Factsheet for Solyc09g005840.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400061494	Potato	plastid	94.03	94.17
Solyc09g005830.1.1	Tomato	plastid	77.04	76.8
VIT_08s0040g02730.t01	Wine grape	plastid	58.8	58.9
KRG95862	Soybean	plastid	52.67	54.21
KRH67580	Soybean	plastid	52.99	53.07
AT3G09520.1	Thale cress	cytosol	51.57	52.23
CDY41297	Canola	mitochondrion	49.69	51.97
Bra034072.1-P	Field mustard	mitochondrion	49.53	51.81
CDY44712	Canola	cytosol	48.9	50.65
CDY41604	Canola	cytosol	49.21	50.57
Bra029772.1-P	Field mustard	cytosol	48.43	50.16
KRH32349	Soybean	plastid	48.9	50.0
KRH19755	Soybean	mitochondrion, plastid	40.09	48.39
Solyc11g073010.1.1	Tomato	plastid	46.54	46.69
Solyc06g005280.1.1	Tomato	plastid	43.71	46.49
Solyc06g075610.1.1	Tomato	plastid	44.81	45.75
GSMUA_AchrUn_...	Banana	cytosol	40.41	44.93
CDX73983	Canola	mitochondrion	43.71	44.84
Bra001305.1-P	Field mustard	mitochondrion	43.71	44.84
AT3G09530.1	Thale cress	mitochondrion	44.81	44.74
CDY07931	Canola	cytosol	43.71	44.41
Solyc05g054820.1.1	Tomato	plastid	43.71	43.1
GSMUA_Achr10P...	Banana	mitochondrion	40.88	42.28
GSMUA_Achr7P15340_001	Banana	mitochondrion	38.68	40.33
GSMUA_Achr10P...	Banana	cytosol	28.46	40.13
GSMUA_Achr6P34400_001	Banana	mitochondrion	37.42	39.4
Solyc03g122240.2.1	Tomato	nucleus	28.93	31.4
Solyc06g062990.1.1	Tomato	cytosol	29.09	31.04
Solyc03g111320.1.1	Tomato	cytosol	29.87	28.57
Solyc08g066070.1.1	Tomato	cytosol	28.3	28.53
Solyc02g088800.1.1	Tomato	nucleus	28.14	27.16
Solyc10g081940.1.1	Tomato	cytosol	26.57	26.41
Solyc11g006620.1.1	Tomato	cytosol	26.73	25.84
Solyc04g009740.2.1	Tomato	nucleus	26.42	25.81
Solyc03g115070.1.1	Tomato	cytosol	23.11	23.15
Solyc05g024340.1.1	Tomato	cytosol	21.54	23.14
Solyc01g009880.2.1	Tomato	nucleus	23.74	22.74
Solyc02g094370.1.1	Tomato	cytosol	24.37	21.71

Protein Annotations

EnsemblPlants:Solyc09g005840.1.1	EnsemblPlantsGene:Solyc09g005840.1	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	InterPro:Cullin_repeat-like_dom_sf
InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF38	PFAM:PF03081	SEG:seg	SUPFAM:SSF74788
UniParc:UPI000276B31B	UniProt:K4CQ74	MapMan:22.6.3.1	:	:	:

Description

No Description!

Coordinates

chr9:-:585410..587320

Molecular Weight (calculated)

72389.5 Da

IEP (calculated)

6.826

GRAVY (calculated)

-0.327

Length

636 amino acids

Sequence
(BLAST)

001: MARRRIGMRE ICCSPKSSSK SHDSPNSPST SLFSSPSRFS FSPSRPSFSD SVMNRTLEMA EPMIMKWDPD TTNYAKVTSL FYESRGEAND FIKGVFNLQK
101: AMHFHSMENS KSDKLVRAQS LMQIAMKRLQ KEFYQILSMN RAHLDPESIT TVSSRTSTRS SLSEFEEEEE DDRIVAVAGE SISEVEDVSN VAMADLRLIA
201: ECMISSGYGK ECVKIYKVIR KSIIDEAIYR LGVEKLSSSQ VHKMDWEVLD LKIKDWLRAA DVAVKVLFNG ERILCDHVFL SNDSIRESCF TEISKDGSMI
301: LFSFPEIVAK NCKKSPEKVF RLLDMYTAIA EHWPEIEAIF SSDSESVIRS QALTSHDKLG ESIRTALAEF ETVLQKESSK TPIAGGGIHH LTVDVMDYVT
401: LLADYSNVLP DILAESPPPA KGSLPESYFG IADTNDSPAP AISLRFAWLI LILLCKLDGK AKHYKDVSLA YLFLANNLRY IIVKVRSSNL KYLVGENWIS
501: KHDEKVKQFA SNHERLGWSH VIESLPREPN TSMTPQEVKE IFKRFNSSFE QAHRKYSMCM VSDSNLRDEL KISITEKLLP TYREFYNKHR NTIVKERHSA
601: HVVRFSPEEV GHRLSDLFFG PIELERCLSF EFSPSR

Best Arabidopsis Sequence Match ( AT3G09520.1 )
(BLAST)

001: MMTRKAMINI CCVATTPSKY PPPPPLTLTP RQSLESAAIY GVIESAADII ERWNTETNTF AKVTCMFYEN KPEAMMFIER VKDLQKTMDV LVSEDPNSER
101: LLRSHKLMQI AMKRLQKEFY QILSMNRAYL DPESVSTRSS LTSARSSYSD FPDYVEDLDT IIELEEVSTN VMTDLKSIAE CMIGSGYAKE CLSIYKSIRK
201: SIIDEGIYRL EVEKTSTGKV KKMSWEVMEL KIRSWLKAVK VSMETLFKGE KILCDHVFES SDAIRESCFS DISRDGALLL FGFPEIINTK TSKKHSPPEK
301: VFRLLDMYTA IAGNWQAIES IFSFDSISVV RSLALKSLIS LSESIRSLLV EFESGIQKDS SKVVVPGGGV HPLTISVMDH LSLLADYSNV LVDILAGSPP
401: PDRSLLPESY FNVSESDDSP SSELTIRFAW IILVLLCKID RKSIHYKDFS IQYLFLTNNL QHVVSRARSS NLKNLLGEDW ITRHFAKMRQ FAGSYKRLAW
501: GPVVATLPEN RTVEMTPEEV KERFEKFSES FENAYSKHSV CVVADPNIRD EIKVSISRKL VPIYREFYNT RGSVILGEGD GARNLNSVVR FTPEDIENYL
601: SDLFREKGSS GNSSASSPSS CRSRQSMS

Arabidopsis Description

ATEXO70H4Exocyst subunit exo70 family protein H4 [Source:UniProtKB/TrEMBL;Acc:Q9SF51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.