Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G424900.1 | Wheat | cytosol | 99.25 | 99.25 |
| TraesCS3B01G467500.1 | Wheat | cytosol | 98.04 | 97.6 |
| HORVU3Hr1G094570.3 | Barley | cytosol | 96.08 | 95.08 |
| EES01976 | Sorghum | cytosol | 78.01 | 78.72 |
| Zm00001d042331_P001 | Maize | cytosol, plastid | 64.16 | 74.74 |
| Zm00001d012020_P001 | Maize | cytosol | 74.4 | 73.51 |
| VIT_17s0000g01450.t01 | Wine grape | cytosol | 49.7 | 50.23 |
| GSMUA_Achr10P... | Banana | cytosol | 47.89 | 49.46 |
| TraesCS2A01G281600.1 | Wheat | cytosol | 49.55 | 48.53 |
| TraesCS7A01G134400.1 | Wheat | cytosol | 49.1 | 48.37 |
| TraesCS7A01G259600.1 | Wheat | cytosol, nucleus, plastid | 42.02 | 48.02 |
| Solyc03g111320.1.1 | Tomato | cytosol | 46.99 | 46.92 |
| KRH03960 | Soybean | nucleus | 46.84 | 46.7 |
| KRH57228 | Soybean | cytosol | 46.69 | 46.48 |
| PGSC0003DMT400090181 | Potato | cytosol | 46.69 | 46.48 |
| Bra014060.1-P | Field mustard | plastid | 46.23 | 45.82 |
| CDY05812 | Canola | cytosol, plastid | 46.08 | 45.67 |
| CDX71629 | Canola | cytosol | 45.93 | 45.66 |
| AT5G50380.1 | Thale cress | nucleus | 46.69 | 45.39 |
| TraesCS5A01G213100.1 | Wheat | cytosol | 32.98 | 36.62 |
| TraesCS7A01G290900.2 | Wheat | cytosol | 34.19 | 35.36 |
| TraesCS3A01G302600.1 | Wheat | peroxisome | 31.48 | 34.89 |
| TraesCS1A01G297800.1 | Wheat | cytosol | 30.87 | 31.35 |
| TraesCS4A01G200100.3 | Wheat | cytosol, mitochondrion | 30.72 | 31.34 |
| TraesCS3A01G348200.1 | Wheat | cytosol | 29.52 | 30.25 |
| TraesCS2A01G583800.2 | Wheat | cytosol, mitochondrion, nucleus | 28.92 | 30.14 |
| TraesCS2A01G583700.1 | Wheat | cytosol, plastid | 26.96 | 28.19 |
| TraesCS5A01G125500.1 | Wheat | cytosol, mitochondrion | 26.81 | 27.94 |
| TraesCS4A01G208500.1 | Wheat | cytosol | 27.86 | 26.13 |
| TraesCS5A01G122400.1 | Wheat | mitochondrion | 27.71 | 24.9 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G429600.1 | EnsemblPlantsGene:TraesCS3A01G429600 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 | InterPro:Cullin_repeat-like_dom_sf |
| InterPro:Exo70 | ncoils:Coil | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF19 | PFAM:PF03081 | SEG:seg |
| SUPFAM:SSF74788 | MapMan:22.6.3.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:672545024..672547018
Molecular Weight (calculated)
73216.7 Da
IEP (calculated)
4.466
GRAVY (calculated)
-0.248
Length
664 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAPPDGQE KVIAAAQQIV KSLANSKNAA DDMIRILSGF DNRFSLMSDL FPAAGAPDAA AGSEPLPEGD YAREGLPGPG GGDGFGDDDD LEDERDAAVE
101: DALRLVEQWD SPAAGDRLVF ESPEDAEEYL AAAACLMGEA GPRVEAALQV AMARLEEEFR QLLIRGTASL AAEDLHASLL RRLSLTVPTF HSASSVDLDC
201: PSFASHADEG DESASAARWS SASDGEISPY LISPDTVSTL KDIADVMLRA GYGPELCQVY SEVRRDTLME CLAVLGVDKM SLEEVQRVEW GVLDGKMKKW
301: IQALRVVVQG LLAEERRICG QILAADADAE EECFTEAAKG CVLQLLNFGD AIAIGKRSSE KLFRILGMYE ALAELLPELE ALFSGDARDF IKEEAEGILV
401: RLGDAVRGTV AEFANAIRGE TSRRSLPGGE IHPLTRYVMN YVRLLADYSR WLNHLLDGCE TELENGGDNA DMTPLGHCLL ILITHLLDKI EDKAKLYDDE
501: ALQNIFLMNN LWYVVQKIKD SELKSLLGDN WIRKRRGQIR RYSTGYLRSS WTRVLACLRD DGLPQTTGSS SALKAALKER FKSFNLAYEE LYRTQTAWKV
601: VDPQLREELK ISISEKVLPA YRSFVGRFRG QLEGGRNFAK YIKYNPEDVE NQVSDFFEGK KLNA
101: DALRLVEQWD SPAAGDRLVF ESPEDAEEYL AAAACLMGEA GPRVEAALQV AMARLEEEFR QLLIRGTASL AAEDLHASLL RRLSLTVPTF HSASSVDLDC
201: PSFASHADEG DESASAARWS SASDGEISPY LISPDTVSTL KDIADVMLRA GYGPELCQVY SEVRRDTLME CLAVLGVDKM SLEEVQRVEW GVLDGKMKKW
301: IQALRVVVQG LLAEERRICG QILAADADAE EECFTEAAKG CVLQLLNFGD AIAIGKRSSE KLFRILGMYE ALAELLPELE ALFSGDARDF IKEEAEGILV
401: RLGDAVRGTV AEFANAIRGE TSRRSLPGGE IHPLTRYVMN YVRLLADYSR WLNHLLDGCE TELENGGDNA DMTPLGHCLL ILITHLLDKI EDKAKLYDDE
501: ALQNIFLMNN LWYVVQKIKD SELKSLLGDN WIRKRRGQIR RYSTGYLRSS WTRVLACLRD DGLPQTTGSS SALKAALKER FKSFNLAYEE LYRTQTAWKV
601: VDPQLREELK ISISEKVLPA YRSFVGRFRG QLEGGRNFAK YIKYNPEDVE NQVSDFFEGK KLNA
001: MATPETRGVD SDLETAEKII LRWDSTTSEE AKENLIFQSG GDREEVDRYL KAVDEVQRHI SSISISDEVK ATIQIAMARL EDELRNILIS QTSTFEPDSL
101: LLDSSLSSSS FASSSRTELE DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD LRSIAQRMIG AGYSRECVQV
201: YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK
301: LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC
401: RGLKCTNDRN DPDMDISELE GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD KYLRKLTGIF RQAATKYQRA
501: TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN
601: LETAVLDFFE GYTTAPHLRR SQ
101: LLDSSLSSSS FASSSRTELE DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD LRSIAQRMIG AGYSRECVQV
201: YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK
301: LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC
401: RGLKCTNDRN DPDMDISELE GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD KYLRKLTGIF RQAATKYQRA
501: TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN
601: LETAVLDFFE GYTTAPHLRR SQ
Arabidopsis Description
ATEXO70D2At1g54090 [Source:UniProtKB/TrEMBL;Acc:Q9SYG5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.