Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0041g01190.t01 | Wine grape | endoplasmic reticulum | 15.34 | 63.04 |
| Bra003900.1-P | Field mustard | plastid | 55.03 | 41.77 |
| CDX68289 | Canola | plastid | 55.03 | 41.77 |
| CDY36666 | Canola | plastid | 55.03 | 41.77 |
| VIT_18s0041g01220.t01 | Wine grape | cytosol | 62.43 | 41.12 |
| KRH44932 | Soybean | plastid | 59.26 | 41.03 |
| KRH23754 | Soybean | plastid | 58.2 | 40.59 |
| AT1G72030.1 | Thale cress | plastid | 53.97 | 39.84 |
| Zm00001d019343_P001 | Maize | plastid | 59.79 | 38.83 |
| PGSC0003DMT400037096 | Potato | cytosol, plastid | 57.67 | 38.65 |
| Solyc03g025710.2.1 | Tomato | cytosol | 56.61 | 38.08 |
| Os07t0264800-01 | Rice | plastid | 58.73 | 37.76 |
| TraesCS5B01G123600.1 | Wheat | plastid | 58.2 | 37.41 |
| TraesCS5A01G124000.1 | Wheat | plastid | 57.14 | 37.37 |
| EER96202 | Sorghum | plastid | 58.2 | 37.04 |
| HORVU5Hr1G039960.1 | Barley | plastid | 57.14 | 36.73 |
| TraesCS5D01G131900.1 | Wheat | plastid | 57.14 | 36.24 |
| PGSC0003DMT400084957 | Potato | cytosol, plastid | 50.26 | 35.85 |
| PGSC0003DMT400018842 | Potato | plastid | 51.32 | 35.53 |
| Solyc11g020000.1.1 | Tomato | plastid | 32.8 | 29.52 |
| HORVU6Hr1G023720.1 | Barley | plastid | 19.05 | 20.34 |
| VIT_18s0041g01150.t01 | Wine grape | mitochondrion | 16.93 | 19.51 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P21890_001 | EnsemblPlants:GSMUA_Achr3T21890_001 | EnsemblPlantsGene:GSMUA_Achr3G21890_001 | Gene3D:3.40.630.30 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008080 | GO:GO:0016740 | InterPro:Acyl_CoA_acyltransferase | InterPro:GNAT_dom | InterPro:IPR000182 | PANTHER:PTHR42919 |
| PANTHER:PTHR42919:SF7 | PFAM:PF00583 | PFscan:PS51186 | SUPFAM:SSF55729 | UniParc:UPI000295E6C7 | UniProt:M0SGQ5 |
| MapMan:35.2 | : | : | : | : | : |
Description
acetyltransferase, GNAT family, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G21890_001]
Coordinates
chr3:-:22848654..22852800
Molecular Weight (calculated)
21501.1 Da
IEP (calculated)
8.079
GRAVY (calculated)
0.042
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKVGEEMSK VAHVQAEAFH TPVALLNDLF FHMFKAEVLS ALMYRVRSSP PERYACLVAE SASAHNSLWE PLKEIVGVVD VTVQRDEDVL CHIQGEQEYL
101: YISGIAVLTK FRRQKIATVL LKACDVLSAL WGFSYLALRA HEDDFGAQRL YSNAGYKVVS RDPIWITWIG KKQRVLMVKP SPFYKTDFM
101: YISGIAVLTK FRRQKIATVL LKACDVLSAL WGFSYLALRA HEDDFGAQRL YSNAGYKVVS RDPIWITWIG KKQRVLMVKP SPFYKTDFM
001: MGHLPQSLYS AAGPKFPYPG SSGLGVDQRK LTWSRFPVFL RCASTESLTS LTQNNAAEIE LKYLVSQHGW DVRRLNRDDE DEIRRVSLVQ AEAFHIPLAL
101: FDDFFFMFFQ AEVLSALLYK LKNSPPDRYA CLVAEQTSET ETLSSSSVVG VVDVTAQTES SVLRYFPGVE EYLYVSGLAV SKSQRRKKMA STLLKACDVL
201: CYLWGFKLLA LRAYEDDAAA RNLYSNAGYS VVETDPLWTS TWIGRKRRVL MSKRFS
101: FDDFFFMFFQ AEVLSALLYK LKNSPPDRYA CLVAEQTSET ETLSSSSVVG VVDVTAQTES SVLRYFPGVE EYLYVSGLAV SKSQRRKKMA STLLKACDVL
201: CYLWGFKLLA LRAYEDDAAA RNLYSNAGYS VVETDPLWTS TWIGRKRRVL MSKRFS
Arabidopsis Description
Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C7G6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.