Factsheet for Solyc11g020000.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g092930.1.1
Solyc04g077210.2.1
Solyc06g073150.2.1
Solyc08g078700.2.1
Solyc11g013370.1.1
Solyc11g017300.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G72030.1	Solyc06g073150.2.1	AT1G22920.1	21798944
AT1G72030.1	Solyc11g017300.1.1	AT1G22920.1	21798944
AT1G72030.1	Solyc02g092930.1.1	AT2G23290.1	21798944
AT1G72030.1	Solyc11g013370.1.1	AT2G44950.1	21798944
AT1G72030.1	Solyc04g077210.2.1	AT4G08150.1	21798944
AT1G72030.1	Solyc08g078700.2.1	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400084957	Potato	cytosol, plastid	83.33	66.04
VIT_18s0041g01190.t01	Wine grape	endoplasmic reticulum	9.52	43.48
Solyc03g025710.2.1	Tomato	cytosol	52.38	39.15
GSMUA_Achr3P21890_001	Banana	cytosol	29.52	32.8
VIT_18s0041g01220.t01	Wine grape	cytosol	38.57	28.22
Bra003900.1-P	Field mustard	plastid	32.38	27.31
CDX68289	Canola	plastid	32.38	27.31
CDY36666	Canola	plastid	31.9	26.91
KRH44932	Soybean	plastid	34.76	26.74
AT1G72030.1	Thale cress	plastid	31.43	25.78
KRH23754	Soybean	plastid	32.86	25.46
Zm00001d019343_P001	Maize	plastid	34.76	25.09
TraesCS5A01G124000.1	Wheat	plastid	33.81	24.57
TraesCS5B01G123600.1	Wheat	plastid	34.29	24.49
HORVU5Hr1G039960.1	Barley	plastid	34.29	24.49
EER96202	Sorghum	plastid	33.81	23.91
TraesCS5D01G131900.1	Wheat	plastid	33.81	23.83
Os07t0264800-01	Rice	plastid	33.33	23.81
VIT_18s0041g01150.t01	Wine grape	mitochondrion	17.14	21.95
HORVU6Hr1G023720.1	Barley	plastid	16.19	19.21

Protein Annotations

EnsemblPlants:Solyc11g020000.1.1	EnsemblPlantsGene:Solyc11g020000.1	Gene3D:3.40.630.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008080	GO:GO:0016740	InterPro:Acyl_CoA_acyltransferase
PANTHER:PTHR42919	PANTHER:PTHR42919:SF7	SEG:seg	SUPFAM:SSF55729	UniParc:UPI000276938B	UniProt:K4D6V3
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr11:-:9995259..9996303

Molecular Weight (calculated)

25067.1 Da

IEP (calculated)

9.614

GRAVY (calculated)

-0.614

Length

210 amino acids

Sequence
(BLAST)

001: MAQCQWQLNF QKEISWKCRV SINRATRICC FPKRLSIAEC CNRQSIPLPL TTTTRRRSRD KVKSQKSDEY ETNDLWKVRR VIESEEEMME VAAIQTDAFY
101: EHRLYSNDFF FQFFKVEQFS NLYYRLKHYA PDRRQKVATA LLKECDVLAS VWSIEYLVLK AYEDDFGARK LYTNAGYKLV SDDAPSKTKW IPERRRVLMV
201: KQVLHKSTTQ

Best Arabidopsis Sequence Match ( AT1G72030.1 )
(BLAST)

001: MGHLPQSLYS AAGPKFPYPG SSGLGVDQRK LTWSRFPVFL RCASTESLTS LTQNNAAEIE LKYLVSQHGW DVRRLNRDDE DEIRRVSLVQ AEAFHIPLAL
101: FDDFFFMFFQ AEVLSALLYK LKNSPPDRYA CLVAEQTSET ETLSSSSVVG VVDVTAQTES SVLRYFPGVE EYLYVSGLAV SKSQRRKKMA STLLKACDVL
201: CYLWGFKLLA LRAYEDDAAA RNLYSNAGYS VVETDPLWTS TWIGRKRRVL MSKRFS

Arabidopsis Description

Acyl-CoA N-acyltransferases (NAT) superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C7G6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.