Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93621 | Canola | cytosol | 57.24 | 78.4 |
| Bra018685.1-P | Field mustard | cytosol, nucleus, plastid | 72.36 | 76.99 |
| CDX95128 | Canola | cytosol, nucleus, plastid | 72.52 | 76.76 |
| AT2G28640.1 | Thale cress | mitochondrion | 56.91 | 57.85 |
| AT2G28650.1 | Thale cress | plastid | 50.89 | 54.62 |
| KRH22988 | Soybean | plastid | 34.47 | 44.07 |
| VIT_06s0004g04010.t01 | Wine grape | plastid | 43.58 | 43.51 |
| AT5G59730.1 | Thale cress | cytosol, plastid | 44.23 | 42.9 |
| KRH29876 | Soybean | mitochondrion | 42.11 | 42.53 |
| KRH10327 | Soybean | plastid | 40.65 | 42.16 |
| KRH25009 | Soybean | mitochondrion | 41.79 | 41.86 |
| KRH22987 | Soybean | cytosol, mitochondrion, plastid | 38.86 | 41.71 |
| PGSC0003DMT400078145 | Potato | mitochondrion | 40.81 | 40.22 |
| Solyc06g075610.1.1 | Tomato | plastid | 40.49 | 39.97 |
| Solyc11g073010.1.1 | Tomato | plastid | 40.98 | 39.75 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.75 | 39.51 |
| PGSC0003DMT400028204 | Potato | plastid | 38.21 | 39.36 |
| Solyc06g005280.1.1 | Tomato | plastid | 37.72 | 38.8 |
| GSMUA_Achr10P... | Banana | cytosol | 28.29 | 38.58 |
| PGSC0003DMT400040200 | Potato | plastid | 37.72 | 38.47 |
| AT3G55150.1 | Thale cress | plastid | 39.02 | 37.74 |
| AT3G09520.1 | Thale cress | cytosol | 38.37 | 37.58 |
| GSMUA_Achr10P... | Banana | mitochondrion | 36.42 | 36.42 |
| AT2G39380.1 | Thale cress | plastid | 37.07 | 35.79 |
| GSMUA_Achr7P15340_001 | Banana | mitochondrion | 35.28 | 35.57 |
| GSMUA_Achr6P34400_001 | Banana | mitochondrion | 34.31 | 34.93 |
| AT3G09530.1 | Thale cress | mitochondrion | 35.77 | 34.54 |
| AT1G54090.1 | Thale cress | nucleus | 26.83 | 26.53 |
| AT3G14090.1 | Thale cress | cytoskeleton, cytosol, nucleus | 26.34 | 26.0 |
| AT5G50380.1 | Thale cress | nucleus | 28.46 | 25.62 |
| AT1G72470.1 | Thale cress | nucleus | 26.18 | 25.43 |
| AT3G29400.1 | Thale cress | cytosol | 25.69 | 24.01 |
| AT5G03540.3 | Thale cress | cytosol | 25.69 | 23.8 |
| AT5G58430.1 | Thale cress | cytosol | 24.07 | 23.72 |
| AT5G52340.1 | Thale cress | cytosol | 23.74 | 23.14 |
| AT1G07000.1 | Thale cress | cytosol | 22.28 | 22.87 |
| AT5G61010.1 | Thale cress | cytosol | 22.44 | 21.6 |
| AT5G52350.1 | Thale cress | cytosol | 20.16 | 21.16 |
| AT5G13150.1 | Thale cress | nucleus | 22.28 | 20.98 |
| AT5G13990.1 | Thale cress | nucleus | 21.63 | 19.14 |
Protein Annotations
| MapMan:22.6.3.1 | EntrezGene:837287 | ProteinID:AAF75081.1 | ProteinID:AEE28170.1 | ArrayExpress:AT1G07725 | EnsemblPlantsGene:AT1G07725 |
| RefSeq:AT1G07725 | TAIR:AT1G07725 | RefSeq:AT1G07725-TAIR-G | EnsemblPlants:AT1G07725.1 | TAIR:AT1G07725.1 | Symbol:ATEXO70H6 |
| Unigene:At.45859 | InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0090406 | RefSeq:NP_683286.2 | PFAM:PF03081 | PO:PO:0009030 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF17 |
| UniProt:Q9LQP9 | SUPFAM:SSF74788 | UniParc:UPI00000A7AE3 | SEG:seg | : | : |
Description
ATEXO70H6Exocyst subunit exo70 family protein H6 [Source:UniProtKB/TrEMBL;Acc:Q9LQP9]
Coordinates
chr1:-:2394801..2397272
Molecular Weight (calculated)
68405.7 Da
IEP (calculated)
7.769
GRAVY (calculated)
-0.226
Length
615 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLLKPTTLS KSSKVGPQQQ QGFSESLIGD SVEAADAFIC QWVTPHLCDS SSSSCSLSSL FSAQNRLEGR RFLEVLGKLQ YAIQSTVAMN PDSAKLAKGQ
101: DLMRKAMKHL EKEFYRVLKS NRRFLSPESV SGWSSESNIP SRSSGTASDS SSDGELYSES SSELGKDIGG GGNSDAIVDL KMIANCMISS GYEKDCVKIY
201: KKFRKKIIVD TLSHLGFEKL TSTQMQKLEW EILEKKIKIW VIVARVAITT LFNGERILSD HIFSSSVAES CFVDITLQSA LNLFIFSLTV AKSRKTAEKI
301: FPTLDVYQTI LQLTPKIDQI FSYDSTAAVR LQANESLEKL SESVNAMMTE FQSSITKESS KSAISGGGVH QLTRYVMNFI VFLADYSDSL ATILKESSLP
401: LPEDYFSSSG EENPGSGDRS PMAARLAWLI LVLLCKIDAK SRLYNDSALS YLFLANNLHY VVTKVRTSNL RLVLGDDWVA NHEVKVNQYL EKYEKMAWGD
501: VIASLPGDST AGTEAEESLR RFNEAFEEAY KKHKTWVVPD PNLRDEIQAS IARKLMPGYT GFYKKHPVGS CNIVRFTPED LNNYITDLYV GLGRSVPVSK
601: TKKYMVSPSH TTDLK
101: DLMRKAMKHL EKEFYRVLKS NRRFLSPESV SGWSSESNIP SRSSGTASDS SSDGELYSES SSELGKDIGG GGNSDAIVDL KMIANCMISS GYEKDCVKIY
201: KKFRKKIIVD TLSHLGFEKL TSTQMQKLEW EILEKKIKIW VIVARVAITT LFNGERILSD HIFSSSVAES CFVDITLQSA LNLFIFSLTV AKSRKTAEKI
301: FPTLDVYQTI LQLTPKIDQI FSYDSTAAVR LQANESLEKL SESVNAMMTE FQSSITKESS KSAISGGGVH QLTRYVMNFI VFLADYSDSL ATILKESSLP
401: LPEDYFSSSG EENPGSGDRS PMAARLAWLI LVLLCKIDAK SRLYNDSALS YLFLANNLHY VVTKVRTSNL RLVLGDDWVA NHEVKVNQYL EKYEKMAWGD
501: VIASLPGDST AGTEAEESLR RFNEAFEEAY KKHKTWVVPD PNLRDEIQAS IARKLMPGYT GFYKKHPVGS CNIVRFTPED LNNYITDLYV GLGRSVPVSK
601: TKKYMVSPSH TTDLK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.