Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G109600.1 | Wheat | cytosol | 98.02 | 97.75 |
| TraesCS4B01G112100.1 | Wheat | cytosol | 96.05 | 95.77 |
| HORVU4Hr1G020050.1 | Barley | cytosol, plastid | 93.64 | 93.64 |
| Os11t0167600-00 | Rice | plasma membrane | 73.31 | 75.0 |
| Zm00001d004846_P001 | Maize | cytosol, plastid | 70.76 | 73.25 |
| EES08037 | Sorghum | cytosol, plastid | 71.05 | 73.22 |
| Zm00001d053192_P001 | Maize | cytosol, plastid | 69.63 | 72.18 |
| CDX97230 | Canola | cytosol | 16.1 | 60.32 |
| CDX69666 | Canola | cytosol | 15.96 | 59.79 |
| TraesCS5A01G122400.1 | Wheat | mitochondrion | 61.3 | 58.73 |
| GSMUA_Achr6P07200_001 | Banana | nucleus | 48.31 | 51.74 |
| Bra023443.1-P | Field mustard | cytosol | 31.5 | 51.15 |
| GSMUA_Achr6P18090_001 | Banana | nucleus | 29.8 | 45.77 |
| VIT_01s0146g00160.t01 | Wine grape | nucleus | 42.09 | 45.57 |
| GSMUA_Achr6P25750_001 | Banana | endoplasmic reticulum | 44.63 | 45.08 |
| PGSC0003DMT400006075 | Potato | cytosol | 35.31 | 42.23 |
| Solyc05g024340.1.1 | Tomato | cytosol | 35.03 | 41.89 |
| PGSC0003DMT400052043 | Potato | nucleus | 40.82 | 41.4 |
| CDY69943 | Canola | cytosol | 35.73 | 40.35 |
| CDX78509 | Canola | nucleus | 35.59 | 40.19 |
| Bra006183.1-P | Field mustard | nucleus | 35.59 | 40.19 |
| PGSC0003DMT400013431 | Potato | nucleus | 37.43 | 39.91 |
| KRH70050 | Soybean | nucleus | 39.83 | 39.77 |
| Solyc01g009880.2.1 | Tomato | nucleus | 37.29 | 39.76 |
| CDX69615 | Canola | cytosol, nucleus, plastid | 38.28 | 39.56 |
| CDY09840 | Canola | cytosol, nucleus, plastid | 38.28 | 39.5 |
| Bra008852.1-P | Field mustard | nucleus | 35.73 | 39.41 |
| Bra008789.1-P | Field mustard | cytosol, nucleus, plastid | 37.99 | 39.39 |
| CDX78551 | Canola | nucleus | 37.71 | 39.21 |
| Solyc02g094370.1.1 | Tomato | cytosol | 39.41 | 39.08 |
| CDX70532 | Canola | nucleus | 37.57 | 39.0 |
| AT5G13150.1 | Thale cress | nucleus | 35.88 | 38.9 |
| KRH06895 | Soybean | cytosol | 39.12 | 38.85 |
| AT5G13990.1 | Thale cress | nucleus | 38.14 | 38.85 |
| KRG94595 | Soybean | nucleus | 38.98 | 38.82 |
| Bra006228.1-P | Field mustard | nucleus | 37.29 | 38.77 |
| CDX85618 | Canola | nucleus | 37.85 | 38.4 |
| KRH36360 | Soybean | cytosol | 31.92 | 37.36 |
| CDX91088 | Canola | cytosol, nucleus, vacuole | 37.01 | 33.94 |
| KRG93132 | Soybean | cytosol | 21.05 | 31.7 |
| TraesCS7A01G290900.2 | Wheat | cytosol | 27.26 | 30.06 |
| TraesCS7A01G259600.1 | Wheat | cytosol, nucleus, plastid | 24.58 | 29.95 |
| TraesCS5A01G213100.1 | Wheat | cytosol | 24.72 | 29.26 |
| TraesCS3A01G429600.1 | Wheat | cytosol | 26.13 | 27.86 |
| TraesCS1A01G297800.1 | Wheat | cytosol | 25.71 | 27.83 |
| TraesCS7A01G134400.1 | Wheat | cytosol | 26.41 | 27.74 |
| TraesCS3A01G348200.1 | Wheat | cytosol | 25.28 | 27.62 |
| TraesCS2A01G281600.1 | Wheat | cytosol | 26.27 | 27.43 |
| TraesCS2A01G583800.2 | Wheat | cytosol, mitochondrion, nucleus | 24.15 | 26.84 |
| TraesCS3A01G302600.1 | Wheat | peroxisome | 22.6 | 26.71 |
| GSMUA_Achr10P... | Banana | cytosol | 29.1 | 26.48 |
| TraesCS4A01G200100.3 | Wheat | cytosol, mitochondrion | 23.87 | 25.96 |
| TraesCS5A01G125500.1 | Wheat | cytosol, mitochondrion | 22.18 | 24.65 |
| TraesCS2A01G583700.1 | Wheat | cytosol, plastid | 19.92 | 22.2 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G208500.1 | EnsemblPlantsGene:TraesCS4A01G208500 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 | InterPro:Cullin_repeat-like_dom_sf |
| InterPro:Exo70 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF81 | PFAM:PF03081 | SEG:seg | SUPFAM:SSF74788 |
| MapMan:22.6.3.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:501638027..501640621
Molecular Weight (calculated)
76872.1 Da
IEP (calculated)
5.133
GRAVY (calculated)
-0.323
Length
708 amino acids
Sequence
(BLAST)
(BLAST)
001: MERIPIPIAM LPQKSSSFSQ ATIREEKLGR NLSLGAIKLN EHIERVKKDA AEAAGDKKAA AGGGEGGAAD GTGVGETPEP PPHEEPDLAE LSAEVEAFLA
101: SRDGDAPLSI SEVTLDRFAS AVEVEIAQSE GEEGKWALGE GGQQPLLLAA IKRIVTLASA LTATGGGNGT EGAVKYTIGV HRVTGVLHRS MTFLEDELYA
201: LLEDPRLTKT PNASESGSAT AKSMKRPPSF GQGGDPDRSV VPPTEGGSAG DDASQPFPAE TVDHLRAMAE IMITAGYETE CTQVFLVARR NALDATMQSL
301: GYEKASIDDV VRMAWEGLES EIGTWIKAYR HILNAGLSAE HDLCVRVFVG RNAGLGRDIF ADLARCAMLQ MFNFTEAVAM TKRAAEKLFK VLDMYEAIRD
401: GAPVVDGFIS TNKAEGGENS SGAEALADLK SELASVRSRL GESAAAIFCD LESSIRADAG KQPVPGGAVH PLTRYLMNYL KYACEYKNTL EQVFREFHRP
501: DADDAPGHEG ESNPFAAQLM EVMELLHGSL EAKSKLYKDL ALSSIFLMNN GRYMLQKIRG SPEINAVVGE AWARKRSTDL RQYHKNYQRE TWGRVLNVLR
601: DDGGITVKGH VQKPVLKERF KQFNAAMDEI QRTQGAWVVS DEQLQSELRV SIAAVVVPAY RSFLGRFAQH FTAGRQTEKY IKLSADDLEG IIEELFEGSA
701: GSMSRRRN
101: SRDGDAPLSI SEVTLDRFAS AVEVEIAQSE GEEGKWALGE GGQQPLLLAA IKRIVTLASA LTATGGGNGT EGAVKYTIGV HRVTGVLHRS MTFLEDELYA
201: LLEDPRLTKT PNASESGSAT AKSMKRPPSF GQGGDPDRSV VPPTEGGSAG DDASQPFPAE TVDHLRAMAE IMITAGYETE CTQVFLVARR NALDATMQSL
301: GYEKASIDDV VRMAWEGLES EIGTWIKAYR HILNAGLSAE HDLCVRVFVG RNAGLGRDIF ADLARCAMLQ MFNFTEAVAM TKRAAEKLFK VLDMYEAIRD
401: GAPVVDGFIS TNKAEGGENS SGAEALADLK SELASVRSRL GESAAAIFCD LESSIRADAG KQPVPGGAVH PLTRYLMNYL KYACEYKNTL EQVFREFHRP
501: DADDAPGHEG ESNPFAAQLM EVMELLHGSL EAKSKLYKDL ALSSIFLMNN GRYMLQKIRG SPEINAVVGE AWARKRSTDL RQYHKNYQRE TWGRVLNVLR
601: DDGGITVKGH VQKPVLKERF KQFNAAMDEI QRTQGAWVVS DEQLQSELRV SIAAVVVPAY RSFLGRFAQH FTAGRQTEKY IKLSADDLEG IIEELFEGSA
701: GSMSRRRN
001: MEKNDKDPDH DDKSKGDEKG DVVSDAHPSD DAHHQDGISN ENVDVVGNAE TDHQDPGDNN VDKVSQGEEA PEIRQTLESL SEELDQFLPT LSLHMEEHKD
101: STEEKGEDGY FQIPQFVGKF LDLFEEKLSK YDSGEPKTVW YQDPEEVSSL LEAVDRVSKL MGLLLNTKSC LDHHESLINH AGSIQQRAMA FLEDEFRIIL
201: EESVTKESVV VTDDSNSQRR STADQQDHQN DVVVSQDHDQ MLVPECGDQE IEYPGYPEDV VVVLRKIAEK MKAGGYGWEC REVYLVGRRN ILMRTLKQDC
301: EFEKVSIDEV QKMSWDTLER EIPIWNKTFK DCSSLFFPGE LKLAERIFPG DEGNLFCIVT HGLAIQFLGF AEAVAMTRRS TEKLFKILDI YETLRDSFPA
401: MEELFPEELR SELRNEVTSA RSRLGETAIH IFCDLEHSIK SDSSKTPVPG GAVHPLTRYT MNYLKYSCEY KDTLEQVFKS HSKMEREEEE PVESGNSAFA
501: SQLMRIMELL DGNLETKSKQ YKDIPLSCIF MMNNGRYIVQ KIKGSAEIHE VMGDTWCRRR SSELRNYHKN YQRETWGKLL GFLGHEGLMH NGKIVKPNLK
601: ERFKSFNATF DEIHKTQTTW VVNDEQLQSE LRVSITAVMI PAYRAFMARF GQYLDPGRQT EKYVKYQPED IEDLIDQLFE GNTSSSSTAT ARRRT
101: STEEKGEDGY FQIPQFVGKF LDLFEEKLSK YDSGEPKTVW YQDPEEVSSL LEAVDRVSKL MGLLLNTKSC LDHHESLINH AGSIQQRAMA FLEDEFRIIL
201: EESVTKESVV VTDDSNSQRR STADQQDHQN DVVVSQDHDQ MLVPECGDQE IEYPGYPEDV VVVLRKIAEK MKAGGYGWEC REVYLVGRRN ILMRTLKQDC
301: EFEKVSIDEV QKMSWDTLER EIPIWNKTFK DCSSLFFPGE LKLAERIFPG DEGNLFCIVT HGLAIQFLGF AEAVAMTRRS TEKLFKILDI YETLRDSFPA
401: MEELFPEELR SELRNEVTSA RSRLGETAIH IFCDLEHSIK SDSSKTPVPG GAVHPLTRYT MNYLKYSCEY KDTLEQVFKS HSKMEREEEE PVESGNSAFA
501: SQLMRIMELL DGNLETKSKQ YKDIPLSCIF MMNNGRYIVQ KIKGSAEIHE VMGDTWCRRR SSELRNYHKN YQRETWGKLL GFLGHEGLMH NGKIVKPNLK
601: ERFKSFNATF DEIHKTQTTW VVNDEQLQSE LRVSITAVMI PAYRAFMARF GQYLDPGRQT EKYVKYQPED IEDLIDQLFE GNTSSSSTAT ARRRT
Arabidopsis Description
ATEXO70C2EXO70C2 [Source:UniProtKB/TrEMBL;Acc:A0A178UPG0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.