Factsheet for PGSC0003DMT400052043

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g094370.1.1	Tomato	cytosol	94.84	92.72
Bra023443.1-P	Field mustard	cytosol	35.67	57.11
Os12t0165600-01	Rice	cytosol, plasma membrane	36.25	51.74
PGSC0003DMT400006075	Potato	cytosol	39.97	47.13
KRH06895	Soybean	cytosol	48.14	47.12
KRG94595	Soybean	nucleus	47.85	46.98
KRH70050	Soybean	nucleus	47.71	46.97
GSMUA_Achr6P07200_001	Banana	nucleus	43.84	46.29
CDX69615	Canola	cytosol, nucleus, plastid	45.13	45.99
Bra008789.1-P	Field mustard	cytosol, nucleus, plastid	44.99	45.97
CDY09840	Canola	cytosol, nucleus, plastid	44.84	45.63
PGSC0003DMT400013431	Potato	nucleus	43.12	45.33
TraesCS5B01G122500.1	Wheat	plastid	42.98	45.32
AT5G13990.1	Thale cress	nucleus	44.56	44.75
CDX85618	Canola	nucleus	44.41	44.41
Bra006228.1-P	Field mustard	nucleus	43.27	44.35
CDX78551	Canola	nucleus	43.12	44.2
CDX70532	Canola	nucleus	43.12	44.13
EES08037	Sorghum	cytosol, plastid	43.41	44.1
Zm00001d004846_P001	Maize	cytosol, plastid	42.98	43.86
Zm00001d053192_P001	Maize	cytosol, plastid	42.84	43.78
Zm00001d023513_P001	Maize	plastid	42.84	43.78
Zm00001d041908_P001	Maize	plastid	42.26	43.57
EES16704	Sorghum	plastid	43.27	43.27
Os11t0167600-00	Rice	plasma membrane	42.69	43.06
TraesCS4B01G112100.1	Wheat	cytosol	42.41	41.69
HORVU4Hr1G020050.1	Barley	cytosol, plastid	42.26	41.67
TraesCS5D01G130800.1	Wheat	plastid	42.41	41.11
TraesCS4D01G109600.1	Wheat	cytosol	41.69	40.99
TraesCS4A01G208500.1	Wheat	cytosol	41.4	40.82
GSMUA_Achr6P25750_001	Banana	endoplasmic reticulum	40.83	40.66
TraesCS5A01G122400.1	Wheat	mitochondrion	42.41	40.05
CDX91088	Canola	cytosol, nucleus, vacuole	43.12	38.99
GSMUA_Achr6P18090_001	Banana	nucleus	25.5	38.61
PGSC0003DMT400065456	Potato	cytosol	30.95	34.45
HORVU5Hr1G039240.1	Barley	plastid	35.67	34.2
PGSC0003DMT400012539	Potato	extracellular	28.94	33.89
PGSC0003DMT400058947	Potato	cytosol	29.08	33.39
PGSC0003DMT400090181	Potato	cytosol	29.8	31.18
PGSC0003DMT400043775	Potato	cytosol	24.07	29.37
PGSC0003DMT400032221	Potato	nucleus	25.79	27.23
PGSC0003DMT400072333	Potato	cytosol	24.5	26.72
PGSC0003DMT400003687	Potato	nucleus	25.07	26.6
PGSC0003DMT400063083	Potato	cytosol	24.07	26.46
PGSC0003DMT400028204	Potato	plastid	21.63	25.29
PGSC0003DMT400040200	Potato	plastid	21.35	24.71
PGSC0003DMT400061494	Potato	plastid	22.06	24.25
PGSC0003DMT400060448	Potato	plastid	22.49	24.23
PGSC0003DMT400061435	Potato	plastid	21.78	23.64
PGSC0003DMT400061436	Potato	plastid	21.63	23.48
PGSC0003DMT400078145	Potato	mitochondrion	20.63	23.08
GSMUA_Achr10P...	Banana	cytosol	24.79	22.24

Protein Annotations

EntrezGene:102586747	MapMan:22.6.3.1	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000003	GO:GO:0000145
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829
GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009653	GO:GO:0009856	GO:GO:0009987
GO:GO:0016043	GO:GO:0016049	GO:GO:0030154	GO:GO:0040007	GO:GO:0080092	GO:GO:0090406
UniProt:M1BSP6	PFAM:PF03081	EnsemblPlantsGene:PGSC0003DMG400020200	PGSC:PGSC0003DMG400020200	EnsemblPlants:PGSC0003DMT400052043	PANTHER:PTHR12542
PANTHER:PTHR12542:SF15	SUPFAM:SSF74788	UniParc:UPI000294DCF7	RefSeq:XP_006338810.1	SEG:seg	:

Description

ATEXO70C1 [Source:PGSC_GENE;Acc:PGSC0003DMG400020200]

Coordinates

chr2:-:48144107..48146453

Molecular Weight (calculated)

79525.5 Da

IEP (calculated)

4.395

GRAVY (calculated)

-0.656

Length

698 amino acids

Sequence
(BLAST)

001: MDLTQTSDQT ICNDKQPDIP DEAPPPHETE STEAEIVEQL PTDDGVIKTT DDDGAKTDDD DDDEEVKVEV SSPLPPDLDK VSEEIDQFIS ESSNLKGDDD
101: ESKPPDVPVF VEQFAVLVEA KIDEYDGGDA PVKWSQLAQE EATSFLDIVD RISKLFTSLC RFSTEYKYAY SISRVDGVLQ RAMSYIEEEY KSILYEYKIN
201: TDSDITNSDT SSAKPNPNPN PNSYSSSDTN QDAEQDSASE ENKFPGYSEE IVATLNKFSK ALIAGGYETE CCQVYFIARR KALEESLHKL GFEKYSIDDV
301: QKMNWEPLER EVTAWIATFR HCTNVLFSSE RKLADAVFED QPSISETIFS NLSRGMMIQL LNFAEAVSMT KRAAEKLFKF LDIYETLRDF IPLVDKIFPV
401: SYADELKAEA TLSRGRLGES MVSIFSELEN SIQGDSNKTP VPGGAVHPLT RYIMNYLKYV GEYRDTLEQV FREHQMIERA DSATGSDFDC QNPQAGQSNH
501: HTSSPFETHM IKVMDLLDSN LEGKSRLYKD TSLSSIFMMN NGRYILQKIK GSPEINSLMG DQWYRKRSSD LRQYHKNYQR ETWGKLLQCL NHEGLNVNGK
601: VNKPILKERF KSFNALFDEI HKTQSSWVIS DEQLQSELRV SISNMVIPAY RSFLGRFSQT FTPGRQTEKY VKYQPEEIET DIDELFDGNA TPWGRKKL

Best Arabidopsis Sequence Match ( AT5G13990.1 )
(BLAST)

001: MEKNDKDPDH DDKSKGDEKG DVVSDAHPSD DAHHQDGISN ENVDVVGNAE TDHQDPGDNN VDKVSQGEEA PEIRQTLESL SEELDQFLPT LSLHMEEHKD
101: STEEKGEDGY FQIPQFVGKF LDLFEEKLSK YDSGEPKTVW YQDPEEVSSL LEAVDRVSKL MGLLLNTKSC LDHHESLINH AGSIQQRAMA FLEDEFRIIL
201: EESVTKESVV VTDDSNSQRR STADQQDHQN DVVVSQDHDQ MLVPECGDQE IEYPGYPEDV VVVLRKIAEK MKAGGYGWEC REVYLVGRRN ILMRTLKQDC
301: EFEKVSIDEV QKMSWDTLER EIPIWNKTFK DCSSLFFPGE LKLAERIFPG DEGNLFCIVT HGLAIQFLGF AEAVAMTRRS TEKLFKILDI YETLRDSFPA
401: MEELFPEELR SELRNEVTSA RSRLGETAIH IFCDLEHSIK SDSSKTPVPG GAVHPLTRYT MNYLKYSCEY KDTLEQVFKS HSKMEREEEE PVESGNSAFA
501: SQLMRIMELL DGNLETKSKQ YKDIPLSCIF MMNNGRYIVQ KIKGSAEIHE VMGDTWCRRR SSELRNYHKN YQRETWGKLL GFLGHEGLMH NGKIVKPNLK
601: ERFKSFNATF DEIHKTQTTW VVNDEQLQSE LRVSITAVMI PAYRAFMARF GQYLDPGRQT EKYVKYQPED IEDLIDQLFE GNTSSSSTAT ARRRT

Arabidopsis Description

ATEXO70C2EXO70C2 [Source:UniProtKB/TrEMBL;Acc:A0A178UPG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.