Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G297800.1 | Wheat | cytosol | 99.08 | 99.08 |
| TraesCS1B01G307200.1 | Wheat | cytosol | 98.93 | 99.08 |
| HORVU1Hr1G070390.1 | Barley | cytosol, mitochondrion | 97.71 | 92.34 |
| Zm00001d038447_P001 | Maize | plastid | 79.05 | 88.98 |
| EES19684 | Sorghum | cytosol | 90.21 | 88.46 |
| Zm00001d010602_P001 | Maize | extracellular, mitochondrion, plasma membrane | 89.45 | 88.37 |
| Os05t0473500-01 | Rice | plastid | 80.12 | 88.07 |
| TraesCS3D01G341800.1 | Wheat | cytosol | 81.35 | 82.48 |
| GSMUA_Achr10P... | Banana | cytosol | 53.82 | 57.99 |
| CDY02822 | Canola | cytosol | 21.1 | 47.92 |
| VIT_06s0004g07440.t01 | Wine grape | cytosol | 45.26 | 47.21 |
| Bra020368.1-P | Field mustard | cytosol | 34.4 | 47.07 |
| CDY70944 | Canola | cytosol | 30.28 | 46.7 |
| KRH17115 | Soybean | cytosol | 45.57 | 46.27 |
| AT5G58430.1 | Thale cress | cytosol | 44.04 | 46.15 |
| PGSC0003DMT400065456 | Potato | cytosol | 44.19 | 46.09 |
| Solyc08g066070.1.1 | Tomato | cytosol | 43.88 | 45.48 |
| Bra006767.1-P | Field mustard | cytosol | 42.97 | 45.47 |
| KRH72760 | Soybean | cytosol | 44.5 | 45.47 |
| CDY60022 | Canola | cytosol | 42.81 | 45.31 |
| CDY02823 | Canola | cytosol | 16.97 | 44.58 |
| Bra015543.1-P | Field mustard | cytosol | 38.99 | 42.71 |
| AT1G07000.1 | Thale cress | cytosol | 38.99 | 42.57 |
| CDY06667 | Canola | cytosol | 38.84 | 42.55 |
| CDY10240 | Canola | cytosol | 38.69 | 42.38 |
| TraesCS7D01G260600.1 | Wheat | cytosol | 28.44 | 31.1 |
| TraesCS3D01G424900.1 | Wheat | cytosol | 31.35 | 30.87 |
| TraesCS5D01G218900.1 | Wheat | cytosol | 27.83 | 30.28 |
| TraesCS7D01G290600.1 | Wheat | cytosol | 29.05 | 29.55 |
| TraesCS7D01G133800.1 | Wheat | cytosol | 29.36 | 28.49 |
| TraesCS1D01G029000.1 | Wheat | cytosol | 23.09 | 28.12 |
| TraesCS2D01G280500.1 | Wheat | nucleus | 29.2 | 27.96 |
| TraesCS3D01G299200.1 | Wheat | peroxisome | 25.38 | 27.71 |
| TraesCS2D01G596000.1 | Wheat | cytosol, mitochondrion, nucleus | 26.3 | 27.0 |
| TraesCS4D01G109600.1 | Wheat | cytosol | 27.83 | 25.63 |
| TraesCS5D01G130800.1 | Wheat | plastid | 28.13 | 25.56 |
| TraesCS4D01G112900.1 | Wheat | cytosol, mitochondrion | 25.23 | 25.54 |
| TraesCS5D01G133200.1 | Wheat | cytosol | 24.31 | 24.65 |
| TraesCS2D01G596100.1 | Wheat | cytosol | 23.39 | 24.02 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G293400.1 | EnsemblPlantsGene:TraesCS1D01G293400 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 | InterPro:Cullin_repeat-like_dom_sf |
| InterPro:Exo70 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF30 | PFAM:PF03081 | SEG:seg | SUPFAM:SSF74788 |
| MapMan:22.6.3.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:392553248..392555596
Molecular Weight (calculated)
71153.5 Da
IEP (calculated)
4.599
GRAVY (calculated)
-0.137
Length
654 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEDGEEKLL ATVQHIVQTL GSSDTMTEDI LKVFSNYDGR LSLDKIYAAR GAVAAAAGGG GGGGGGGEHS MPASPPLPPP PAAAVPGSSA RPPVTSMERT
101: VRTLDRQISQ FVTMDRLIWA DSGDADAFLE AVDDLIGTVQ ELDAAGTNRV LLDRADELLS RCMARLEDEF RALIERPDDA APSAPGGFAS DGSDDEEFYG
201: GADGYGDEPI PIAKPVTDYD VVIDALSPGS IANVHQISRR MVDAGFGREC AEAYAAARRG FVDESVARLG VRPRTAEEVH ASPWEELEFD IARWIPAFNM
301: VFRILIPSER RLCDRVFDGL APFGDLAFIA AVRTQALQLI SFGDAISSSS RSPERLFRVV DMYEAVRDIL PDLDPVFSDP YSAALRAEVS AVCNTLGSSI
401: KGIFMELENL IRRDPARVAT PGGGIHPITR YVMNYLRAAC GSRQTLEEVM EGDLGAGGRA SAAVDPDRPT SSLAVHIAWI MDVLHKNLDT KSKIYRDPSL
501: ACIFLMNNGK YIIQKVNDSE LGVLLGDDWI KQLSTRVRRW SMDYQRSTWG KVTTVLQIGG SGVGALPAKA MLQKLRMFNT YFEEIYAVQS EWVIADDQLR
601: MDVRAAVEDS VMPAYAALIA RLKSAPETGR DLYIKYTPED VEAHIHHLFE GAAK
101: VRTLDRQISQ FVTMDRLIWA DSGDADAFLE AVDDLIGTVQ ELDAAGTNRV LLDRADELLS RCMARLEDEF RALIERPDDA APSAPGGFAS DGSDDEEFYG
201: GADGYGDEPI PIAKPVTDYD VVIDALSPGS IANVHQISRR MVDAGFGREC AEAYAAARRG FVDESVARLG VRPRTAEEVH ASPWEELEFD IARWIPAFNM
301: VFRILIPSER RLCDRVFDGL APFGDLAFIA AVRTQALQLI SFGDAISSSS RSPERLFRVV DMYEAVRDIL PDLDPVFSDP YSAALRAEVS AVCNTLGSSI
401: KGIFMELENL IRRDPARVAT PGGGIHPITR YVMNYLRAAC GSRQTLEEVM EGDLGAGGRA SAAVDPDRPT SSLAVHIAWI MDVLHKNLDT KSKIYRDPSL
501: ACIFLMNNGK YIIQKVNDSE LGVLLGDDWI KQLSTRVRRW SMDYQRSTWG KVTTVLQIGG SGVGALPAKA MLQKLRMFNT YFEEIYAVQS EWVIADDQLR
601: MDVRAAVEDS VMPAYAALIA RLKSAPETGR DLYIKYTPED VEAHIHHLFE GAAK
001: MAENGEEKLL AVARHIAKTL GHNESMADDI LQIFSNFDGR FSREKLAEGQ AGEDGSGVAT LERALNSIDG QISRFVAADQ PIWADPADSA AFLDTIDELV
101: AIIREWSPMA SEKPIGICLT RADDMMQQAM FRIEEEFRSL MERGAESFGL NPQGDAGAMN HRFDSEEEED DDRDFNNGDD IQIPVAQPLT DYDLIIDALP
201: SATINDLHEM AKRMLGAGFG KACSHVYSSC RREFLEESMS RLGLQKLSIE EVHKMPWQEL EDEIDRWIKA ANVALRILFP SERRLCDRVF FGFSSAADLS
301: FMEVCRGSTI QLLNFADAIA IGSRSPERLF KVLDVFETMR DLMPEFESVF SDQFCSVLRN EAVTIWKRLG EAIRGIFMEL ENLIRRDPAK AAVPGGGLHP
401: ITRYVMNYLR AACRSRQTLE QVFEESNGVP SKDSTLLTVQ MSWIMELLES NLEVKSKVYK DPALCYVFLM NNGRYIVQKV KDGDLGLLLG DDWIRKHNVK
501: VKQYHMNYQR SSWNKMLGLL KVDNTAAGMN GLGKTMKEKL KQFNIQFDEI CKVHSTWVVF DEQLKEELKI SLARLLVPAY GSFIGRFQNL GDIGKNADKY
601: IKYGVEDIEA RINELFKGTT TGRK
101: AIIREWSPMA SEKPIGICLT RADDMMQQAM FRIEEEFRSL MERGAESFGL NPQGDAGAMN HRFDSEEEED DDRDFNNGDD IQIPVAQPLT DYDLIIDALP
201: SATINDLHEM AKRMLGAGFG KACSHVYSSC RREFLEESMS RLGLQKLSIE EVHKMPWQEL EDEIDRWIKA ANVALRILFP SERRLCDRVF FGFSSAADLS
301: FMEVCRGSTI QLLNFADAIA IGSRSPERLF KVLDVFETMR DLMPEFESVF SDQFCSVLRN EAVTIWKRLG EAIRGIFMEL ENLIRRDPAK AAVPGGGLHP
401: ITRYVMNYLR AACRSRQTLE QVFEESNGVP SKDSTLLTVQ MSWIMELLES NLEVKSKVYK DPALCYVFLM NNGRYIVQKV KDGDLGLLLG DDWIRKHNVK
501: VKQYHMNYQR SSWNKMLGLL KVDNTAAGMN GLGKTMKEKL KQFNIQFDEI CKVHSTWVVF DEQLKEELKI SLARLLVPAY GSFIGRFQNL GDIGKNADKY
601: IKYGVEDIEA RINELFKGTT TGRK
Arabidopsis Description
EXO70B1Exocyst complex component EXO70B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGH9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.