Factsheet for Solyc01g009880.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013431	Potato	nucleus	95.48	95.48
CDX97230	Canola	cytosol	19.13	67.2
CDX69666	Canola	cytosol	18.98	66.67
Solyc05g024340.1.1	Tomato	cytosol	58.43	65.54
VIT_01s0146g00160.t01	Wine grape	nucleus	55.42	56.27
Bra006183.1-P	Field mustard	nucleus	46.99	49.76
CDY69943	Canola	cytosol	46.84	49.6
CDX78509	Canola	nucleus	46.84	49.6
AT5G13150.1	Thale cress	nucleus	47.59	48.39
Bra008852.1-P	Field mustard	nucleus	46.69	48.29
Os12t0165600-01	Rice	cytosol, plasma membrane	34.94	47.44
KRH36360	Soybean	cytosol	42.47	46.61
GSMUA_Achr6P07200_001	Banana	nucleus	42.77	42.97
TraesCS5B01G122500.1	Wheat	plastid	41.87	41.99
Solyc02g094370.1.1	Tomato	cytosol	44.88	41.74
GSMUA_Achr6P25750_001	Banana	endoplasmic reticulum	42.47	40.23
KRG93132	Soybean	cytosol	28.31	40.0
Zm00001d023513_P001	Maize	plastid	40.66	39.53
Zm00001d041908_P001	Maize	plastid	39.76	39.0
Zm00001d004846_P001	Maize	cytosol, plastid	39.91	38.74
Os11t0167600-00	Rice	plasma membrane	40.21	38.58
EES16704	Sorghum	plastid	40.21	38.25
Zm00001d053192_P001	Maize	cytosol, plastid	39.31	38.21
TraesCS5D01G130800.1	Wheat	plastid	41.42	38.19
EES08037	Sorghum	cytosol, plastid	39.16	37.85
TraesCS4D01G109600.1	Wheat	cytosol	40.06	37.46
TraesCS5A01G122400.1	Wheat	mitochondrion	41.57	37.35
TraesCS4B01G112100.1	Wheat	cytosol	39.91	37.32
TraesCS4A01G208500.1	Wheat	cytosol	39.76	37.29
HORVU4Hr1G020050.1	Barley	cytosol, plastid	39.61	37.15
GSMUA_Achr6P18090_001	Banana	nucleus	23.95	34.49
Solyc06g062990.1.1	Tomato	cytosol	29.52	32.89
Solyc08g066070.1.1	Tomato	cytosol	30.87	32.49
Solyc03g122240.2.1	Tomato	nucleus	28.31	32.08
Solyc03g111320.1.1	Tomato	cytosol	30.87	30.83
HORVU5Hr1G039240.1	Barley	plastid	33.73	30.77
Solyc02g088800.1.1	Tomato	nucleus	28.46	28.68
Solyc10g081940.1.1	Tomato	cytosol	27.41	28.44
Solyc03g115070.1.1	Tomato	cytosol	26.66	27.87
Solyc04g009740.2.1	Tomato	nucleus	27.11	27.65
Solyc11g006620.1.1	Tomato	cytosol	26.36	26.6
Solyc11g073010.1.1	Tomato	plastid	24.25	25.39
Solyc05g054820.1.1	Tomato	plastid	24.1	24.81
Solyc09g005830.1.1	Tomato	plastid	23.19	24.14
Solyc06g005280.1.1	Tomato	plastid	21.54	23.91
Solyc09g005840.1.1	Tomato	plastid	22.74	23.74
Solyc06g075610.1.1	Tomato	plastid	21.69	23.11
GSMUA_Achr10P...	Banana	cytosol	25.3	21.59

Protein Annotations

EnsemblPlants:Solyc01g009880.2.1	EnsemblPlantsGene:Solyc01g009880.2	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	InterPro:Cullin_repeat-like_dom_sf
InterPro:Exo70	ncoils:Coil	PANTHER:PTHR12542	PANTHER:PTHR12542:SF15	PFAM:PF03081	SEG:seg
SUPFAM:SSF74788	UniParc:UPI00027618EE	UniProt:K4ATI3	MapMan:22.6.3.1	:	:

Description

No Description!

Coordinates

chr1:+:4413095..4415237

Molecular Weight (calculated)

75963.8 Da

IEP (calculated)

6.476

GRAVY (calculated)

-0.565

Length

664 amino acids

Sequence
(BLAST)

001: MVKNHLDKNG SFTGSPKPPH PTTSTDPHSR KGSQEELDHS LNHHNEDVKK LSDDIDRFID ELSTCHDKSN PPKVPEIIET FSKIIESKIS KHSTSENSST
101: RLCKMTEEDN FFVEAVTRLS KLTNSLSEFP LGSTTTRSLN RTSMVLQRAM TLMEEDLRAL LEDSSSSHVK VHKNSSFNSN RLLVDGELCS LTLSESSGEE
201: EYPSFPPDVV TRMNRIASTM IMAGYETECC QVYSTTRRNA CFEQMKKLEF EKINMEDVQR MQWDSLEGEI TRWIRAVKNC STTLFPGEKR LGDSVFSESP
301: MNSQTLFSNL ARAIVIQLLD FAEAVTMTKR SAEKLFKYLD MYEALRDLIP SIKNSCSNEC ENELNSEIQA TIDRLGESAV SIFSDLENSI KNDVARTPVP
401: GGAVHPLTRY VMNYLKYACE YKITLEHIFQ QHVKLEESNA NVNANSSAKF KPILEVEAEN DSPHCNSETT PFSIQQVTIM DLLDTNLEAK SNLYRDPALR
501: HIFLMNNGRY ILQKVKGSAE IHQVMGDTWC RRRSTIVRHY HKNYQRETFG KVLQILTHDG MQVHGKVAKT TVKERFKNFN VIFDEIHRSQ STWVVSDEQL
601: QSELRVSISA LVIPAYRSFF GRFRQYLDNA KQAEKYIKYQ PEDIEILIDD FFDGNSTSMA RRKT

Best Arabidopsis Sequence Match ( AT5G13150.1 )
(BLAST)

001: MEKSGNHHHA NESSENHDHK SEDHENKQHS DELHSSTPES QSESSEHSLV EVMEAVVDFI QTLSSEKDPL GEISPAVESF PEAVDSLVSK MESSGLGRDE
101: TEDSVFIDAV NRISKSVMRL RELKLDSTPV SSWLNRASSV QHRAVSLLDE EFRHLLDRSR EEEKKNNNNN NHHDGSNSDH NNSSTNDSDR CVLQDHEEAE
201: EESFHDFSPE SISTLKKIAG AMISAGYEAE CCMSYEMSRR HAFKEELTEV GFEGINVEDV QRIGWESLEG EIASWISIVR RCSTVLFPGE LSLCNAVFPD
301: QDHSSVRKRL FTGLVSAVTI RFLDFSGAVV LTKRSSEKLF KFLDMYETLR DLIPAVEQSD SDLIQEIKLA QTRLGEAAVT IFGELEKSIK SDNGRTPVPS
401: GAVHPLTRYT MNYLKYACEY KETLDQVFQH YEANQTDNKP EPETKPRQQQ REDDEEYKVS AFARQMIRVM ELLDANLEIK SRLYRDPSLR FIFLMNNGRY
501: ILQKIKGSIE IRDLMGQSWT RKRSTELRQY HKSYQRETWG KVLQCMNQEG LQVNGKVSKP VLKERFKIFN AMFDEIHKTQ STWIVSDEQM QSELRVSISS
601: LVIPAYRSFF GRYKQHLDSG KQTDKYVKYQ PEDIESFIDD LFDGNPTSMA RKR

Arabidopsis Description

ATEXO70C1Exocyst subunit exo70 family protein C1 [Source:UniProtKB/TrEMBL;Acc:Q9FY95]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.