Factsheet for GSMUA_Achr10P05970_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P11590_001
GSMUA_Achr2P09490_001
GSMUA_Achr3P31830_001
GSMUA_Achr4P15500_001
GSMUA_Achr6P26140_001
GSMUA_Achr7P24930_001
GSMUA_Achr7P24940_001
GSMUA_Achr9P05750_001
GSMUA_Achr9P05760_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07000.1	GSMUA_Achr1P11590_001	AT1G29640.1	21798944
AT1G07000.1	GSMUA_Achr2P09490_001	AT1G29640.1	21798944
AT1G07000.1	GSMUA_Achr3P31830_001	AT1G29640.1	21798944
AT1G07000.1	GSMUA_Achr4P15500_001	AT1G29640.1	21798944
AT1G07000.1	GSMUA_Achr6P26140_001	AT1G29640.1	21798944
AT1G07000.1	GSMUA_Achr7P24930_001	AT1G29640.1	21798944
AT1G07000.1	GSMUA_Achr7P24940_001	AT1G29640.1	21798944
AT1G07000.1	GSMUA_Achr9P05750_001	AT1G29640.1	21798944
AT1G07000.1	GSMUA_Achr9P05760_001	AT1G29640.1	21798944
AT1G07000.1	GSMUA_AchrUn_...	AT1G29640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87774	Sorghum	cytosol	58.32	54.8
TraesCS3D01G341800.1	Wheat	cytosol	57.5	54.11
TraesCS1B01G307200.1	Wheat	cytosol	58.15	54.06
TraesCS3B01G380100.1	Wheat	cytosol	57.83	54.0
TraesCS3A01G348200.1	Wheat	cytosol	57.5	53.86
TraesCS1D01G293400.1	Wheat	cytosol	57.99	53.82
TraesCS1A01G297800.1	Wheat	cytosol	57.99	53.82
Os05t0473500-01	Rice	plastid	52.72	53.78
Os01t0827500-01	Rice	plasma membrane	57.5	53.53
Zm00001d038447_P001	Maize	plastid	50.91	53.18
EES19684	Sorghum	cytosol	56.51	51.42
Zm00001d010602_P001	Maize	extracellular, mitochondrion, plasma membrane	56.01	51.36
HORVU1Hr1G070390.1	Barley	cytosol, mitochondrion	57.99	50.87
HORVU3Hr1G088110.3	Barley	cytosol, plastid	57.66	50.43
CDY02822	Canola	cytosol	23.56	49.65
PGSC0003DMT400065456	Potato	cytosol	49.92	48.33
KRH17115	Soybean	cytosol	51.07	48.14
CDY70944	Canola	cytosol	33.61	48.11
Bra006767.1-P	Field mustard	cytosol	48.6	47.73
Solyc08g066070.1.1	Tomato	cytosol	49.59	47.7
Bra020368.1-P	Field mustard	cytosol	37.56	47.7
VIT_06s0004g07440.t01	Wine grape	cytosol	49.26	47.69
KRH72760	Soybean	cytosol	49.75	47.19
CDY60022	Canola	cytosol	47.94	47.09
AT5G58430.1	Thale cress	cytosol	48.27	46.96
CDY02823	Canola	cytosol	18.12	44.18
EES01688	Sorghum	cytosol	38.55	43.9
CDY10240	Canola	cytosol	43.0	43.72
AT1G07000.1	Thale cress	cytosol	43.0	43.57
Bra015543.1-P	Field mustard	cytosol	42.67	43.38
CDY06667	Canola	cytosol	42.34	43.05
Os01t0827600-01	Rice	cytosol	37.4	41.05
GSMUA_Achr10P...	Banana	cytosol	31.14	32.25
GSMUA_Achr9P14390_001	Banana	cytosol	29.82	31.98
GSMUA_Achr10P...	Banana	cytosol	29.16	31.55
GSMUA_Achr6P20710_001	Banana	cytosol, plastid	33.11	30.73
GSMUA_Achr9P01500_001	Banana	cytosol	30.48	30.68
GSMUA_Achr10P...	Banana	cytosol	21.91	29.49
GSMUA_Achr10P...	Banana	cytosol	30.97	29.24
Zm00001d043015_P001	Maize	mitochondrion	51.89	29.22
GSMUA_Achr6P34400_001	Banana	mitochondrion	29.0	29.14
GSMUA_Achr6P07200_001	Banana	nucleus	31.47	28.9
GSMUA_AchrUn_...	Banana	cytosol	27.02	28.67
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	26.03	26.92
GSMUA_Achr6P25750_001	Banana	endoplasmic reticulum	30.64	26.53
GSMUA_Achr10P...	Banana	mitochondrion	26.85	26.5
GSMUA_Achr7P15340_001	Banana	mitochondrion	25.7	25.57
GSMUA_Achr7P00520_001	Banana	cytosol	24.88	24.92
GSMUA_Achr5P26180_001	Banana	cytosol	26.36	24.54
GSMUA_Achr2P20450_001	Banana	plastid	26.85	24.4
GSMUA_Achr4P23470_001	Banana	cytosol	23.89	24.29
GSMUA_Achr6P18090_001	Banana	nucleus	17.63	23.21
GSMUA_Achr10P...	Banana	cytosol	17.96	14.01

Protein Annotations

Gene3D:1.20.1280.170	MapMan:22.6.3.1	ncoils:Coil	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145
GO:GO:0002237	GO:GO:0002238	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005576	GO:GO:0005615	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0005886	GO:GO:0006810	GO:GO:0006887	GO:GO:0006950	GO:GO:0008150
GO:GO:0009414	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0042545	GO:GO:0043621	GO:GO:0070062	GO:GO:0090333	GO:GO:1900150
GO:GO:1900426	GO:GO:1902290	EnsemblPlantsGene:GSMUA_Achr10G05970_001	EnsemblPlants:GSMUA_Achr10P05970_001	EnsemblPlants:GSMUA_Achr10T05970_001	UniProt:M0RFS4
PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF30	SUPFAM:SSF74788	UniParc:UPI0002953978	SEG:seg

Description

Putative Exocyst complex component 7 [Source:GMGC_GENE;Acc:GSMUA_Achr10G05970_001]

Coordinates

chr10:-:16454759..16456821

Molecular Weight (calculated)

66897.3 Da

IEP (calculated)

5.799

GRAVY (calculated)

-0.102

Length

607 amino acids

Sequence
(BLAST)

001: MEESGEEKLI AAVRHIAKSL GRTDTMADDI LQVFSAFDGR FSLDKLASDR SVPRTIRTLD RQISRFVASE RLIWSDAADA TAFLEAVDDL LATIHDLDAP
101: PDKPLLDRAE DLLQRCILRL EEELRAILRR PVGCGPAVGT PPSDGSDSDA AEGSEDRVPV AAPVDDYNLV IDALPSGSVA DLHAIARRMV AAGFGRECAE
201: AYGVSRRGFV DASVARLGIR PRPAEEVQAS TWIELEDEIA RWVKAVNMAF LILVPSERRL CDRVFASLPP FADIAFAAAC RPAAAGLLSF AYVVAAGPRD
301: PVRLFRLIDM YEALRDLLPE LDHLLSEQCS AALRADVAAG RRALGAAIRG IFVELENLIQ RDPAKATVPG GGLHPITRYV MNYLQAACSS RRTLEEVMDE
401: GAAIPPDPHH PSSSPSLSLQ VAWLMDVLHS NLENKSKIYP EPPLSYIFLM NNGRYMTQKA RDSELGALLG EDWIRRQMAM VRRWGNAYQR ATWTKVVAVL
501: RMDVIGGAVA SASPAAGKAM RERLRVFNSY LEDIWKVQAG WVVADEQLRT ELKLAVGALV LPAYRNFVAR LRLAGEGGKQ AERYLKYTVE EVEARINQLY
601: DGGRRRC

Best Arabidopsis Sequence Match ( AT5G58430.1 )
(BLAST)

001: MAENGEEKLL AVARHIAKTL GHNESMADDI LQIFSNFDGR FSREKLAEGQ AGEDGSGVAT LERALNSIDG QISRFVAADQ PIWADPADSA AFLDTIDELV
101: AIIREWSPMA SEKPIGICLT RADDMMQQAM FRIEEEFRSL MERGAESFGL NPQGDAGAMN HRFDSEEEED DDRDFNNGDD IQIPVAQPLT DYDLIIDALP
201: SATINDLHEM AKRMLGAGFG KACSHVYSSC RREFLEESMS RLGLQKLSIE EVHKMPWQEL EDEIDRWIKA ANVALRILFP SERRLCDRVF FGFSSAADLS
301: FMEVCRGSTI QLLNFADAIA IGSRSPERLF KVLDVFETMR DLMPEFESVF SDQFCSVLRN EAVTIWKRLG EAIRGIFMEL ENLIRRDPAK AAVPGGGLHP
401: ITRYVMNYLR AACRSRQTLE QVFEESNGVP SKDSTLLTVQ MSWIMELLES NLEVKSKVYK DPALCYVFLM NNGRYIVQKV KDGDLGLLLG DDWIRKHNVK
501: VKQYHMNYQR SSWNKMLGLL KVDNTAAGMN GLGKTMKEKL KQFNIQFDEI CKVHSTWVVF DEQLKEELKI SLARLLVPAY GSFIGRFQNL GDIGKNADKY
601: IKYGVEDIEA RINELFKGTT TGRK

Arabidopsis Description

EXO70B1Exocyst complex component EXO70B1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGH9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.