Factsheet for TraesCS4A01G200100.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G115200.1	Wheat	cytosol, mitochondrion	98.31	99.07
TraesCS4D01G112900.1	Wheat	cytosol, mitochondrion	97.7	98.45
HORVU4Hr1G021040.3	Barley	mitochondrion	96.47	96.17
OQU82911	Sorghum	cytosol	64.82	87.19
Zm00001d052779_P001	Maize	cytosol, mitochondrion	83.87	86.12
Os11t0157400-01	Rice	plasma membrane	84.64	85.69
VIT_08s0007g02340.t01	Wine grape	cytosol	71.74	72.07
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	64.98	72.06
PGSC0003DMT400043775	Potato	cytosol	62.06	70.63
VIT_13s0073g00170.t01	Wine grape	cytosol	70.51	70.62
Solyc04g009740.2.1	Tomato	nucleus	69.74	69.74
CDX70300	Canola	cytosol	67.43	69.46
CDY10374	Canola	cytosol	67.9	69.28
Bra009523.1-P	Field mustard	cytosol	67.74	69.12
AT5G52340.1	Thale cress	cytosol	66.51	68.62
KRH34637	Soybean	cytosol	67.43	68.49
TraesCS5A01G125500.1	Wheat	cytosol, mitochondrion	66.97	68.45
KRH18527	Soybean	cytosol	50.84	68.39
KRG92152	Soybean	cytosol	67.9	68.21
Bra028829.1-P	Field mustard	cytosol	33.79	68.11
Solyc11g006620.1.1	Tomato	cytosol	68.82	68.09
Bra022586.1-P	Field mustard	cytosol	65.75	67.72
CDY27076	Canola	cytosol	65.75	67.72
CDX91635	Canola	cytosol	65.75	67.72
AT5G03540.3	Thale cress	cytosol	68.2	66.87
PGSC0003DMT400072333	Potato	cytosol	64.98	66.09
Solyc10g081940.1.1	Tomato	cytosol	64.82	65.94
CDY10372	Canola	cytosol	30.26	65.67
TraesCS2A01G583800.2	Wheat	cytosol, mitochondrion, nucleus	62.83	64.21
GSMUA_Achr2P20450_001	Banana	plastid	64.06	62.43
KRG88728	Soybean	cytosol	62.06	61.96
KRG90170	Soybean	cytosol	35.33	61.66
CDY44373	Canola	cytosol	52.38	60.57
AT5G52350.1	Thale cress	cytosol	44.39	49.32
TraesCS2A01G583700.1	Wheat	cytosol, plastid	44.09	45.2
TraesCS3A01G429600.1	Wheat	cytosol	31.34	30.72
TraesCS3A01G302600.1	Wheat	peroxisome	27.65	30.05
TraesCS7A01G290900.2	Wheat	cytosol	29.49	29.91
TraesCS5A01G213100.1	Wheat	cytosol	27.34	29.77
TraesCS7A01G134400.1	Wheat	cytosol	30.26	29.23
TraesCS7A01G259600.1	Wheat	cytosol, nucleus, plastid	25.96	29.09
TraesCS2A01G281600.1	Wheat	cytosol	29.03	27.88
TraesCS3A01G348200.1	Wheat	cytosol	26.11	26.23
TraesCS1A01G297800.1	Wheat	cytosol	25.35	25.23
TraesCS5A01G122400.1	Wheat	mitochondrion	27.19	23.95
TraesCS4A01G208500.1	Wheat	cytosol	25.96	23.87

Protein Annotations

EnsemblPlants:TraesCS4A01G200100.3	EnsemblPlantsGene:TraesCS4A01G200100	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	InterPro:Cullin_repeat-like_dom_sf
InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF77	PFAM:PF03081	SEG:seg	SUPFAM:SSF74788
MapMan:22.6.3.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:488252084..488257189

Molecular Weight (calculated)

73756.4 Da

IEP (calculated)

8.516

GRAVY (calculated)

-0.416

Length

651 amino acids

Sequence
(BLAST)

001: MAVSALPRTM DALTRRATML RDSLHKSQGN TDGMVAILGS FDHRLSALEA AMRPTQVRTH AIRMAHENID KTLKAGEAIL SQFDLTRRAE ATILRGPHED
101: LESYLEAVDT LKGISRFFSS NKNFRSSEGI LNHVNGLLAK SSLKIEEEFK QLMTTYSKPI EPDRLFDCLP KSLRPSKDDE DENANQSDHP SKGLETAVYK
201: TPTLVPPRIL PLMNDIAQQL VQAGNQQSCY KIYRESRGAA LESSLRKLGV EKLTKDDVQK MQWEALEAKI GNWIQFMRIA VKLLLAGERK ICDQIFEGAN
301: FNRDQCFAEM ATNSVVTLLS FGDAVAKSKR SPEKLFVLLD MYEVMRELQS EIEVVFEGKA CSEMRETALG LTKRLAQTAQ ETFADFEEAV EKDASKTIVQ
401: DGTVHPLTSY VINYVKFLFD YQSTLKLLFQ EFETGSETES QLAVVTTRIM QALQNNLDGK SKQYKDPALT HLFLMNNVHY MVRSVRRSEA KDILGDDWIQ
501: RHRRIVQQNA NQYKRVAWAK VLQALSVQGA PGSTGSSTPA DLNSSGVSRA VIKERFCHGR FKAFNTQFEE LHAKQSLWIV PDQELRESLR LAIAEVLLPA
601: YRSFIKRFGN LVGSGKNPLK YIRYSPELVD KLLNEFFEGQ QYGEPKHQHR L

Best Arabidopsis Sequence Match ( AT5G52340.1 )
(BLAST)

001: MGVAQAMEAL TERASLMKES LHKSQTITDN MVGILGSFDH RLSALETAMR PTQIRTHSIR RAHENIDKAL KAAEVILDQF DISRKAEAKI LRGPHEDLES
101: YLEAIDQLRG TIKFFSNNKM FKSASGVISH AHGLLSKALS KLEDEFRQIL QNYSKPMEPD RLFECLPSNL RPSSEGEGGG GKTHDPHHKS LENAIFTVPT
201: VIPPRVLPLL HDLAQQMVQA GHQQQLFKSY RDTRAAVLEQ SLRKLGVERL SKDDVQRMQW EVLEAKIGNW IHYMRISVKL LFAAEKKICD QILDGVESLR
301: DQCFGEVTVN SVAVLLSFGE AIAKSKRSPE KLFVLLDMYE IMRELQPEIE LLFGSKPCAE MKESALNLTK RLAQTAQETF ADFEEAVEKD ATKTAVMDGT
401: VHPLTSYVIN YVKFLFDYQT TLRLLFQEFD SKDPDSELGA VTTRIMHALQ NNLDGKSKQY KDVALTQLFL MNNVHYIVRS VRRSEAKDLL GDDWVQIHRR
501: IVQQHANQYK RVSWAKILQC LTVQSSGSGP IENSNISRAS VKDRFKTFNS QFEELHQRQC QWTVPDSELR ESLRLAVAEV LLPAFRSFLK RFGPMIESGK
601: NPQKYIRFSP EDLERMLNEF FEGKTWSEPK R

Arabidopsis Description

ATEXO70A2Exocyst subunit exo70 family protein A2 [Source:UniProtKB/TrEMBL;Acc:F4KG57]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.