CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
cytosol 1
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023513_P001	Maize	plastid	89.25	91.22
Zm00001d041908_P001	Maize	plastid	86.39	89.07
Os12t0165600-01	Rice	cytosol, plasma membrane	59.74	85.28
TraesCS5B01G122500.1	Wheat	plastid	68.62	72.36
TraesCS5D01G130800.1	Wheat	plastid	68.05	65.97
TraesCS5A01G122400.1	Wheat	mitochondrion	68.77	64.95
EES08037	Sorghum	cytosol, plastid	63.32	64.34
CDX97230	Canola	cytosol	17.19	63.49
CDX69666	Canola	cytosol	17.05	62.96
HORVU5Hr1G039240.1	Barley	plastid	58.74	56.32
GSMUA_Achr6P07200_001	Banana	nucleus	48.85	51.59
Bra023443.1-P	Field mustard	cytosol	31.23	50.0
VIT_01s0146g00160.t01	Wine grape	nucleus	43.55	46.48
GSMUA_Achr6P25750_001	Banana	endoplasmic reticulum	46.42	46.22
GSMUA_Achr6P18090_001	Banana	nucleus	30.37	45.99
CDY69943	Canola	cytosol	39.4	43.86
Bra006183.1-P	Field mustard	nucleus	39.26	43.7
Solyc05g024340.1.1	Tomato	cytosol	36.96	43.58
PGSC0003DMT400006075	Potato	cytosol	36.96	43.58
CDX78509	Canola	nucleus	39.11	43.54
PGSC0003DMT400052043	Potato	nucleus	43.27	43.27
Bra008852.1-P	Field mustard	nucleus	38.4	41.74
AT5G13150.1	Thale cress	nucleus	38.83	41.5
Solyc02g094370.1.1	Tomato	cytosol	42.12	41.18
KRH70050	Soybean	nucleus	41.26	40.62
Solyc01g009880.2.1	Tomato	nucleus	38.25	40.21
PGSC0003DMT400013431	Potato	nucleus	38.25	40.21
KRH06895	Soybean	cytosol	40.54	39.69
CDX69615	Canola	cytosol, nucleus, plastid	38.68	39.42
CDY09840	Canola	cytosol, nucleus, plastid	38.68	39.36
KRG94595	Soybean	nucleus	39.97	39.24
Bra008789.1-P	Field mustard	cytosol, nucleus, plastid	38.4	39.24
AT5G13990.1	Thale cress	nucleus	38.83	38.99
CDX78551	Canola	nucleus	37.82	38.77
KRH36360	Soybean	cytosol	33.52	38.68
CDX70532	Canola	nucleus	37.68	38.56
Bra006228.1-P	Field mustard	nucleus	37.39	38.33
CDX85618	Canola	nucleus	37.97	37.97
OQU82911	Sorghum	cytosol	23.64	34.09
KRG93132	Soybean	cytosol	22.49	33.4
CDX91088	Canola	cytosol, nucleus, vacuole	36.53	33.03
EES15315	Sorghum	cytosol	26.36	30.72
OQU89565	Sorghum	cytosol	26.79	30.06
EES13957	Sorghum	cytosol	26.65	29.43
OQU87774	Sorghum	cytosol	27.08	29.26
EES13134	Sorghum	cytosol	26.07	28.8
EES01976	Sorghum	cytosol	26.5	28.12
KXG33434	Sorghum	peroxisome	24.21	27.89
EES05115	Sorghum	cytosol	26.07	26.69
GSMUA_Achr10P...	Banana	cytosol	29.66	26.61
EES19684	Sorghum	cytosol	25.36	26.54
EES01688	Sorghum	cytosol	19.91	26.08
KXG26069	Sorghum	cytosol	25.93	25.86
KXG23006	Sorghum	cytosol	22.49	24.88

Protein Annotations

Gene3D:1.20.1280.170	MapMan:22.6.3.1	EntrezGene:8079861	UniProt:C5YSA9	InterPro:Cullin_repeat-like_dom_sf	EnsemblPlants:EES16704
ProteinID:EES16704	ProteinID:EES16704.1	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF81	EnsemblPlantsGene:SORBI_3008G048200	SUPFAM:SSF74788	UniParc:UPI0001A8862F
RefSeq:XP_002442866.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:4728273..4730726

Molecular Weight (calculated)

75477.7 Da

IEP (calculated)

6.097

GRAVY (calculated)

-0.408

Length

698 amino acids

Sequence
(BLAST)

001: MDSRSQAPYK SSSFSPATTR DDGGRTREVD RNFSLGALRD KRDHPPHGGS REQSIKEEDE QEEGDHGAPR GGGGGGGGGG GECPGSGGGG EPDLAALSAE
101: VDAFLAGQDA DSPVSVTEAT LERFASAVEL LVARSEGVED KWAAEAGGEP SALLAAITRI AALSSALGKS PEGGGKHAAA VNRVTAVLHR AMAFLEEEFH
201: GLLEDPRVPK TTGSELGGAH EPDRCVLAPP PPSESGPGKE SAPPYPAETV DRLRAMADAM VAAGYVTECS QMFLVARRNA FDATLQGLGY EKSNIDDVVK
301: MTWEALEAVI VTWTKAFRHA INVGLSTEHD LCTRVFAGRH AAVGRGIFAD LSRCVMLHML SFTDAVAMTK RAAEKLFKVL DMYEAVRDAS PVIEAFLSAD
401: EPATAEHSHS HSHHSGLAEL KSEIAAVRYR LGESAAAIFR ELESSIRADA GKQPVPGGAV HPLTRYVMNY LKYACEYNST LEQVFREHHS NGGNGGGDDG
501: GGNPFAAQLM EVMELLHSNL EAKSRLYKDP SLSNIFLMNN GRYMLQKIRG SSETNAMLGE AWARKQSTNL RQYHKNYQRE AWSRVLGLLR DDGVLTVKGH
601: VQKPVLKERF KQFNAAMDEI HRTQGAWVVS DEQLQSELRV SIAAVVVPAY RSFLGRFAQH FSAGRQTEKY VKLSAEDVET IIDELFDGNA TSMTRRRT

Best Arabidopsis Sequence Match ( AT5G13150.1 )
(BLAST)

001: MEKSGNHHHA NESSENHDHK SEDHENKQHS DELHSSTPES QSESSEHSLV EVMEAVVDFI QTLSSEKDPL GEISPAVESF PEAVDSLVSK MESSGLGRDE
101: TEDSVFIDAV NRISKSVMRL RELKLDSTPV SSWLNRASSV QHRAVSLLDE EFRHLLDRSR EEEKKNNNNN NHHDGSNSDH NNSSTNDSDR CVLQDHEEAE
201: EESFHDFSPE SISTLKKIAG AMISAGYEAE CCMSYEMSRR HAFKEELTEV GFEGINVEDV QRIGWESLEG EIASWISIVR RCSTVLFPGE LSLCNAVFPD
301: QDHSSVRKRL FTGLVSAVTI RFLDFSGAVV LTKRSSEKLF KFLDMYETLR DLIPAVEQSD SDLIQEIKLA QTRLGEAAVT IFGELEKSIK SDNGRTPVPS
401: GAVHPLTRYT MNYLKYACEY KETLDQVFQH YEANQTDNKP EPETKPRQQQ REDDEEYKVS AFARQMIRVM ELLDANLEIK SRLYRDPSLR FIFLMNNGRY
501: ILQKIKGSIE IRDLMGQSWT RKRSTELRQY HKSYQRETWG KVLQCMNQEG LQVNGKVSKP VLKERFKIFN AMFDEIHKTQ STWIVSDEQM QSELRVSISS
601: LVIPAYRSFF GRYKQHLDSG KQTDKYVKYQ PEDIESFIDD LFDGNPTSMA RKR

Arabidopsis Description

ATEXO70C1Exocyst subunit exo70 family protein C1 [Source:UniProtKB/TrEMBL;Acc:Q9FY95]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.