Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06667 | Canola | cytosol | 97.99 | 97.99 |
| AT1G07000.1 | Thale cress | cytosol | 87.27 | 86.98 |
| CDY70944 | Canola | cytosol | 38.53 | 54.25 |
| CDY02822 | Canola | cytosol | 25.29 | 52.43 |
| CDY60022 | Canola | cytosol | 53.43 | 51.62 |
| PGSC0003DMT400065456 | Potato | cytosol | 54.1 | 51.52 |
| Solyc08g066070.1.1 | Tomato | cytosol | 54.27 | 51.35 |
| CDY02823 | Canola | cytosol | 19.43 | 46.59 |
| GSMUA_Achr10P... | Banana | cytosol | 43.72 | 43.0 |
| Zm00001d038447_P001 | Maize | plastid | 39.2 | 40.28 |
| Os05t0473500-01 | Rice | plastid | 39.36 | 39.5 |
| OQU87774 | Sorghum | cytosol | 42.55 | 39.32 |
| TraesCS1B01G307200.1 | Wheat | cytosol | 42.71 | 39.05 |
| TraesCS1A01G297800.1 | Wheat | cytosol | 42.71 | 38.99 |
| TraesCS1D01G293400.1 | Wheat | cytosol | 42.38 | 38.69 |
| Os01t0827500-01 | Rice | plasma membrane | 41.88 | 38.34 |
| CDX97230 | Canola | cytosol | 12.06 | 38.1 |
| CDX69666 | Canola | cytosol | 12.06 | 38.1 |
| TraesCS3D01G341800.1 | Wheat | cytosol | 41.04 | 37.98 |
| TraesCS3A01G348200.1 | Wheat | cytosol | 41.04 | 37.81 |
| TraesCS3B01G380100.1 | Wheat | cytosol | 41.04 | 37.69 |
| EES19684 | Sorghum | cytosol | 42.04 | 37.63 |
| Zm00001d010602_P001 | Maize | extracellular, mitochondrion, plasma membrane | 41.54 | 37.46 |
| HORVU1Hr1G070390.1 | Barley | cytosol, mitochondrion | 42.38 | 36.56 |
| CDY02484 | Canola | cytosol | 18.26 | 36.09 |
| CDY28574 | Canola | cytosol | 16.25 | 35.93 |
| EES01688 | Sorghum | cytosol | 31.66 | 35.46 |
| HORVU3Hr1G088110.3 | Barley | cytosol, plastid | 41.04 | 35.3 |
| Os01t0827600-01 | Rice | cytosol | 30.82 | 33.27 |
| CDX68265 | Canola | cytosol | 31.16 | 30.54 |
| CDY50639 | Canola | cytosol | 31.16 | 30.54 |
| CDX78509 | Canola | nucleus | 30.99 | 29.51 |
| CDY69943 | Canola | cytosol | 30.99 | 29.51 |
| CDY05812 | Canola | cytosol, plastid | 31.49 | 28.06 |
| CDY44387 | Canola | cytosol | 26.8 | 27.97 |
| CDY04082 | Canola | cytosol | 26.63 | 27.75 |
| CDX71629 | Canola | cytosol | 30.99 | 27.69 |
| CDX97543 | Canola | cytoskeleton, cytosol, nucleus | 28.48 | 27.51 |
| CDY61474 | Canola | cytosol | 22.78 | 26.77 |
| CDY52262 | Canola | cytoskeleton, cytosol, nucleus | 28.64 | 26.47 |
| CDY02176 | Canola | cytosol | 24.29 | 26.36 |
| CDY10374 | Canola | cytosol | 28.14 | 26.33 |
| CDX70300 | Canola | cytosol | 27.81 | 26.27 |
| CDY07003 | Canola | cytosol, golgi, mitochondrion, plastid | 17.25 | 26.01 |
| CDY10372 | Canola | cytosol | 13.07 | 26.0 |
| CDX69615 | Canola | cytosol, nucleus, plastid | 29.65 | 25.84 |
| CDX93621 | Canola | cytosol | 19.43 | 25.84 |
| CDY60968 | Canola | cytosol | 4.52 | 25.71 |
| CDX78551 | Canola | nucleus | 29.31 | 25.7 |
| CDX70532 | Canola | nucleus | 28.98 | 25.37 |
| CDY09840 | Canola | cytosol, nucleus, plastid | 29.15 | 25.36 |
| CDX71078 | Canola | cytosol, mitochondrion, nucleus, plastid | 23.45 | 25.23 |
| CDY44373 | Canola | cytosol | 23.62 | 25.04 |
| CDX85273 | Canola | cytosol | 27.14 | 24.92 |
| CDX88720 | Canola | plastid | 22.95 | 24.91 |
| CDX86365 | Canola | cytosol | 26.97 | 24.88 |
| CDY68540 | Canola | plastid | 22.78 | 24.82 |
| CDY60562 | Canola | cytosol | 22.95 | 24.77 |
| CDX85618 | Canola | nucleus | 28.81 | 24.64 |
| CDX95128 | Canola | cytosol, nucleus, plastid | 23.62 | 24.27 |
| CDY04577 | Canola | plastid | 21.94 | 24.13 |
| CDY27076 | Canola | cytosol | 25.46 | 24.05 |
| CDX91635 | Canola | cytosol | 25.46 | 24.05 |
| CDX77195 | Canola | mitochondrion, plastid | 23.28 | 23.8 |
| CDY31722 | Canola | mitochondrion, plastid | 23.12 | 23.71 |
| CDY40204 | Canola | plastid | 24.62 | 23.56 |
| CDY60967 | Canola | plastid | 15.08 | 23.5 |
| CDX73400 | Canola | plastid | 24.62 | 23.45 |
| CDY49576 | Canola | cytosol | 21.61 | 23.41 |
| CDX76117 | Canola | plastid | 24.62 | 23.22 |
| CDX93267 | Canola | plastid | 22.78 | 22.67 |
| CDY02916 | Canola | plastid | 23.79 | 22.43 |
| CDY41604 | Canola | cytosol | 22.61 | 21.81 |
| CDX80235 | Canola | cytosol, nucleus, plastid | 22.78 | 21.73 |
| CDX74849 | Canola | plastid | 22.78 | 21.62 |
| CDY44645 | Canola | plastid | 23.28 | 21.58 |
| CDY64627 | Canola | plastid | 23.28 | 21.52 |
| CDX74848 | Canola | plastid | 21.94 | 21.48 |
| CDX73983 | Canola | mitochondrion | 22.28 | 21.45 |
| Zm00001d043015_P001 | Maize | mitochondrion | 38.69 | 21.43 |
| CDY44712 | Canola | cytosol | 21.94 | 21.34 |
| CDX91088 | Canola | cytosol, nucleus, vacuole | 27.47 | 21.24 |
| CDY07931 | Canola | cytosol | 22.11 | 21.09 |
| CDY64629 | Canola | plastid | 22.61 | 21.0 |
| CDY41297 | Canola | mitochondrion | 21.27 | 20.89 |
| CDX74850 | Canola | plastid | 23.12 | 20.47 |
| CDY44646 | Canola | cytosol | 22.61 | 19.34 |
| CDY23090 | Canola | nucleus | 25.13 | 15.99 |
Protein Annotations
| Gene3D:1.20.1280.170 | MapMan:22.6.3.1 | GO:A0A078F6V3 | UniProt:A0A078F6V3 | EnsemblPlants:CDY10240 | ProteinID:CDY10240 |
| ProteinID:CDY10240.1 | InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00032064001 | PFAM:PF03081 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF29 | SUPFAM:SSF74788 | UniParc:UPI0004EE56B0 |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g04830DBnaC05g04830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6V3]
Coordinates
chrLK032001:-:717688..720118
Molecular Weight (calculated)
67344.2 Da
IEP (calculated)
4.790
GRAVY (calculated)
-0.268
Length
597 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEAGDENLY AAARDIARAL GKDPSAAGDI LQILSGYGAT GNTSSNSRAS TASRGDANLN RSLNSLERQI SSYIVEDRPI WSDPVDSRSF LDSVDDLLAM
101: AVDLRSMAGD KSVAVCLSRA DELIQQVMFR LQEEFGYVMD RASESFDSDD EFSGEEDNDI GYDQVIVARP VTDYKIVIEP LQSSVIGDLN AIAVRMVAGG
201: FGKECSRVYS SRRREFLEES LSRLHLRGLS MEEVQDSPWQ DLEDEIDRWI KAVTMVFRVF FPSERLLCDR VFSDLPVSSV TDLSFMEVCR GTTTQLLNFA
301: DAIALGSRLP ERLFKVMDLY EAVEDLIPKM ETLFSNKYCS PLKHEAVAIQ KRLGEAVRGI FMELENLIRR DPPKTAFPGG GIHPITRYVM NYLRAACKSR
401: QSLEQILDHT GNDAGSETRP LSVQLIWVLE LLESNLEGKK RTYRDPPLCF LFMMNNGKYI LDKATDNELG SILGEDWIVK HAAKLRQYHS NFLRSSWNQV
501: VALLRTESPY SKLIENLKLF KARFDEVCLM QSQWVVTDEQ LREELRSSVA GIVSPAYSSF VGRLKASPEI NGRRGEPFIP YTVEDLELRI KGLFKER
101: AVDLRSMAGD KSVAVCLSRA DELIQQVMFR LQEEFGYVMD RASESFDSDD EFSGEEDNDI GYDQVIVARP VTDYKIVIEP LQSSVIGDLN AIAVRMVAGG
201: FGKECSRVYS SRRREFLEES LSRLHLRGLS MEEVQDSPWQ DLEDEIDRWI KAVTMVFRVF FPSERLLCDR VFSDLPVSSV TDLSFMEVCR GTTTQLLNFA
301: DAIALGSRLP ERLFKVMDLY EAVEDLIPKM ETLFSNKYCS PLKHEAVAIQ KRLGEAVRGI FMELENLIRR DPPKTAFPGG GIHPITRYVM NYLRAACKSR
401: QSLEQILDHT GNDAGSETRP LSVQLIWVLE LLESNLEGKK RTYRDPPLCF LFMMNNGKYI LDKATDNELG SILGEDWIVK HAAKLRQYHS NFLRSSWNQV
501: VALLRTESPY SKLIENLKLF KARFDEVCLM QSQWVVTDEQ LREELRSSVA GIVSPAYSSF VGRLKASPEI NGRRGEPFIP YTVEDLELRI KGLFKER
001: MAEAGDENLY AAARDIARAL GKDPSAAGDI LQILSGYGAS GNRGGDPRPT PSRGGSNVNF DRALTSLERQ ISSYIVEDRP IWSDPVDSRT FLDSVDELLA
101: IAGDLRSMAG DKSVAVCQSR ADELIQQVMF RLQEEFGFVM DRAPDSFDSD DEFPGEEDND TSDGVIVARP ITDYKIVIEA LQSSVIGDLN AIAVRMVAGG
201: FAKECSRVYS SRRREFLEES LSRLHLRGLS MEEVQESPWQ DLEDEIDRWI KAVTLIFHVF FPSERLLCDR VFSDLPVSSV TDLSFMEVCR GTTTQLLNFA
301: DAIALGSRLP ERLFKVVDLY EAMQDLIPKM ETLFSDRYCS PLRHEALAIH KRLGEAIRGI FMELENLIRR DPPKTAFPGG GIHPITRYVM NYLRAACKSR
401: QSLEQILDQT GNETGSDTRP LSVQIIWVLE LLESNLEGKK RTYRDPSLCF LFMMNNDKYI LDKAKDNELG LVLGEDWIVK HAAKLRQYHS NYRRSSWNQV
501: VGLLRTDGPY PKLVENLRLF KSQFDEVCKV QSQWVVSDGQ LREELRSSVA GIVSPAYSNF IRRLKESPEI NGRRGEPFIP YTVEDVEFII KRLFKESSS
101: IAGDLRSMAG DKSVAVCQSR ADELIQQVMF RLQEEFGFVM DRAPDSFDSD DEFPGEEDND TSDGVIVARP ITDYKIVIEA LQSSVIGDLN AIAVRMVAGG
201: FAKECSRVYS SRRREFLEES LSRLHLRGLS MEEVQESPWQ DLEDEIDRWI KAVTLIFHVF FPSERLLCDR VFSDLPVSSV TDLSFMEVCR GTTTQLLNFA
301: DAIALGSRLP ERLFKVVDLY EAMQDLIPKM ETLFSDRYCS PLRHEALAIH KRLGEAIRGI FMELENLIRR DPPKTAFPGG GIHPITRYVM NYLRAACKSR
401: QSLEQILDQT GNETGSDTRP LSVQIIWVLE LLESNLEGKK RTYRDPSLCF LFMMNNDKYI LDKAKDNELG LVLGEDWIVK HAAKLRQYHS NYRRSSWNQV
501: VGLLRTDGPY PKLVENLRLF KSQFDEVCKV QSQWVVSDGQ LREELRSSVA GIVSPAYSNF IRRLKESPEI NGRRGEPFIP YTVEDVEFII KRLFKESSS
Arabidopsis Description
ATEXO70B2EXO70B2 [Source:UniProtKB/TrEMBL;Acc:A0A178WCB5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.