Factsheet for Solyc06g075610.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078145	Potato	mitochondrion	94.06	93.91
Solyc11g073010.1.1	Tomato	plastid	63.08	61.99
Solyc06g005280.1.1	Tomato	plastid	57.95	60.37
VIT_06s0004g04010.t01	Wine grape	plastid	53.13	53.73
KRH29876	Soybean	mitochondrion	49.28	50.41
KRH25009	Soybean	mitochondrion	48.96	49.67
KRH22988	Soybean	plastid	37.24	48.23
CDY60562	Canola	cytosol	42.22	47.56
CDX88720	Canola	plastid	41.89	47.45
CDY68540	Canola	plastid	41.73	47.45
CDX71078	Canola	cytosol, mitochondrion, nucleus, plastid	41.89	47.03
CDY49576	Canola	cytosol	41.57	47.01
CDX93621	Canola	cytosol	33.71	46.77
KRH22987	Soybean	cytosol, mitochondrion, plastid	42.86	46.6
KRH10327	Soybean	plastid	43.5	45.7
Bra006696.1-P	Field mustard	cytosol	45.43	45.65
AT2G28650.1	Thale cress	plastid	41.41	45.03
Bra020294.1-P	Field mustard	cytosol, plastid	44.78	44.93
Bra002537.1-P	Field mustard	cytosol, nucleus, plastid	45.26	44.9
Solyc09g005840.1.1	Tomato	plastid	45.75	44.81
CDX80235	Canola	cytosol, nucleus, plastid	44.94	44.73
AT5G59730.1	Thale cress	cytosol, plastid	45.43	44.64
Solyc09g005830.1.1	Tomato	plastid	45.1	44.04
GSMUA_AchrUn_...	Banana	cytosol	40.13	43.71
CDY04577	Canola	plastid	37.88	43.46
CDY60968	Canola	cytosol	7.22	42.86
CDY60967	Canola	plastid	26.32	42.82
CDX95128	Canola	cytosol, nucleus, plastid	39.49	42.34
Bra018685.1-P	Field mustard	cytosol, nucleus, plastid	39.17	42.21
GSMUA_Achr10P...	Banana	cytosol	30.5	42.13
AT2G28640.1	Thale cress	mitochondrion	40.45	41.65
CDY31722	Canola	mitochondrion, plastid	38.2	40.89
AT1G07725.1	Thale cress	cytosol, nucleus, plastid	39.97	40.49
CDX77195	Canola	mitochondrion, plastid	37.88	40.41
Bra035682.1-P	Field mustard	mitochondrion, plastid	38.84	40.33
Solyc05g054820.1.1	Tomato	plastid	41.25	39.84
GSMUA_Achr10P...	Banana	mitochondrion	39.33	39.84
GSMUA_Achr7P15340_001	Banana	mitochondrion	38.84	39.67
GSMUA_Achr6P34400_001	Banana	mitochondrion	36.76	37.91
Solyc06g062990.1.1	Tomato	cytosol	28.89	30.2
Solyc03g122240.2.1	Tomato	nucleus	28.09	29.86
Solyc03g111320.1.1	Tomato	cytosol	29.21	27.37
Solyc10g081940.1.1	Tomato	cytosol	27.29	26.56
Solyc08g066070.1.1	Tomato	cytosol	26.81	26.47
Solyc04g009740.2.1	Tomato	nucleus	27.13	25.96
Solyc02g088800.1.1	Tomato	nucleus	27.45	25.95
Solyc11g006620.1.1	Tomato	cytosol	26.65	25.23
Solyc05g024340.1.1	Tomato	cytosol	22.95	24.16
Solyc03g115070.1.1	Tomato	cytosol	23.6	23.15
Solyc01g009880.2.1	Tomato	nucleus	23.11	21.69
Solyc02g094370.1.1	Tomato	cytosol	22.79	19.89

Protein Annotations

EnsemblPlants:Solyc06g075610.1.1	EnsemblPlantsGene:Solyc06g075610.1	Gene3D:1.20.1280.170	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF17	PFAM:PF03081	SEG:seg
SUPFAM:SSF74788	UniParc:UPI0002766D41	UniProt:K4C9S6	MapMan:22.6.3.1	:	:

Description

No Description!

Coordinates

chr6:-:46997230..46999101

Molecular Weight (calculated)

69681.7 Da

IEP (calculated)

5.049

GRAVY (calculated)

-0.240

Length

623 amino acids

Sequence
(BLAST)

001: MTGFFSSSKH SSPPHASSQS TTHKFSDTLM EDTLKNAEEI IKRWDLDDSS SNLFQDSRTE AKQYLEAVID LQHAMQFVVK ESATSQLLVP AQNLMKIAIE
101: RLQKEFFNIL AGNRYFLDSE GGSRESTRSS GSDEDQGSED DNAEIESRFP ELSIDDESEK VSVAVDLKAI ADCMIEAGYG KECAKIYELN RKSVIEETLY
201: YLGVENISPS TVQKMNWKDL EKKIKIWLNA VKVAVSTLFY GERILCDQVF SISDSVRESC FTGIAKDSAL TLFTFPEMVA KYKKLSLEKM FRILDLYDSI
301: SELLSEIEVI FGFDSMVAVK SQALTSMAKL RDAARAMLAE FESAIKKDSS KVVAGGGIHP LTRYVMNYLI FLSDYSGPIS DIIADWKAVV KSPLPESYLL
401: SPIADDGDSP SCIVSVRLTW LILVLLCKLD GKAGFYGDVP LSYLFLANNL NYVVSKVRQS SLKLLLGPDW LSNHEAKVEQ YMANFKRMGW SSVMTSLPEN
501: STAEISPAEA KECFCKFSLS FEETYWKQRS WVIPDPKLRD EVKISLANKI LSAYQPFYQK HGEKVARMES GGGVESIVRF APDNVQNYLS DLFHGSTENS
601: STSSSHGSSS RSTPTWSSPL RGR

Best Arabidopsis Sequence Match ( AT5G59730.1 )
(BLAST)

001: MGKHLFRSSP PPEKPTAHLS LAESAVQECM SNINTVISKW TSPAASSSDD FLFSTNSRRE AEEFVTAVRH LQSTMHRLVS VNPSSEKLIY AQNLMQSAMK
101: LLESEFHRVL KANREYLDPE CVSVRSYRSS RFSTSTTTSV SDSEDESSYE ENADEEHRFS GGDSDAMDDL KMIADCMIST GYAKECVRVY KTVRKSIVDE
201: TLHNLQMERF NLHQVQKMDW EILESKIKTW LKAVKLAVRK LFFGERILAD HVFSSSGLIV ESSFTEITQE GALILFTFPE YASKIKKLTP EKMFRFLDMY
301: EALANLYVEI ESIFYFESAA AVRSQVINSL ARLGDATRLM MTDFESAIQK ETSKTPIIGG GVHPLTRYVM NYLSFLADYS DSIAAIFENW KLSVPTPLPD
401: SLYISGGDEA NPEDLYSSPV SVRIAWVILL TLCKIDGKAQ PYKDVALSYL FLANNLQYVV VKVRSSTLKV LLGDDWVFRH EEKVKLYADK FEKLAWGKVL
501: DLLPEIPTDE ISPEEAKVLV ARFNDEFETS YRKQTSWVIP DPKLRDQIKI TLSQKLMLVC TEFYRMNRFA YGMVGDNEAI SRYTPEDIGN YLSDLYFGSR
601: GSGSVSTAGG SGSGSGSGTG SSSTGKARGG RSSH

Arabidopsis Description

ATEXO70H7AT5g59730/mth12_130 [Source:UniProtKB/TrEMBL;Acc:Q9FN91]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.