Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69666 | Canola | cytosol | 98.41 | 98.41 |
| CDY60968 | Canola | cytosol | 17.46 | 31.43 |
| CDY02822 | Canola | cytosol | 46.03 | 30.21 |
| CDY69943 | Canola | cytosol | 92.06 | 27.75 |
| CDX78509 | Canola | nucleus | 91.53 | 27.59 |
| CDY28574 | Canola | cytosol | 38.1 | 26.67 |
| AT5G13150.1 | Thale cress | nucleus | 90.48 | 26.19 |
| CDY02484 | Canola | cytosol | 41.27 | 25.83 |
| Os12t0165600-01 | Rice | cytosol, plasma membrane | 61.9 | 23.93 |
| CDY10372 | Canola | cytosol | 37.04 | 23.33 |
| Solyc05g024340.1.1 | Tomato | cytosol | 68.25 | 21.79 |
| PGSC0003DMT400006075 | Potato | cytosol | 68.25 | 21.79 |
| VIT_01s0146g00160.t01 | Wine grape | nucleus | 73.02 | 21.1 |
| KRH36360 | Soybean | cytosol | 66.14 | 20.66 |
| Solyc01g009880.2.1 | Tomato | nucleus | 67.2 | 19.13 |
| PGSC0003DMT400013431 | Potato | nucleus | 66.67 | 18.98 |
| TraesCS5B01G122500.1 | Wheat | plastid | 62.96 | 17.98 |
| CDX69615 | Canola | cytosol, nucleus, plastid | 65.08 | 17.96 |
| CDY09840 | Canola | cytosol, nucleus, plastid | 65.08 | 17.93 |
| CDX78551 | Canola | nucleus | 64.55 | 17.91 |
| CDX70532 | Canola | nucleus | 64.55 | 17.89 |
| Zm00001d041908_P001 | Maize | plastid | 62.43 | 17.43 |
| CDX85618 | Canola | nucleus | 64.02 | 17.34 |
| EES08037 | Sorghum | cytosol, plastid | 62.96 | 17.32 |
| Zm00001d023513_P001 | Maize | plastid | 62.43 | 17.28 |
| GSMUA_Achr6P07200_001 | Banana | nucleus | 60.32 | 17.25 |
| EES16704 | Sorghum | plastid | 63.49 | 17.19 |
| Zm00001d053192_P001 | Maize | cytosol, plastid | 61.9 | 17.13 |
| Zm00001d004846_P001 | Maize | cytosol, plastid | 61.9 | 17.11 |
| GSMUA_Achr6P25750_001 | Banana | endoplasmic reticulum | 62.96 | 16.98 |
| Os11t0167600-00 | Rice | plasma membrane | 61.9 | 16.91 |
| TraesCS5D01G130800.1 | Wheat | plastid | 62.96 | 16.53 |
| HORVU4Hr1G020050.1 | Barley | cytosol, plastid | 60.85 | 16.24 |
| TraesCS5A01G122400.1 | Wheat | mitochondrion | 62.96 | 16.1 |
| TraesCS4A01G208500.1 | Wheat | cytosol | 60.32 | 16.1 |
| TraesCS4B01G112100.1 | Wheat | cytosol | 60.32 | 16.06 |
| TraesCS4D01G109600.1 | Wheat | cytosol | 59.79 | 15.92 |
| KRG93132 | Soybean | cytosol | 37.04 | 14.89 |
| CDX68265 | Canola | cytosol | 46.03 | 14.29 |
| CDY50639 | Canola | cytosol | 45.5 | 14.12 |
| CDX91088 | Canola | cytosol, nucleus, vacuole | 57.67 | 14.12 |
| CDX97543 | Canola | cytoskeleton, cytosol, nucleus | 45.5 | 13.92 |
| CDY60022 | Canola | cytosol | 44.97 | 13.75 |
| CDY61474 | Canola | cytosol | 36.51 | 13.58 |
| CDY05812 | Canola | cytosol, plastid | 47.62 | 13.43 |
| CDY07003 | Canola | cytosol, golgi, mitochondrion, plastid | 28.04 | 13.38 |
| CDX71629 | Canola | cytosol | 47.09 | 13.32 |
| CDY52262 | Canola | cytoskeleton, cytosol, nucleus | 45.5 | 13.31 |
| CDY10240 | Canola | cytosol | 38.1 | 12.06 |
| CDY06667 | Canola | cytosol | 37.57 | 11.89 |
| CDY04082 | Canola | cytosol | 35.98 | 11.87 |
| CDY44387 | Canola | cytosol | 35.45 | 11.71 |
| CDY02176 | Canola | cytosol | 33.86 | 11.64 |
| CDX70300 | Canola | cytosol | 38.62 | 11.55 |
| CDY10374 | Canola | cytosol | 38.62 | 11.44 |
| CDY44373 | Canola | cytosol | 33.33 | 11.19 |
| CDX93621 | Canola | cytosol | 25.93 | 10.91 |
| CDY27076 | Canola | cytosol | 35.98 | 10.76 |
| CDX91635 | Canola | cytosol | 35.98 | 10.76 |
| CDX85273 | Canola | cytosol | 36.51 | 10.62 |
| CDX86365 | Canola | cytosol | 35.98 | 10.51 |
| HORVU5Hr1G039240.1 | Barley | plastid | 38.62 | 10.03 |
| CDX76117 | Canola | plastid | 30.69 | 9.16 |
| CDY02916 | Canola | plastid | 30.69 | 9.16 |
| CDY40204 | Canola | plastid | 30.16 | 9.13 |
| CDX71078 | Canola | cytosol, mitochondrion, nucleus, plastid | 26.45 | 9.01 |
| CDX93267 | Canola | plastid | 28.57 | 9.0 |
| CDX88720 | Canola | plastid | 25.93 | 8.91 |
| CDX73400 | Canola | plastid | 29.1 | 8.77 |
| CDY04577 | Canola | plastid | 24.34 | 8.47 |
| CDX95128 | Canola | cytosol, nucleus, plastid | 25.93 | 8.43 |
| CDY31722 | Canola | mitochondrion, plastid | 25.93 | 8.42 |
| CDY49576 | Canola | cytosol | 24.34 | 8.35 |
| CDX77195 | Canola | mitochondrion, plastid | 25.4 | 8.22 |
| CDX74848 | Canola | plastid | 26.45 | 8.2 |
| CDY44712 | Canola | cytosol | 26.45 | 8.14 |
| CDY41604 | Canola | cytosol | 26.45 | 8.08 |
| CDY68540 | Canola | plastid | 23.28 | 8.03 |
| CDY60562 | Canola | cytosol | 23.28 | 7.96 |
| CDX74849 | Canola | plastid | 26.45 | 7.95 |
| CDY64629 | Canola | plastid | 26.98 | 7.93 |
| CDY44645 | Canola | plastid | 26.98 | 7.92 |
| CDX74850 | Canola | plastid | 26.98 | 7.57 |
| CDY07931 | Canola | cytosol | 24.34 | 7.35 |
| CDX73983 | Canola | mitochondrion | 23.81 | 7.26 |
| CDX80235 | Canola | cytosol, nucleus, plastid | 23.81 | 7.19 |
| CDY64627 | Canola | plastid | 24.34 | 7.12 |
| CDY41297 | Canola | mitochondrion | 22.22 | 6.91 |
| CDY23090 | Canola | nucleus | 32.8 | 6.61 |
| CDY44646 | Canola | cytosol | 24.34 | 6.59 |
| GSMUA_Achr10P... | Banana | cytosol | 2.65 | 0.64 |
| GSMUA_Achr6P18090_001 | Banana | nucleus | 1.06 | 0.43 |
| CDY60967 | Canola | plastid | 0.53 | 0.26 |
| CDY70944 | Canola | cytosol | 0.0 | 0.0 |
| CDY02823 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX97230 | EnsemblPlantsGene:GSBRNA2T00104233001 | Gene3D:1.20.1280.170 | GO:A0A078E597 | GO:GO:0000145 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 |
| GO:GO:0009987 | InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF15 | PFAM:PF03081 |
| ProteinID:CDX97230 | ProteinID:CDX97230.1 | SUPFAM:SSF74788 | UniParc:UPI0004EE496F | MapMan:22.6.3.1 | : |
Description
BnaC09g43950D
Coordinates
chrLK031897:-:1294171..1294740
Molecular Weight (calculated)
22205.7 Da
IEP (calculated)
10.047
GRAVY (calculated)
-0.679
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MIRVMELLDA NLEVKSGLYR DPSLRSIFLM NNGRYILQKI KGSTEIRDLM GQAWTRKRST ELRQYHKSYQ RETWGKVLQC MNQEGLQVNG KISKTALKER
101: FKIFNNMFDE IHKTQSTWIV SDEQMQSELR VSIAALVIPA YRSFFGRYKQ HIDSGRHTDK YVKYQPEDIE SVIDDLFDGN PASMGRKRT
101: FKIFNNMFDE IHKTQSTWIV SDEQMQSELR VSIAALVIPA YRSFFGRYKQ HIDSGRHTDK YVKYQPEDIE SVIDDLFDGN PASMGRKRT
001: MATPETRGVD SDLETAEKII LRWDSTTSEE AKENLIFQSG GDREEVDRYL KAVDEVQRHI SSISISDEVK ATIQIAMARL EDELRNILIS QTSTFEPDSL
101: LLDSSLSSSS FASSSRTELE DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD LRSIAQRMIG AGYSRECVQV
201: YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK
301: LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC
401: RGLKCTNDRN DPDMDISELE GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD KYLRKLTGIF RQAATKYQRA
501: TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN
601: LETAVLDFFE GYTTAPHLRR SQ
101: LLDSSLSSSS FASSSRTELE DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD LRSIAQRMIG AGYSRECVQV
201: YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK
301: LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC
401: RGLKCTNDRN DPDMDISELE GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD KYLRKLTGIF RQAATKYQRA
501: TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN
601: LETAVLDFFE GYTTAPHLRR SQ
Arabidopsis Description
ATEXO70D2At1g54090 [Source:UniProtKB/TrEMBL;Acc:Q9SYG5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.