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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 2
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr1P00560_001
GSMUA_Achr2P12040_001
GSMUA_Achr2P18250_001
GSMUA_Achr4P21690_001
GSMUA_Achr4P30100_001
GSMUA_Achr8P14860_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G29640.1 GSMUA_Achr11P... AT3G48150.1 21798944
AT1G29640.1 GSMUA_Achr1P00560_001 AT4G17680.1 21798944
AT1G29640.1 GSMUA_Achr2P12040_001 AT4G17680.1 21798944
AT1G29640.1 GSMUA_Achr2P18250_001 AT4G17680.1 21798944
AT1G29640.1 GSMUA_Achr4P21690_001 AT4G17680.1 21798944
AT1G29640.1 GSMUA_Achr4P30100_001 AT4G17680.1 21798944
AT1G29640.1 GSMUA_Achr8P14860_001 AT4G17680.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH13257 Soybean mitochondrion 28.32 65.31
GSMUA_Achr6P26140_001 Banana cytosol 52.21 57.84
GSMUA_Achr4P15500_001 Banana cytosol 49.56 48.28
GSMUA_Achr9P05760_001 Banana nucleus 50.44 45.97
GSMUA_Achr2P09490_001 Banana cytosol 46.9 44.17
GSMUA_Achr1P11590_001 Banana cytosol 44.25 43.48
GSMUA_Achr7P24940_001 Banana cytosol 46.02 42.98
GSMUA_Achr3P31830_001 Banana nucleus 44.25 42.37
CDY17236 Canola cytosol 45.13 40.16
Bra005436.1-P Field mustard cytosol 45.13 40.16
CDX84328 Canola cytosol 44.25 39.37
CDY68974 Canola nucleus 46.9 38.97
KRH71505 Soybean cytosol 33.63 38.38
Bra030154.1-P Field mustard nucleus 46.02 38.24
CDX94683 Canola cytosol 46.02 38.24
CDX94684 Canola cytosol 46.02 38.24
GSMUA_Achr7P24930_001 Banana plastid 33.63 38.0
CDY26321 Canola nucleus 46.02 37.68
KRH21137 Soybean cytosol 38.94 37.29
CDX99846 Canola cytosol 44.25 36.23
AT2G34340.1 Thale cress nucleus 43.36 36.03
AT1G29640.1 Thale cress cytosol 44.25 35.71
GSMUA_Achr9P05750_001 Banana cytosol 37.17 35.0
AT4G18980.1 Thale cress cytosol 32.74 34.91
CDY35299 Canola nucleus 40.71 33.58
CDX98601 Canola cytosol 31.86 33.03
Bra012560.1-P Field mustard cytosol 31.86 33.03
CDX90198 Canola cytosol 40.71 32.86
CDY01576 Canola nucleus 31.86 32.73
CDY09268 Canola nucleus 30.97 31.82
Bra020981.1-P Field mustard nucleus 30.97 31.82
CDX76503 Canola nucleus 30.97 31.82
CDY72186 Canola cytosol 39.82 31.69
CDY43682 Canola cytosol 39.82 31.69
CDX78911 Canola nucleus 28.32 30.48
CDY72609 Canola cytosol 30.09 29.82
Bra017599.1-P Field mustard cytosol 30.09 29.82
AT5G45630.1 Thale cress nucleus 30.09 29.82
CDX99403 Canola nucleus 29.2 29.73
Bra013366.1-P Field mustard nucleus 30.09 29.57
PGSC0003DMT400035019 Potato nucleus 36.28 29.29
PGSC0003DMT400035020 Potato nucleus 36.28 29.29
Bra010823.1-P Field mustard nucleus 35.4 29.2
Solyc03g005890.1.1 Tomato nucleus 33.63 27.54
KRH11111 Soybean nucleus 38.05 24.86
Bra032329.1-P Field mustard nucleus 42.48 23.3
Bra021903.1-P Field mustard nucleus 25.66 13.36
Protein Annotations
EnsemblPlants:GSMUA_AchrUn_randomP20060_001EnsemblPlants:GSMUA_AchrUn_randomT20060_001EnsemblPlantsGene:GSMUA_AchrUn_randomG20060_001InterPro:Senescence_reg_S40PANTHER:PTHR33083PANTHER:PTHR33083:SF7
PFAM:PF04520SEG:segUniParc:UPI00029497FDUniProt:M0UAR5MapMan:35.2:
Description
DUF584 domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG20060_001]
Coordinates
chrchrUn_random:+:97488322..97488895
Molecular Weight (calculated)
12991.1 Da
IEP (calculated)
4.632
GRAVY (calculated)
-1.031
Length
113 amino acids
Sequence
(BLAST)
001: MEELREADVL WPNNDDDDAE PRRKEIGAEK KPEDRESRSW KPVFVYDSSR ADDDDDDDDG RGGEMIPPHL IVASRMADKM AFSVCVGNGR TLKGRDLRRV
101: RNTILRLTGF LER
Best Arabidopsis Sequence Match ( AT1G29640.1 )
(BLAST)
001: MSEEFDESEI IFSDNYFPIR RREDGNEKEN NRPVDFRENS ERVWNKSSRR SKTTPLPSAV TAFSSSLPVN IPMRRYSTEE EYSDDDGGRK MIPPHLIVGR
101: RMEGGQMAFS VCTGNGRTLK GRDLSRVRNS VLKLTGFLEA
Arabidopsis Description
At1g29640 [Source:UniProtKB/TrEMBL;Acc:Q9C7N7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.