cytosol	37.54	76.47
CDY10372	Canola	cytosol	34.35	75.33
KRG88728	Soybean	cytosol	74.47	75.15
Solyc10g081940.1.1	Tomato	cytosol	69.91	71.88
OQU82911	Sorghum	cytosol	52.74	71.69
Zm00001d052779_P001	Maize	cytosol, mitochondrion	68.39	70.98
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	63.22	70.87
Os11t0157400-01	Rice	plasma membrane	68.54	70.14
CDY44373	Canola	cytosol	59.42	69.45
HORVU4Hr1G021040.3	Barley	mitochondrion	68.84	69.37
TraesCS4B01G115200.1	Wheat	cytosol, mitochondrion	68.09	69.35
TraesCS4D01G112900.1	Wheat	cytosol, mitochondrion	67.93	69.19
TraesCS4A01G200100.3	Wheat	cytosol, mitochondrion	68.09	68.82
Os12t0159700-00	Rice	plasma membrane	64.89	66.3
GSMUA_Achr5P26180_001	Banana	cytosol	65.65	66.26
KRG90170	Soybean	cytosol	37.39	65.95
EES13134	Sorghum	cytosol	62.92	65.51
Os04t0685600-01	Rice	plasma membrane	62.77	65.14
Zm00001d001765_P001	Maize	mitochondrion	62.61	64.27
TraesCS2B01G602800.1	Wheat	mitochondrion	61.55	63.58
TraesCS2D01G596000.1	Wheat	cytosol, mitochondrion, nucleus	61.55	63.58
TraesCS2A01G583800.2	Wheat	cytosol, mitochondrion, nucleus	61.4	63.42
GSMUA_Achr2P20450_001	Banana	plastid	62.77	61.83
TraesCS5D01G133200.1	Wheat	cytosol	55.62	56.74
TraesCS5A01G125500.1	Wheat	cytosol, mitochondrion	54.86	56.67
HORVU2Hr1G123320.1	Barley	cytosol	61.55	56.49
HORVU5Hr1G040140.3	Barley	cytosol	51.22	56.26
Zm00001d023472_P001	Maize	cytosol	53.04	55.66
KXG23006	Sorghum	cytosol	52.43	54.68
Zm00001d023469_P001	Maize	cytosol	50.15	48.89
TraesCS2D01G596100.1	Wheat	cytosol	45.14	46.62
TraesCS2A01G583700.1	Wheat	cytosol, plastid	44.98	46.61
HORVU2Hr1G123350.29	Barley	cytosol	38.3	46.49
TraesCS2B01G602900.1	Wheat	plastid	44.38	45.98
Os04t0685500-02	Rice	cytosol	37.69	45.76
Solyc06g062990.1.1	Tomato	cytosol	30.55	33.72
Solyc03g111320.1.1	Tomato	cytosol	33.43	33.08
Solyc08g066070.1.1	Tomato	cytosol	31.46	32.81
Solyc03g122240.2.1	Tomato	nucleus	29.18	32.76
Solyc02g088800.1.1	Tomato	nucleus	29.64	29.59
Solyc05g024340.1.1	Tomato	cytosol	25.99	28.89
Solyc06g005280.1.1	Tomato	plastid	25.53	28.09
Solyc11g073010.1.1	Tomato	plastid	26.75	27.76
Solyc09g005840.1.1	Tomato	plastid	25.84	26.73
Solyc06g075610.1.1	Tomato	plastid	25.23	26.65
Solyc09g005830.1.1	Tomato	plastid	25.68	26.49
Solyc03g115070.1.1	Tomato	cytosol	25.53	26.46
Solyc01g009880.2.1	Tomato	nucleus	26.6	26.36
Solyc05g054820.1.1	Tomato	plastid	25.23	25.74
Solyc02g094370.1.1	Tomato	cytosol	26.9	24.79

Protein Annotations

EnsemblPlants:Solyc11g006620.1.1	EnsemblPlantsGene:Solyc11g006620.1	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	InterPro:Cullin_repeat-like_dom_sf
InterPro:Exo70	ncoils:Coil	PANTHER:PTHR12542	PANTHER:PTHR12542:SF78	PFAM:PF03081	SEG:seg
SUPFAM:SSF74788	UniParc:UPI0002769F42	UniProt:K4D4S3	MapMan:22.6.3.1	:	:

Description

No Description!

Coordinates

chr11:+:1223086..1234198

Molecular Weight (calculated)

75047.9 Da

IEP (calculated)

8.220

GRAVY (calculated)

-0.474

Length

658 amino acids

Sequence
(BLAST)

001: MGILPRNRGG EGGMVVVDML SERATMMRES VQKSQSITDN MVSILGSFDH RLSALETAMR PTQIRTHAIR KAHENIDRTL KAADVILSQF DLSRQAEAKI
101: LKGPHEDLES YLEAIEQLRN NIRFFNNNKS FKSSDGVLNN ANSLLAKAIS KLEDEFKQLL SSYSKPVEPE RLFECLPTSM RPSTGSPGDQ DSSSKNHLPS
201: SHGEHNHGTD DTVYTPPALI PPRILPLLHD LSQQMVQAGH QQQLVKIYRE VRFPVLEESL RKLGVEKLSK DDVQKMQWEV LEFKIGNWIH YMRIAVKLLF
301: AAERKVCDQM FEGFEQIKDQ CFADVTTGSV AMLLSFGDAI AKSKRSPEKL FVLLDMYEIM RELHTEIELL FRGKSCNEIR ESAFGLSKRL AQTAQETFRD
401: FEEAVEKDAT KTAVSDGTVH PLTSYVINYV KFLFDYQSTL KQLFQEFENG DSNSQLAAVT MRIMQALQTN LDGKSKQYKD PSLTNLFLMN NIHYMVRSVR
501: RSEAKDLLGD DWVQRHRRVV QQHANQYKRI AWAKILQCLS IQGLTSSGGS NSMGVDGQNS SGVSRALVKE RLKTFNIQFE DLHQRQSQWT VPDTELRESL
601: RLAVAEVLLP AYRSFIKRFG LMVESGKNPQ KYIRYSAEDL ERMLGEFFEG KTLNEPKR

Best Arabidopsis Sequence Match ( AT5G03540.1 )
(BLAST)

001: MAVDSRMDLL SERAVLMRAS LQKSQTITDN VVSILGSFDS RLSALETAMR PTQIRTHAIR KAHENIDRTL KAAEVILSQF DLLRQAETKV LKGPHEDLES
101: YLDAIAQLRK IIRYFMSNKS FKSSDGVLNH ANSLLAKAQS KLEEEFKQLL ASYSKAVEPD RLFDGLPNSL RPSSDGDGGG KPHGGHHNDD AETAAYTLPI
201: LIPSRVLPLL HDLAQQMVQA GHQQQLLQIY RDTRSFVLEE SLKKLGVEKL SKEDVQRMQW EVLEAKIGNW IHFMRIAVKL LFAGERQVCD QIFRGFDSLS
301: DQCFAEVTVS SVSMLLSFGD AIARSKRSPE KLFVLLDMYE IMRELHTEIE TIFKGKACLE IRDSATGLTK RLAQTAQETF GDFEEAVEKD ATKTAVLDGT
401: VHPLTSYVIN YVKFLFDYQT TLKQLFLEFG NGDDSNSQLA SVTMRIMQAL QNNLDGKSKQ YKDPALTHLF LMNNIHYMVR SVRRSEAKDL LGDDWVQRHR
501: RIVQQHANQY KRVAWTKILQ SSSAQGLTSS GGGSLEGGNS SGVSRGLLKE RFKMFNMQFD ELHQRQSQWT VPDTELRESL RLAVAEVLLP AYRSFLKRFG
601: PLVESGKNPQ KYIKYTAEDL ERLLGELFEG KSMNEPRR

Arabidopsis Description

ATEXO70A1Exocyst subunit exo70 family protein A1 [Source:UniProtKB/TrEMBL;Acc:F4KGM7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.