Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0130g00490.t01 | Wine grape | cytosol | 70.86 | 74.18 |
| EES07517 | Sorghum | cytosol | 72.02 | 72.5 |
| Os02t0656300-01 | Rice | cytosol | 71.36 | 72.19 |
| VIT_07s0031g02330.t01 | Wine grape | cytosol | 68.87 | 72.1 |
| TraesCS6A01G251400.1 | Wheat | cytosol | 71.36 | 71.95 |
| TraesCS6B01G273900.1 | Wheat | cytosol | 71.19 | 71.79 |
| TraesCS6D01G233200.1 | Wheat | cytosol | 71.03 | 71.62 |
| Zm00001d017475_P002 | Maize | cytosol | 70.86 | 71.45 |
| Solyc03g113740.2.1 | Tomato | cytosol, mitochondrion | 67.88 | 71.18 |
| PGSC0003DMT400063189 | Potato | cytosol | 63.91 | 70.96 |
| KRH27971 | Soybean | nucleus | 67.55 | 70.71 |
| KRH77487 | Soybean | nucleus | 67.38 | 70.42 |
| Bra033769.1-P | Field mustard | nucleus | 65.56 | 68.51 |
| AT3G48150.1 | Thale cress | cytosol | 65.23 | 68.05 |
| KRH24006 | Soybean | cytosol | 65.23 | 66.89 |
| Bra018081.1-P | Field mustard | cytosol | 63.91 | 66.67 |
| HORVU0Hr1G027080.4 | Barley | plastid | 65.56 | 66.0 |
| HORVU6Hr1G062870.1 | Barley | cytosol, plastid | 70.7 | 65.79 |
| CDY58070 | Canola | cytosol | 53.64 | 65.45 |
| CDY44976 | Canola | cytosol | 52.81 | 63.17 |
| CDY36901 | Canola | cytosol | 51.49 | 62.08 |
| CDY70805 | Canola | nucleus | 30.79 | 61.79 |
| CDY58069 | Canola | nucleus | 42.55 | 57.62 |
| Os06t0679100-00 | Rice | plastid | 16.23 | 55.06 |
| KRH29310 | Soybean | cytosol | 25.5 | 48.12 |
| GSMUA_Achr1P19740_001 | Banana | cytosol | 18.21 | 14.63 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:13.3.4.1.1.2.4 | InterPro:APC8 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005680 | GO:GO:0006950 |
| GO:GO:0007049 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0030071 | GO:GO:0031347 |
| EnsemblPlantsGene:GSMUA_Achr11G04650_001 | EnsemblPlants:GSMUA_Achr11P04650_001 | EnsemblPlants:GSMUA_Achr11T04650_001 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| UniProt:M0RPE5 | PFAM:PF04049 | PFAM:PF13181 | PFAM:PF13414 | PFscan:PS50005 | PFscan:PS50293 |
| PANTHER:PTHR12558 | PANTHER:PTHR12558:SF10 | SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf |
| InterPro:TPR_repeat | UniParc:UPI000295366B | SEG:seg | : | : | : |
Description
Anaphase-promoting complex subunit 8 [Source:GMGC_GENE;Acc:GSMUA_Achr11G04650_001]
Coordinates
chr11:-:3501952..3506800
Molecular Weight (calculated)
68782.5 Da
IEP (calculated)
6.963
GRAVY (calculated)
-0.390
Length
604 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSKESYRVE LRSAARQLSD RCLYSAAKWA AELLIDIEPD VHAPASSASS SAASARATPS TSSAARPLSH LHPDASAYRR RLRSAAASGD IAATPPAGVS
101: YISTPVPDDD GFNSDGGNDR YLLAKSYFDC REYRRAAHTL RGQTGKKTGF LRCYALYLAG EKRKEEEMIE LDGSLGKSDV VNSELISLER ELSSLRRIGS
201: IDSFDLYLYG LILKDKGCES LAVTVFVESV NSFPWNWSAW SELQSLCTNT DTLTKLNLKN HWMKDFFLAS TYQELKMHEE ALKRYECLLG VFRSSDYIQS
301: QIATALYSLR ELDEAEVIFE DLLRNDPYRV ESMDIYSNLL YAKECFSALS FLAHRVFLTD KYRPESCCII ANYYSLKGQH EKSVLYFRRA LKLNRKYLSA
401: WTLMGHEYVE MKNTPAAIDA YRRAIEINPR DYRAWYGLGQ TYEVMNMPFY ALYYFRKSSC LQPNDSRLWV AMAQCYESAP LQMLEEAIKC YTRAANSNDS
501: EGIALHQLAK LHGVLGHSEQ AAFFYKKDLE RMEAEGRQGP NMVEAMLYLA RYYKSEKKFE EAEFYCTRLL DYTGPERETA KSLLRGLRIA QTAFPSMDIG
601: HFGS
101: YISTPVPDDD GFNSDGGNDR YLLAKSYFDC REYRRAAHTL RGQTGKKTGF LRCYALYLAG EKRKEEEMIE LDGSLGKSDV VNSELISLER ELSSLRRIGS
201: IDSFDLYLYG LILKDKGCES LAVTVFVESV NSFPWNWSAW SELQSLCTNT DTLTKLNLKN HWMKDFFLAS TYQELKMHEE ALKRYECLLG VFRSSDYIQS
301: QIATALYSLR ELDEAEVIFE DLLRNDPYRV ESMDIYSNLL YAKECFSALS FLAHRVFLTD KYRPESCCII ANYYSLKGQH EKSVLYFRRA LKLNRKYLSA
401: WTLMGHEYVE MKNTPAAIDA YRRAIEINPR DYRAWYGLGQ TYEVMNMPFY ALYYFRKSSC LQPNDSRLWV AMAQCYESAP LQMLEEAIKC YTRAANSNDS
501: EGIALHQLAK LHGVLGHSEQ AAFFYKKDLE RMEAEGRQGP NMVEAMLYLA RYYKSEKKFE EAEFYCTRLL DYTGPERETA KSLLRGLRIA QTAFPSMDIG
601: HFGS
001: MVSKECCRNE IRAAIRQLSD RCLYSAAKWA GEQLVGIEQD PSNFTPANTR FQRGSSSIRR RFSTNESIST PLPSVGFSQA ATPLPEEDEA IDGDIYLLAK
101: SYFDCREYRR ASHMLRDQVS KKSLFLRYYA LYLAGEKRKE EEMIELEGPL GKSDAINREL VSLERDLSAL RRTGAIDSFG LYLYGVVLKE KGNESLARAS
201: LVESVNSYPW NWSAWSELQS LCTSIEILNS LNLNNHWMKE FFLGNAYQEL RMHTESLAKY EYLQGIFSFS NYIQAQTAKA QYSLREFDQV EIMFEELLRN
301: DPYRVEDMDL YSNVLYAKEA CAALSYLAHK VFLTDKYRPE SCCIIGNYYS LKGQHEKAVM YFRRALKLNK KYLSAWTLMG HEYVEMKNTP AAIDAYRRAV
401: DINPTDYRAW YGLGQAYEMM GMPFYALHYF RKSIFFLPND SRLWIAMAKC YQTEQLYMLE EAIKCYKRAV NCTDTEGIAL NQLAKLHQKL GRNEEAAYYF
501: EKDLERMDAE GLEGPNMFEA LVFLATHFKN HKKFEEAEVY CTRLLDYSGP EKEKAKSLLR GIRMAQTGFP SMDLEHFPI
101: SYFDCREYRR ASHMLRDQVS KKSLFLRYYA LYLAGEKRKE EEMIELEGPL GKSDAINREL VSLERDLSAL RRTGAIDSFG LYLYGVVLKE KGNESLARAS
201: LVESVNSYPW NWSAWSELQS LCTSIEILNS LNLNNHWMKE FFLGNAYQEL RMHTESLAKY EYLQGIFSFS NYIQAQTAKA QYSLREFDQV EIMFEELLRN
301: DPYRVEDMDL YSNVLYAKEA CAALSYLAHK VFLTDKYRPE SCCIIGNYYS LKGQHEKAVM YFRRALKLNK KYLSAWTLMG HEYVEMKNTP AAIDAYRRAV
401: DINPTDYRAW YGLGQAYEMM GMPFYALHYF RKSIFFLPND SRLWIAMAKC YQTEQLYMLE EAIKCYKRAV NCTDTEGIAL NQLAKLHQKL GRNEEAAYYF
501: EKDLERMDAE GLEGPNMFEA LVFLATHFKN HKKFEEAEVY CTRLLDYSGP EKEKAKSLLR GIRMAQTGFP SMDLEHFPI
Arabidopsis Description
APC8Anaphase-promoting complex subunit 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9STS3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.