CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22988	Soybean	plastid	72.51	89.4
KRH22987	Soybean	cytosol, mitochondrion, plastid	86.17	89.18
KRH29876	Soybean	mitochondrion	64.76	63.05
KRH25009	Soybean	mitochondrion	65.26	63.03
VIT_06s0004g04010.t01	Wine grape	plastid	54.81	52.76
Solyc11g073010.1.1	Tomato	plastid	51.77	48.42
CDY68540	Canola	plastid	44.35	47.99
CDX93621	Canola	cytosol	36.09	47.66
CDX88720	Canola	plastid	43.84	47.27
CDX71078	Canola	cytosol, mitochondrion, nucleus, plastid	44.01	47.03
CDY60562	Canola	cytosol	43.68	46.84
PGSC0003DMT400040200	Potato	plastid	47.22	46.43
CDY49576	Canola	cytosol	43.0	46.28
PGSC0003DMT400028204	Potato	plastid	46.04	45.73
Solyc06g005280.1.1	Tomato	plastid	46.04	45.65
AT2G28650.1	Thale cress	plastid	44.01	45.55
KRG95862	Soybean	plastid	47.39	45.47
KRH67580	Soybean	plastid	48.57	45.35
Bra020294.1-P	Field mustard	cytosol, plastid	47.22	45.09
Bra006696.1-P	Field mustard	cytosol	47.05	45.0
PGSC0003DMT400078145	Potato	mitochondrion	46.88	44.55
CDX95128	Canola	cytosol, nucleus, plastid	43.17	44.06
Bra018685.1-P	Field mustard	cytosol, nucleus, plastid	42.83	43.94
GSMUA_AchrUn_...	Banana	cytosol	42.33	43.88
AT5G59730.1	Thale cress	cytosol, plastid	46.88	43.85
CDY04577	Canola	plastid	40.13	43.83
Solyc06g075610.1.1	Tomato	plastid	45.7	43.5
Bra002537.1-P	Field mustard	cytosol, nucleus, plastid	45.87	43.31
CDX80235	Canola	cytosol, nucleus, plastid	45.7	43.29
CDY60967	Canola	plastid	27.82	43.08
GSMUA_Achr10P...	Banana	cytosol	32.55	42.79
KRH32349	Soybean	plastid	44.52	42.44
KRH19755	Soybean	mitochondrion, plastid	36.76	41.37
AT1G07725.1	Thale cress	cytosol, nucleus, plastid	42.16	40.65
GSMUA_Achr10P...	Banana	mitochondrion	41.82	40.33
CDY31722	Canola	mitochondrion, plastid	39.46	40.21
CDX77195	Canola	mitochondrion, plastid	39.46	40.07
AT2G28640.1	Thale cress	mitochondrion	40.81	40.0
Bra035682.1-P	Field mustard	mitochondrion, plastid	40.13	39.67
GSMUA_Achr6P34400_001	Banana	mitochondrion	40.3	39.57
GSMUA_Achr7P15340_001	Banana	mitochondrion	39.97	38.85
CDY60968	Canola	cytosol	5.9	33.33
KRH47637	Soybean	endoplasmic reticulum	30.86	29.23
KRG90170	Soybean	cytosol	17.37	27.61
KRH06215	Soybean	cytosol	31.03	27.59
KRH18527	Soybean	cytosol	21.92	26.86
KRH01279	Soybean	cytosol	29.85	26.03
KRH45035	Soybean	cytosol	29.68	25.84
KRH03960	Soybean	nucleus	29.01	25.83
KRH57228	Soybean	cytosol	29.01	25.79
KRH17115	Soybean	cytosol	26.48	24.38
KRH34637	Soybean	cytosol	25.97	24.02
KRH63230	Soybean	cytosol	25.46	23.97
KRG92152	Soybean	cytosol	26.14	23.92
KRH54704	Soybean	cytosol	25.3	23.77
KRH72760	Soybean	cytosol	25.46	23.59
KRG88728	Soybean	cytosol	25.63	23.31
KRH70050	Soybean	nucleus	25.3	21.16
KRG93132	Soybean	cytosol	16.53	20.85
KRH36360	Soybean	cytosol	21.25	20.83
KRH06895	Soybean	cytosol	22.77	18.93
KRG94595	Soybean	nucleus	22.43	18.71

Protein Annotations

Gene3D:1.20.1280.170	EntrezGene:100801773	MapMan:22.6.3.1	UniProt:A0A0R0FWR0	EMBL:ACUP02009134	InterPro:Cullin_repeat-like_dom_sf
InterPro:Exo70	EnsemblPlantsGene:GLYMA_15G042400	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	EnsemblPlants:KRH10327
ProteinID:KRH10327	ProteinID:KRH10327.1	PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF17	SUPFAM:SSF74788
UniParc:UPI0006EE1AC3	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:3322507..3324890

Molecular Weight (calculated)

66993.8 Da

IEP (calculated)

6.215

GRAVY (calculated)

-0.261

Length

593 amino acids

Sequence
(BLAST)

001: MPKMGLKNLF FFKTSPSPPS SSPTRTFSDS LMDQNIETAR AIISKWELIS PSDQAAPLFS NTRQEAKQYL NAVMSLQSTM QHLVALDSSS DTLIQAHFLM
101: QLAMKRLQTE FYRILTQNRD NLDPESVAST DHRSSSVSDD GTDFSDDEFR FAGDSVSTVA MADLKAIAEC MVSAGYSKEC VKIYILMRKS MVDEALYHFG
201: VERLTFSQIQ KMDWEVLESK IKSWLNAVRF VVRTLFHGEK TLCDYVFGSP ERKIAESCFA AVCREGAESL FAFPEKVAKC KKTPEKMFRT LDLYEAISDN
301: RQQIESIFSS ESTSCIRSQV TVSQARLGEA ARTMLINFES AIQKESSKIP LPGGGIHPLT RYVMNYIAFL ADYGDALAEI VADWPQNSLP ESYYRSPDRE
401: GKNRSSEIAE RMAWLILVLL CKLDGKAELY KEVALSYLFL ANNMQYVVVK VRNSNLGFIL GEDWLTKHEL KVKEYVSKYE HVGWNKVFLS LPETPTAEQA
501: RAILECFDVA FHDACKAQFS WVVPDPKLRE EIKASIASKF VPSHRELFEK YQVGSETVFG LTPDDLEHSL SDILSGSVSS SHSPSPPHRF KRP

Best Arabidopsis Sequence Match ( AT5G59730.1 )
(BLAST)

001: MGKHLFRSSP PPEKPTAHLS LAESAVQECM SNINTVISKW TSPAASSSDD FLFSTNSRRE AEEFVTAVRH LQSTMHRLVS VNPSSEKLIY AQNLMQSAMK
101: LLESEFHRVL KANREYLDPE CVSVRSYRSS RFSTSTTTSV SDSEDESSYE ENADEEHRFS GGDSDAMDDL KMIADCMIST GYAKECVRVY KTVRKSIVDE
201: TLHNLQMERF NLHQVQKMDW EILESKIKTW LKAVKLAVRK LFFGERILAD HVFSSSGLIV ESSFTEITQE GALILFTFPE YASKIKKLTP EKMFRFLDMY
301: EALANLYVEI ESIFYFESAA AVRSQVINSL ARLGDATRLM MTDFESAIQK ETSKTPIIGG GVHPLTRYVM NYLSFLADYS DSIAAIFENW KLSVPTPLPD
401: SLYISGGDEA NPEDLYSSPV SVRIAWVILL TLCKIDGKAQ PYKDVALSYL FLANNLQYVV VKVRSSTLKV LLGDDWVFRH EEKVKLYADK FEKLAWGKVL
501: DLLPEIPTDE ISPEEAKVLV ARFNDEFETS YRKQTSWVIP DPKLRDQIKI TLSQKLMLVC TEFYRMNRFA YGMVGDNEAI SRYTPEDIGN YLSDLYFGSR
601: GSGSVSTAGG SGSGSGSGTG SSSTGKARGG RSSH

Arabidopsis Description

ATEXO70H7AT5g59730/mth12_130 [Source:UniProtKB/TrEMBL;Acc:Q9FN91]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.