Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023443.1-P | Field mustard | cytosol | 56.55 | 90.14 |
| CDX69615 | Canola | cytosol, nucleus, plastid | 85.32 | 86.57 |
| Bra008789.1-P | Field mustard | cytosol, nucleus, plastid | 84.89 | 86.38 |
| CDY09840 | Canola | cytosol, nucleus, plastid | 85.04 | 86.15 |
| CDX85618 | Canola | nucleus | 85.04 | 84.67 |
| CDX78551 | Canola | nucleus | 82.59 | 84.29 |
| Bra006228.1-P | Field mustard | nucleus | 82.45 | 84.14 |
| CDX70532 | Canola | nucleus | 82.16 | 83.72 |
| CDX91088 | Canola | cytosol, nucleus, vacuole | 81.73 | 73.58 |
| KRH70050 | Soybean | nucleus | 48.92 | 47.95 |
| Os12t0165600-01 | Rice | cytosol, plasma membrane | 33.53 | 47.65 |
| KRH06895 | Soybean | cytosol | 46.76 | 45.58 |
| KRG94595 | Soybean | nucleus | 45.9 | 44.87 |
| PGSC0003DMT400052043 | Potato | nucleus | 44.75 | 44.56 |
| AT5G13150.1 | Thale cress | nucleus | 41.44 | 44.1 |
| GSMUA_Achr6P07200_001 | Banana | nucleus | 41.58 | 43.72 |
| Solyc02g094370.1.1 | Tomato | cytosol | 44.46 | 43.28 |
| TraesCS5B01G122500.1 | Wheat | plastid | 39.28 | 41.24 |
| GSMUA_Achr6P25750_001 | Banana | endoplasmic reticulum | 41.58 | 41.23 |
| Zm00001d023513_P001 | Maize | plastid | 39.14 | 39.82 |
| TraesCS4B01G112100.1 | Wheat | cytosol | 40.43 | 39.58 |
| Zm00001d004846_P001 | Maize | cytosol, plastid | 38.42 | 39.04 |
| Zm00001d041908_P001 | Maize | plastid | 37.84 | 38.85 |
| EES16704 | Sorghum | plastid | 38.99 | 38.83 |
| Zm00001d053192_P001 | Maize | cytosol, plastid | 38.13 | 38.8 |
| Os11t0167600-00 | Rice | plasma membrane | 38.56 | 38.73 |
| EES08037 | Sorghum | cytosol, plastid | 38.13 | 38.57 |
| TraesCS4D01G109600.1 | Wheat | cytosol | 39.14 | 38.31 |
| TraesCS4A01G208500.1 | Wheat | cytosol | 38.85 | 38.14 |
| HORVU4Hr1G020050.1 | Barley | cytosol, plastid | 38.7 | 37.99 |
| TraesCS5D01G130800.1 | Wheat | plastid | 38.85 | 37.5 |
| GSMUA_Achr6P18090_001 | Banana | nucleus | 24.46 | 36.88 |
| TraesCS5A01G122400.1 | Wheat | mitochondrion | 39.14 | 36.81 |
| AT5G58430.1 | Thale cress | cytosol | 29.21 | 32.53 |
| AT1G54090.1 | Thale cress | nucleus | 28.2 | 31.51 |
| HORVU5Hr1G039240.1 | Barley | plastid | 32.52 | 31.04 |
| AT3G14090.1 | Thale cress | cytoskeleton, cytosol, nucleus | 27.63 | 30.82 |
| AT1G72470.1 | Thale cress | nucleus | 28.06 | 30.81 |
| AT1G07000.1 | Thale cress | cytosol | 25.9 | 30.05 |
| AT5G03540.3 | Thale cress | cytosol | 27.91 | 29.22 |
| AT5G52340.1 | Thale cress | cytosol | 25.9 | 28.53 |
| AT5G50380.1 | Thale cress | nucleus | 27.63 | 28.11 |
| AT3G29400.1 | Thale cress | cytosol | 25.76 | 27.2 |
| AT5G52350.1 | Thale cress | cytosol | 20.43 | 24.23 |
| AT5G61010.1 | Thale cress | cytosol | 22.16 | 24.1 |
| AT2G28650.1 | Thale cress | plastid | 19.71 | 23.91 |
| AT2G28640.1 | Thale cress | mitochondrion | 19.71 | 22.64 |
| AT5G59730.1 | Thale cress | cytosol, plastid | 20.58 | 22.56 |
| GSMUA_Achr10P... | Banana | cytosol | 25.18 | 22.49 |
| AT2G39380.1 | Thale cress | plastid | 20.58 | 22.45 |
| AT3G09520.1 | Thale cress | cytosol | 20.0 | 22.13 |
| AT3G09530.1 | Thale cress | mitochondrion | 20.14 | 21.98 |
| AT1G07725.1 | Thale cress | cytosol, nucleus, plastid | 19.14 | 21.63 |
| AT3G55150.1 | Thale cress | plastid | 19.71 | 21.54 |
Protein Annotations
| Gene3D:1.20.1280.170 | MapMan:22.6.3.1 | EntrezGene:831247 | UniProt:A0A178UPG0 | ProteinID:AED91971.1 | ArrayExpress:AT5G13990 |
| EnsemblPlantsGene:AT5G13990 | RefSeq:AT5G13990 | TAIR:AT5G13990 | RefSeq:AT5G13990-TAIR-G | EnsemblPlants:AT5G13990.1 | TAIR:AT5G13990.1 |
| Symbol:ATEXO70C2 | Unigene:At.31992 | ProteinID:BAB11127.1 | EMBL:BT003863 | EMBL:BT006148 | InterPro:Cullin_repeat-like_dom_sf |
| InterPro:Exo70 | GO:GO:0000003 | GO:GO:0000145 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009856 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0030154 | GO:GO:0040007 | GO:GO:0080092 | GO:GO:0090406 |
| RefSeq:NP_196903.1 | ProteinID:OAO95688.1 | PFAM:PF03081 | PO:PO:0000084 | PO:PO:0000256 | PO:PO:0000258 |
| PO:PO:0000262 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0005059 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF82 | UniProt:Q9FFX6 | SUPFAM:SSF74788 |
| UniParc:UPI000000C1AC | SEG:seg | : | : | : | : |
Description
ATEXO70C2EXO70C2 [Source:UniProtKB/TrEMBL;Acc:A0A178UPG0]
Coordinates
chr5:-:4514568..4516892
Molecular Weight (calculated)
79770.5 Da
IEP (calculated)
4.661
GRAVY (calculated)
-0.689
Length
695 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKNDKDPDH DDKSKGDEKG DVVSDAHPSD DAHHQDGISN ENVDVVGNAE TDHQDPGDNN VDKVSQGEEA PEIRQTLESL SEELDQFLPT LSLHMEEHKD
101: STEEKGEDGY FQIPQFVGKF LDLFEEKLSK YDSGEPKTVW YQDPEEVSSL LEAVDRVSKL MGLLLNTKSC LDHHESLINH AGSIQQRAMA FLEDEFRIIL
201: EESVTKESVV VTDDSNSQRR STADQQDHQN DVVVSQDHDQ MLVPECGDQE IEYPGYPEDV VVVLRKIAEK MKAGGYGWEC REVYLVGRRN ILMRTLKQDC
301: EFEKVSIDEV QKMSWDTLER EIPIWNKTFK DCSSLFFPGE LKLAERIFPG DEGNLFCIVT HGLAIQFLGF AEAVAMTRRS TEKLFKILDI YETLRDSFPA
401: MEELFPEELR SELRNEVTSA RSRLGETAIH IFCDLEHSIK SDSSKTPVPG GAVHPLTRYT MNYLKYSCEY KDTLEQVFKS HSKMEREEEE PVESGNSAFA
501: SQLMRIMELL DGNLETKSKQ YKDIPLSCIF MMNNGRYIVQ KIKGSAEIHE VMGDTWCRRR SSELRNYHKN YQRETWGKLL GFLGHEGLMH NGKIVKPNLK
601: ERFKSFNATF DEIHKTQTTW VVNDEQLQSE LRVSITAVMI PAYRAFMARF GQYLDPGRQT EKYVKYQPED IEDLIDQLFE GNTSSSSTAT ARRRT
101: STEEKGEDGY FQIPQFVGKF LDLFEEKLSK YDSGEPKTVW YQDPEEVSSL LEAVDRVSKL MGLLLNTKSC LDHHESLINH AGSIQQRAMA FLEDEFRIIL
201: EESVTKESVV VTDDSNSQRR STADQQDHQN DVVVSQDHDQ MLVPECGDQE IEYPGYPEDV VVVLRKIAEK MKAGGYGWEC REVYLVGRRN ILMRTLKQDC
301: EFEKVSIDEV QKMSWDTLER EIPIWNKTFK DCSSLFFPGE LKLAERIFPG DEGNLFCIVT HGLAIQFLGF AEAVAMTRRS TEKLFKILDI YETLRDSFPA
401: MEELFPEELR SELRNEVTSA RSRLGETAIH IFCDLEHSIK SDSSKTPVPG GAVHPLTRYT MNYLKYSCEY KDTLEQVFKS HSKMEREEEE PVESGNSAFA
501: SQLMRIMELL DGNLETKSKQ YKDIPLSCIF MMNNGRYIVQ KIKGSAEIHE VMGDTWCRRR SSELRNYHKN YQRETWGKLL GFLGHEGLMH NGKIVKPNLK
601: ERFKSFNATF DEIHKTQTTW VVNDEQLQSE LRVSITAVMI PAYRAFMARF GQYLDPGRQT EKYVKYQPED IEDLIDQLFE GNTSSSSTAT ARRRT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.