Factsheet for PGSC0003DMT400061494

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g005840.1.1	Tomato	plastid	94.17	94.03
PGSC0003DMT400061435	Potato	plastid	78.58	77.61
PGSC0003DMT400061436	Potato	plastid	77.8	76.83
VIT_08s0040g02730.t01	Wine grape	plastid	58.74	58.74
KRG95862	Soybean	plastid	53.39	54.85
KRH67580	Soybean	plastid	54.02	54.02
AT3G09520.1	Thale cress	cytosol	51.65	52.23
CDY41297	Canola	mitochondrion	49.92	52.14
Bra034072.1-P	Field mustard	mitochondrion	49.76	51.97
CDY44712	Canola	cytosol	48.98	50.65
CDY41604	Canola	cytosol	49.29	50.57
Bra029772.1-P	Field mustard	cytosol	48.66	50.33
KRH32349	Soybean	plastid	49.29	50.32
KRH19755	Soybean	mitochondrion, plastid	40.79	49.15
PGSC0003DMT400028204	Potato	plastid	44.41	47.24
PGSC0003DMT400078145	Potato	mitochondrion	45.35	46.15
PGSC0003DMT400040200	Potato	plastid	43.46	45.77
CDX73983	Canola	mitochondrion	43.94	45.0
Bra001305.1-P	Field mustard	mitochondrion	43.94	45.0
CDY07931	Canola	cytosol	44.09	44.73
GSMUA_AchrUn_...	Banana	cytosol	40.16	44.58
AT3G09530.1	Thale cress	mitochondrion	44.57	44.43
PGSC0003DMT400060448	Potato	plastid	44.25	43.36
GSMUA_Achr10P...	Banana	mitochondrion	40.94	42.28
GSMUA_Achr7P15340_001	Banana	mitochondrion	38.9	40.49
GSMUA_Achr10P...	Banana	cytosol	28.19	39.69
GSMUA_Achr6P34400_001	Banana	mitochondrion	37.48	39.4
PGSC0003DMT400058947	Potato	cytosol	29.92	31.25
PGSC0003DMT400012539	Potato	extracellular	28.98	30.87
PGSC0003DMT400090181	Potato	cytosol	30.39	28.94
PGSC0003DMT400043775	Potato	cytosol	25.67	28.5
PGSC0003DMT400065456	Potato	cytosol	27.56	27.91
PGSC0003DMT400003687	Potato	nucleus	28.66	27.66
PGSC0003DMT400032221	Potato	nucleus	27.87	26.78
PGSC0003DMT400072333	Potato	cytosol	26.61	26.41
PGSC0003DMT400013431	Potato	nucleus	24.57	23.49
PGSC0003DMT400006075	Potato	cytosol	21.89	23.48
PGSC0003DMT400063083	Potato	cytosol	22.99	22.99
PGSC0003DMT400052043	Potato	nucleus	24.25	22.06

Protein Annotations

EntrezGene:102581054	MapMan:22.6.3.1	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150
GO:GO:0009987	UniProt:M1C7K5	PFAM:PF03081	EnsemblPlantsGene:PGSC0003DMG400023930	PGSC:PGSC0003DMG400023930	EnsemblPlants:PGSC0003DMT400061494
PANTHER:PTHR12542	PANTHER:PTHR12542:SF38	SUPFAM:SSF74788	UniParc:UPI000296D76E	RefSeq:XP_006345719.1	SEG:seg

Description

ATEXO70H4 [Source:PGSC_GENE;Acc:PGSC0003DMG400023930]

Coordinates

chr9:+:7330168..7332178

Molecular Weight (calculated)

72200.2 Da

IEP (calculated)

6.696

GRAVY (calculated)

-0.289

Length

635 amino acids

Sequence
(BLAST)

001: MARRRIGMRE ICCSPKSSSK SDGPNSPSTS LFSSPSRFSF SPSRPSFSDS VMNRTLEMAE PMIMKWDPNS TNYAKVTSLF YESRGEANEF IKCVYNLQKA
101: MHFHSMENSK SDKLVRAQSL MQVAVKRLQK EFYQILSMNR AHLDPESITT VSSRTSARSS LSEFEDEEED DRIVVVAGES ISEVEDVSNV AMADLRLIAE
201: CMISSGYAKE CVKIYKVIRK SIIDEAIYRL DVEKLSSSQV HKMDWEVLDL KIKDWLRAAD VAVKILFNGE RILCDHVFLS NDSIRESCFT EISKDGSMIL
301: FSFPEIVAKN CKKSPEKVFR LLDMYTAIAE HWPEIEAIFS SDSESVIRSQ ALTSHDKLGE SIRTALAEFE TVLQKESSKT PIAGGGIHHL TVDVMDYVTL
401: LADYSNVLSD ILAESPPPAK GSLPESYFGI ADTDESPAPA ISLRFAWLIL ILLCKLDGKA KHYKDASFAY LFLANNLRYI IVKVRSSNLK YLLGENWISK
501: HEEKVKQFAS NYERLGWSHV IESVPREPNA SMAPQQVKEI FKRFNSSFEQ AHRKHSMCVV SDSYLRDELK VSIAEKILPA YREFYNKHRN TIIKERHSAH
601: VVRFSPEDVA HQLSDLFFGP IELERCLSFE FSPSR

Best Arabidopsis Sequence Match ( AT3G09520.1 )
(BLAST)

001: MMTRKAMINI CCVATTPSKY PPPPPLTLTP RQSLESAAIY GVIESAADII ERWNTETNTF AKVTCMFYEN KPEAMMFIER VKDLQKTMDV LVSEDPNSER
101: LLRSHKLMQI AMKRLQKEFY QILSMNRAYL DPESVSTRSS LTSARSSYSD FPDYVEDLDT IIELEEVSTN VMTDLKSIAE CMIGSGYAKE CLSIYKSIRK
201: SIIDEGIYRL EVEKTSTGKV KKMSWEVMEL KIRSWLKAVK VSMETLFKGE KILCDHVFES SDAIRESCFS DISRDGALLL FGFPEIINTK TSKKHSPPEK
301: VFRLLDMYTA IAGNWQAIES IFSFDSISVV RSLALKSLIS LSESIRSLLV EFESGIQKDS SKVVVPGGGV HPLTISVMDH LSLLADYSNV LVDILAGSPP
401: PDRSLLPESY FNVSESDDSP SSELTIRFAW IILVLLCKID RKSIHYKDFS IQYLFLTNNL QHVVSRARSS NLKNLLGEDW ITRHFAKMRQ FAGSYKRLAW
501: GPVVATLPEN RTVEMTPEEV KERFEKFSES FENAYSKHSV CVVADPNIRD EIKVSISRKL VPIYREFYNT RGSVILGEGD GARNLNSVVR FTPEDIENYL
601: SDLFREKGSS GNSSASSPSS CRSRQSMS

Arabidopsis Description

ATEXO70H4Exocyst subunit exo70 family protein H4 [Source:UniProtKB/TrEMBL;Acc:Q9SF51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.