CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 5
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29876	Soybean	mitochondrion	92.51	93.27
KRH10327	Soybean	plastid	63.03	65.26
KRH22988	Soybean	plastid	50.98	65.07
KRH22987	Soybean	cytosol, mitochondrion, plastid	60.42	64.75
VIT_06s0004g04010.t01	Wine grape	plastid	58.47	58.28
Solyc11g073010.1.1	Tomato	plastid	52.93	51.26
PGSC0003DMT400028204	Potato	plastid	48.53	49.92
PGSC0003DMT400040200	Potato	plastid	48.86	49.75
PGSC0003DMT400078145	Potato	mitochondrion	50.33	49.52
CDX88720	Canola	plastid	44.3	49.45
CDY49576	Canola	cytosol	44.14	49.18
Solyc06g005280.1.1	Tomato	plastid	47.72	49.0
Solyc06g075610.1.1	Tomato	plastid	49.67	48.96
CDX93621	Canola	cytosol	35.67	48.78
CDY68540	Canola	plastid	43.49	48.72
CDX71078	Canola	cytosol, mitochondrion, nucleus, plastid	43.97	48.65
CDY60562	Canola	cytosol	43.65	48.46
KRH67580	Soybean	plastid	49.84	48.19
KRG95862	Soybean	plastid	48.37	48.06
KRH32349	Soybean	plastid	48.05	47.43
Bra006696.1-P	Field mustard	cytosol	47.56	47.1
AT2G28650.1	Thale cress	plastid	43.81	46.95
GSMUA_AchrUn_...	Banana	cytosol	43.49	46.68
Bra020294.1-P	Field mustard	cytosol, plastid	46.91	46.38
Bra002537.1-P	Field mustard	cytosol, nucleus, plastid	47.39	46.34
AT5G59730.1	Thale cress	cytosol, plastid	47.72	46.21
GSMUA_Achr10P...	Banana	cytosol	33.88	46.12
CDX80235	Canola	cytosol, nucleus, plastid	46.91	46.01
CDY04577	Canola	plastid	40.07	45.3
KRH19755	Soybean	mitochondrion, plastid	38.76	45.16
CDY60967	Canola	plastid	27.85	44.65
CDX95128	Canola	cytosol, nucleus, plastid	41.53	43.89
Bra018685.1-P	Field mustard	cytosol, nucleus, plastid	41.21	43.77
GSMUA_Achr6P34400_001	Banana	mitochondrion	42.51	43.21
CDY31722	Canola	mitochondrion, plastid	40.39	42.61
CDX77195	Canola	mitochondrion, plastid	40.39	42.47
AT2G28640.1	Thale cress	mitochondrion	41.69	42.31
GSMUA_Achr10P...	Banana	mitochondrion	42.35	42.28
Bra035682.1-P	Field mustard	mitochondrion, plastid	41.21	42.17
GSMUA_Achr7P15340_001	Banana	mitochondrion	41.86	42.13
AT1G07725.1	Thale cress	cytosol, nucleus, plastid	41.86	41.79
CDY60968	Canola	cytosol	6.51	38.1
KRH47637	Soybean	endoplasmic reticulum	31.43	30.83
KRG90170	Soybean	cytosol	18.57	30.56
KRH06215	Soybean	cytosol	31.76	29.24
KRH03960	Soybean	nucleus	30.29	27.93
KRH57228	Soybean	cytosol	30.13	27.74
KRH17115	Soybean	cytosol	27.85	26.55
KRH18527	Soybean	cytosol	20.85	26.45
KRH72760	Soybean	cytosol	27.52	26.41
KRH01279	Soybean	cytosol	28.5	25.74
KRH45035	Soybean	cytosol	28.34	25.55
KRH63230	Soybean	cytosol	26.06	25.4
KRH34637	Soybean	cytosol	26.22	25.12
KRG92152	Soybean	cytosol	26.38	25.0
KRH54704	Soybean	cytosol	25.41	24.72
KRG88728	Soybean	cytosol	25.73	24.23
KRG93132	Soybean	cytosol	16.45	21.49
KRH36360	Soybean	cytosol	21.01	21.32
KRG94595	Soybean	nucleus	23.94	20.68
KRH06895	Soybean	cytosol	23.78	20.48
KRH70050	Soybean	nucleus	23.45	20.31

Protein Annotations

EntrezGene:100810579	MapMan:22.6.3.1	EMBL:ACUP02007196	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	EnsemblPlantsGene:GLYMA_12G075200
GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810
GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	UniProt:I1LR33	EnsemblPlants:KRH25009	ProteinID:KRH25009
ProteinID:KRH25009.1	PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF17	SUPFAM:SSF74788	UniParc:UPI000233D733
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:5723240..5725084

Molecular Weight (calculated)

69082.5 Da

IEP (calculated)

6.527

GRAVY (calculated)

-0.276

Length

614 amino acids

Sequence
(BLAST)

001: MPRKGMRSIF FKPSTSTSSL PPPPSPQRTF SDSLMDENIE TAEKLITKWD DSKVPTTTAL FSGTRQEAKQ YLNAVKGLQS AMQYLVAQDS TSSTLVRAQL
101: LMQLAMKTLQ KEFYQILSSN REHLDPETVT TRSSVDLRSV SDYVSDYDDE ISITEDEFRV SETERVSMLA MEDLKAIAES MISSGYGKEC VKVYIIMRKS
201: IVDEALYHLG VEKLSLSQVQ KLDWEVLELK IKSWLQVVKV AVGTLFHGER ILCDHVFASD SGKRIAESCF AEITKDGAVS LFGFPEMVAK CKKTPEKMFR
301: ILDLYEAISD YLPQIESIFS FESTSNIRSQ AVTSMVKLGD AVRTMLTDLE TAIQKESSKK PVPGGGVHPL TRYVMNYLTF LADYSGVLVD IIADLPQSPL
401: PESYYRSPMR EENPPASELS ERIAWIILVV LCKLDGKAEL YKDVAHSYLF LANNMQYVVV KVRKSNLGFL LGEEWLDKHK LKVREYASKY ERVGWSAVFS
501: ALPENPAAEL TAEQARACFV RFDAAFHEAC RKQASWFVSD PKFRDEIKGS IASKLVQKYS EFYEKNRVGS ESVRGFLPDD IGKYLSNILC NGDSGSVSSH
601: SSSTTSSSHR SNRR

Best Arabidopsis Sequence Match ( AT5G59730.2 )
(BLAST)

001: MGKHLFRSSP PPEKPTAHLS LAESAVQECM SNINTVISKW TSPAASSSDD FLFSTNSRRE AEEFVTAVRH LQSTMHRLVS VNPSSEKLIY AQNLMQSAMK
101: LLESEFHRVL KANREYLDPE CVSVRSYRSS RFSTSTTTSV SDSEDESSYE ENADEEHRFS GGDSDAMDDL KMIADCMIST GYAKECVRVY KTVRKSIVDE
201: TLHNLQMERF NLHQVQKMDW EILESKIKTW LKAVKLAVRK LFFGERILAD HVFSSSGLIV ESSFTEITQE GALILFTFPE YASKIKKLTP EKMFRFLDMY
301: EALANLYVEI ESIFYFESAA AVRSQVINSL ARLGDATRLM MTDFESAIQK ETSKTPIIGG GVHPLTRYVM NYLSFLADYS DSIAAIFENW KLSVPTPLPD
401: SLYISGGDEA NPEDLYSSPV SVRIAWVILL TLCKIDGKAQ PYKDVALSYL FLANNLQYVV VKVRSSTLKV LLGDDWVFRH EEKVKLYADK FEKLAWGKVL
501: DLLPEIPTDE ISPEEAKVLV ARFNDEFETS YRKQTSWVIP DPKLRDQIKI TLSQKLMLVC TEFYRMNRFA YGMVGDNEAI SRYTPEDIGN YLSDLYFGSR
601: GSGSVSTAGG SGSGSGSGTV RVKLVADVVV IE

Arabidopsis Description

ATEXO70H7AT5g59730/mth12_130 [Source:UniProtKB/TrEMBL;Acc:Q9FN91]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.