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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc01g007840.2.1
Solyc01g060130.2.1
Solyc01g090290.2.1
Solyc01g091650.2.1
Solyc01g100350.2.1
Solyc01g100490.2.1
Solyc01g103220.2.1
Solyc01g104600.2.1
Solyc01g109660.2.1
Solyc01g111250.2.1
Solyc01g111260.2.1
Solyc02g068750.1.1
Solyc02g084920.2.1
Solyc02g093410.2.1
Solyc02g093920.2.1
Solyc03g005890.1.1
Solyc03g080190.2.1
Solyc03g093880.2.1
Solyc03g097200.2.1
Solyc03g112660.2.1
Solyc03g114070.2.1
Solyc03g116340.2.1
Solyc03g116760.2.1
Solyc03g119910.2.1
Solyc04g007150.2.1
Solyc04g007160.1.1
Solyc04g008490.1.1
Solyc04g051120.2.1
Solyc04g080160.2.1
Solyc05g008370.1.1
Solyc05g009470.2.1
Solyc05g024010.2.1
Solyc05g055890.2.1
Solyc06g060980.1.1
Solyc06g066820.2.1
Solyc06g068220.2.1
Solyc06g070910.2.1
Solyc06g073080.2.1
Solyc06g075170.1.1
Solyc06g082160.2.1
Solyc07g042170.2.1
Solyc07g063900.2.1
Solyc07g064150.2.1
Solyc08g007160.2.1
Solyc08g074980.2.1
Solyc08g077280.1.1
Solyc08g077770.2.1
Solyc08g083360.2.1
Solyc09g008850.2.1
Solyc09g075440.2.1
Solyc09g083290.2.1
Solyc09g090160.2.1
Solyc10g005660.2.1
Solyc10g006470.2.1
Solyc10g051380.1.1
Solyc10g051390.1.1
Solyc10g055240.1.1
Solyc11g005880.1.1
Solyc11g008880.1.1
Solyc11g040050.1.1
Solyc11g042420.1.1
Solyc11g069450.1.1
Solyc11g071240.1.1
Solyc12g009220.1.1
Solyc12g014410.1.1
Solyc12g042770.1.1
Solyc12g099660.1.1
Solyc12g100070.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G22920.1 Solyc01g090290.2.1 AT1G02090.1 11742986
AT1G22920.1 Solyc04g051120.2.1 AT1G08530.1 21798944
AT1G22920.1 Solyc03g119910.2.1 AT1G15550.1 21798944
AT1G22920.1 Solyc06g066820.2.1 AT1G15550.1 21798944
AT1G22920.1 Solyc07g042170.2.1 AT1G19180.1 21798944
AT1G22920.1 Solyc12g009220.1.1 AT1G19180.1 21798944
AT1G22920.1 Solyc01g103220.2.1 AT1G22840.1 21798944
AT1G22920.1 Solyc11g042420.1.1 AT1G22840.1 21798944
AT1G22920.1 Solyc03g005890.1.1 AT1G29640.1 21798944
AT1G22920.1 Solyc11g040050.1.1 AT1G50300.1 21798944
AT1G22920.1 Solyc06g068220.2.1 AT1G52510.1 21798944
AT1G22920.1 Solyc03g116760.2.1 AT1G52540.1 21798944
AT1G22920.1 Solyc08g074980.2.1 AT1G61590.1 21798944
AT1G22920.1 Solyc03g097200.2.1 AT1G65000.1 21798944
AT1G22920.1 Solyc04g007150.2.1 AT1G68560.1 21798944
AT1G22920.1 Solyc04g007160.1.1 AT1G68560.1 21798944
AT1G22920.1 Solyc05g009470.2.1 AT1G68560.1 21798944
AT1G22920.1 Solyc06g070910.2.1 AT1G74500.1 21798944
AT1G22920.1 Solyc05g008370.1.1 AT2G01290.1 21798944
AT1G22920.1 Solyc04g008490.1.1 AT2G02050.1 21798944
AT1G22920.1 Solyc01g109660.2.1 AT2G21660.1 21798944
AT1G22920.1 Solyc10g051380.1.1 AT2G21660.1 21798944
AT1G22920.1 Solyc10g051390.1.1 AT2G21660.1 21798944
AT1G22920.1 Solyc05g024010.2.1 AT2G33500.1 21798944
AT1G22920.1 Solyc12g100070.1.1 AT3G13440.1 21798944
AT1G22920.1 Solyc12g042770.1.1 AT3G15840.1 21798944
AT1G22920.1 Solyc08g083360.2.1 AT3G16250.1 21798944
AT1G22920.1 Solyc12g014410.1.1 AT3G20420.1 21798944
AT1G22920.1 Solyc09g083290.2.1 AT3G23050.1 21798944
AT1G22920.1 Solyc09g090160.2.1 AT3G23280.1 21798944
AT1G22920.1 Solyc02g093410.2.1 AT3G27560.1 21798944
AT1G22920.1 Solyc06g075170.1.1 AT3G45210.1 21798944
AT1G22920.1 Solyc11g069450.1.1 AT3G45210.1 21798944
AT1G22920.1 Solyc03g116340.2.1 AT3G47640.1 21798944
AT1G22920.1 Solyc02g084920.2.1 AT3G60820.1 21798944
AT1G22920.1 Solyc01g091650.2.1 AT3G61140.1 12615944
AT1G22920.1 Solyc01g091650.2.1 AT3G61140.1 9811788
AT1G22920.1 Solyc11g005880.1.1 AT3G62790.1 21798944
AT1G22920.1 Solyc05g055890.2.1 AT4G07950.1 21798944
AT1G22920.1 Solyc01g103220.2.1 AT4G10040.1 21798944
AT1G22920.1 Solyc11g042420.1.1 AT4G10040.1 21798944
AT1G22920.1 Solyc01g104600.2.1 AT4G14110.1 11701877
AT1G22920.1 Solyc01g104600.2.1 AT4G14110.1 11742986
AT1G22920.1 Solyc10g005660.2.1 AT4G26430.1 11742986
AT1G22920.1 Solyc11g008880.1.1 AT5G16490.1 21798944
AT1G22920.1 Solyc04g080160.2.1 AT5G42970.1 12615944
AT1G22920.1 Solyc06g060980.1.1 AT5G47100.1 21798944
AT1G22920.1 Solyc08g007160.2.1 AT5G47100.1 21798944
AT1G22920.1 Solyc08g077770.2.1 AT5G47100.1 21798944
AT1G22920.1 Solyc03g093880.2.1 AT5G51170.1 21798944
AT1G22920.1 Solyc10g005660.2.1 AT5G56280.1 11701877
AT1G22920.1 Solyc10g005660.2.1 AT5G56280.1 11742986
AT1G22920.1 Solyc10g005660.2.1 AT5G56280.1 12615944
AT1G22920.1 Solyc10g005660.2.1 AT5G56280.1 21798944
AT1G22920.1 Solyc12g099660.1.1 AT5G56360.1 21798944
AT1G22920.1 Solyc06g082160.2.1 AT5G58575.1 21798944
AT1G71230.1 Solyc01g090290.2.1 AT1G02090.1 11742986
AT1G71230.1 Solyc07g064150.2.1 AT1G54290.1 21798944
AT1G71230.1 Solyc10g006470.2.1 AT1G54290.1 21798944
AT1G71230.1 Solyc01g060130.2.1 AT1G56330.1 21798944
AT1G71230.1 Solyc01g100350.2.1 AT1G56330.1 21798944
AT1G71230.1 Solyc01g100490.2.1 AT1G56430.1 21798944
AT1G71230.1 Solyc09g075440.2.1 AT2G40940.1 21798944
AT1G71230.1 Solyc09g008850.2.1 AT3G10030.1 21798944
AT1G71230.1 Solyc01g007840.2.1 AT3G44260.1 21798944
AT1G71230.1 Solyc08g077280.1.1 AT3G59840.1 21798944
AT1G71230.1 Solyc01g104600.2.1 AT4G14110.1 11742986
AT1G71230.1 Solyc02g068750.1.1 AT4G22720.1 21798944
AT1G71230.1 Solyc03g112660.2.1 AT4G24680.1 21798944
AT1G71230.1 Solyc10g005660.2.1 AT4G26430.1 11742986
AT1G71230.1 Solyc01g111250.2.1 AT4G38690.1 21798944
AT1G71230.1 Solyc01g111260.2.1 AT4G38690.1 21798944
AT1G71230.1 Solyc10g055240.1.1 AT4G38690.1 21798944
AT1G71230.1 Solyc11g071240.1.1 AT5G11550.1 21798944
AT1G71230.1 Solyc02g093920.2.1 AT5G14250.1 11742986
AT1G71230.1 Solyc03g080190.2.1 AT5G24530.1 21798944
AT1G71230.1 Solyc06g073080.2.1 AT5G24530.1 21798944
AT1G71230.1 Solyc04g080160.2.1 AT5G42970.1 11742986
AT1G71230.1 Solyc07g063900.2.1 AT5G54580.1 21798944
AT1G71230.1 Solyc10g005660.2.1 AT5G56280.1 11742986
AT1G71230.1 Solyc03g114070.2.1 AT5G62880.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400069203 Potato cytosol 98.91 98.91
Solyc11g017300.1.1 Tomato cytosol 94.82 94.82
VIT_03s0038g04360.t01 Wine grape cytosol 86.92 88.61
AT1G22920.1 Thale cress cytosol 81.2 83.47
KRH61926 Soybean nucleus 84.74 83.16
GSMUA_Achr10P... Banana cytosol 82.83 82.61
Bra024548.1-P Field mustard cytosol 79.56 82.02
CDY04768 Canola cytosol 79.56 82.02
CDY21400 Canola cytosol 79.56 82.02
AT1G71230.1 Thale cress cytosol 79.84 81.84
HORVU3Hr1G054660.1 Barley cytosol 53.95 81.15
Os04t0654700-02 Rice cytosol 79.56 81.11
HORVU0Hr1G018470.1 Barley cytosol 53.41 80.66
CDY25761 Canola cytosol 78.2 80.62
Bra012351.1-P Field mustard cytosol 77.93 80.34
HORVU6Hr1G023630.1 Barley cytosol 52.04 79.58
Zm00001d002027_P002 Maize extracellular 78.47 79.56
HORVU7Hr1G078010.1 Barley cytosol 29.16 78.68
TraesCS2A01G504600.1 Wheat cytosol 77.66 78.3
TraesCS2D01G505300.1 Wheat golgi, unclear 77.11 77.75
KXG27287 Sorghum cytosol 78.47 77.21
HORVU1Hr1G008160.1 Barley cytosol 31.88 76.97
KRH52586 Soybean cytosol, nucleus 85.01 76.28
HORVU0Hr1G025410.1 Barley cytosol 61.04 74.42
HORVU4Hr1G048730.1 Barley cytosol 61.04 74.17
HORVU3Hr1G113750.1 Barley cytosol 30.25 71.61
HORVU2Hr1G056160.5 Barley cytosol 31.06 67.86
HORVU2Hr1G112000.1 Barley cytosol 69.21 63.82
HORVU2Hr1G067660.1 Barley cytosol, peroxisome 11.99 62.86
HORVU3Hr1G021300.1 Barley cytosol, plastid 24.8 55.15
HORVU4Hr1G047410.2 Barley cytosol, mitochondrion, peroxisome 25.07 36.36
Solyc04g079200.2.1 Tomato nucleus 24.52 28.85
Protein Annotations
EnsemblPlants:Solyc06g073150.2.1EnsemblPlantsGene:Solyc06g073150.2Gene3D:3.40.140.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR037518InterPro:JAMM/MPN+_domInterPro:MPNMEROPS:M67.002ncoils:CoilPANTHER:PTHR10410
PANTHER:PTHR10410:SF14PFAM:PF01398PFscan:PS50249SMART:SM00232SUPFAM:SSF102712UniParc:UPI0002765BCC
UniProt:K4C935MapMan:19.2.3.3.1.5::::
Description
No Description!
Coordinates
chr6:-:45064667..45069462
Molecular Weight (calculated)
40838.0 Da
IEP (calculated)
4.840
GRAVY (calculated)
-0.434
Length
367 amino acids
Sequence
(BLAST)
001: MDSLNSYASS AAMAQQTWEL ENNIVTIDAP SGSKPENSAS DAIFHYDDAA QTKFQREKPW ASDPHYFKRV KISALALLKM VVHARSGGTI EVMGLMQGKT
101: DGDAIIVMDA FALPVEGTET RVNAQADAYE YMVEYSQTNK QAGRLENVVG WYHSHPGYGC WLSGIDVSTQ MLNQQYQEPF LAVVIDPTRT VSAGKVEIGA
201: FRTYPEGYKP PDDPISEYQT IPLNKIEDFG VHCKQYYSLD ITYFKSSLDC RLLDLLWNKY WVNTLSSSPL LGNGDYVAGQ ISDLAEKLEH AENQLSNSRY
301: ASLMAPPQRK KEEESQLAKI TRDSAKITVE QVHGLMSQVI KDILFNSVGK SSKSQTESSG PEPMIES
Best Arabidopsis Sequence Match ( AT1G22920.1 )
(BLAST)
001: MEGSSSAIAR KTWELENNIL PVEPTDSASD SIFHYDDASQ AKIQQEKPWA SDPNYFKRVH ISALALLKMV VHARSGGTIE IMGLMQGKTE GDTIIVMDAF
101: ALPVEGTETR VNAQSDAYEY MVEYSQTSKL AGRLENVVGW YHSHPGYGCW LSGIDVSTQM LNQQYQEPFL AVVIDPTRTV SAGKVEIGAF RTYPEGHKIS
201: DDHVSEYQTI PLNKIEDFGV HCKQYYSLDI TYFKSSLDSH LLDLLWNKYW VNTLSSSPLL GNGDYVAGQI SDLAEKLEQA ESQLANSRYG GIAPAGHQRR
301: KEDEPQLAKI TRDSAKITVE QVHGLMSQVI KDILFNSARQ SKKSADDSSD PEPMITS
Arabidopsis Description
CSN5ACOP9 signalosome complex subunit 5a [Source:UniProtKB/Swiss-Prot;Acc:Q8LAZ7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.