Factsheet for Solyc01g060130.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

cytosol 3
endoplasmic reticulum 6
extracellular 4
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
MultiLoc:	extracellular
Plant-mPloc:	cytosol, endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g082060.1.1
Solyc03g121460.1.1
Solyc06g050570.1.1
Solyc06g073150.2.1
Solyc06g074170.2.1
Solyc07g017500.2.1
Solyc08g076530.2.1
Solyc09g011310.2.1
Solyc10g076360.1.1
Solyc10g084920.1.1
Solyc11g017300.1.1
Solyc11g068750.1.1
Solyc12g007130.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G09180.1	Solyc06g050570.1.1	AT2G40380.1	21798944
AT1G09180.1	Solyc02g082060.1.1	AT4G25660.1	21798944
AT1G09180.1	Solyc02g082060.1.1	AT4G25680.1	21798944
AT1G09180.1	Solyc10g076360.1.1	AT5G01640.1	21798944
AT1G09180.1	Solyc09g011310.2.1	AT5G02040.1	21798944
AT1G09180.1	Solyc10g084920.1.1	AT5G02040.1	21798944
AT1G56330.1	Solyc12g007130.1.1	AT2G20130.1	21798944
AT1G56330.1	Solyc03g121460.1.1	AT3G13710.1	21798944
AT1G56330.1	Solyc03g121460.1.1	AT3G13720.1	21798944
AT1G56330.1	Solyc07g017500.2.1	AT3G43230.1	21798944
AT1G56330.1	Solyc08g076530.2.1	AT4G17720.1	21798944
AT1G56330.1	Solyc10g076360.1.1	AT5G01640.1	21798944
AT1G56330.1	Solyc06g074170.2.1	AT5G22290.1	21798944
AT1G56330.1	Solyc11g068750.1.1	AT5G22290.1	21798944
AT4G02080.1	Solyc06g073150.2.1	AT1G22920.1	21798944
AT4G02080.1	Solyc11g017300.1.1	AT1G22920.1	21798944
AT4G02080.1	Solyc06g073150.2.1	AT1G71230.1	21798944
AT4G02080.1	Solyc11g017300.1.1	AT1G71230.1	21798944
AT4G02080.1	Solyc06g050570.1.1	AT2G40380.1	21798944
AT4G02080.1	Solyc03g121460.1.1	AT3G13720.1	21798944
AT4G02080.1	Solyc02g082060.1.1	AT4G25680.1	21798944
AT4G02080.1	Solyc10g076360.1.1	AT5G01640.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400068658	Potato	endoplasmic reticulum, extracellular	99.48	99.48
AT3G62560.1	Thale cress	endoplasmic reticulum	90.67	90.67
Solyc01g100350.2.1	Tomato	plastid	90.16	90.16
Solyc01g079540.2.1	Tomato	plastid	90.16	90.16
Solyc06g009660.2.1	Tomato	extracellular	89.12	89.12
HORVU3Hr1G035000.2	Barley	plasma membrane	88.6	88.6
TraesCS5A01G089200.1	Wheat	golgi	88.6	88.6
EES02699	Sorghum	endoplasmic reticulum, extracellular	88.6	88.6
TraesCS3B01G203800.1	Wheat	endoplasmic reticulum	88.6	88.6
Zm00001d040278_P001	Maize	extracellular	88.6	88.6
TraesCS3A01G172900.1	Wheat	golgi	88.6	88.6
CDX90955	Canola	endoplasmic reticulum, extracellular	88.08	88.08
TraesCS5D01G101300.1	Wheat	golgi	88.08	88.08
CDY22027	Canola	endoplasmic reticulum, extracellular	88.08	88.08
Bra000895.1-P	Field mustard	endoplasmic reticulum, extracellular	88.08	88.08
Os01t0254000-01	Rice	plasma membrane	88.08	88.08
AT4G02080.1	Thale cress	endoplasmic reticulum	88.08	88.08
KRH33832	Soybean	endoplasmic reticulum	88.08	88.08
KRG92955	Soybean	endoplasmic reticulum, extracellular	88.08	88.08
CDX91807	Canola	endoplasmic reticulum, extracellular	87.56	87.56
TraesCS5B01G095200.1	Wheat	endoplasmic reticulum, extracellular	87.56	87.56
EES00709	Sorghum	endoplasmic reticulum, extracellular	87.05	87.05
KRG96730	Soybean	endoplasmic reticulum	87.05	87.05
KRH68446	Soybean	endoplasmic reticulum	87.05	87.05
TraesCS3B01G221700.1	Wheat	endoplasmic reticulum, extracellular	87.05	87.05
Os12t0560300-01	Rice	plasma membrane	87.05	87.05
TraesCS3A01G193800.1	Wheat	golgi	87.05	87.05
Zm00001d040752_P001	Maize	endoplasmic reticulum, extracellular	87.05	87.05
CDY65544	Canola	endoplasmic reticulum, extracellular	86.01	86.91
TraesCS3D01G196200.1	Wheat	endoplasmic reticulum, extracellular	86.53	86.53
KXG23692	Sorghum	endoplasmic reticulum, extracellular	86.53	86.53
Os01t0338000-01	Rice	plasma membrane	86.01	86.01
AT1G56330.1	Thale cress	endoplasmic reticulum	86.01	86.01
CDY41713	Canola	endoplasmic reticulum, extracellular	86.53	85.64
CDY59269	Canola	endoplasmic reticulum, extracellular	86.53	85.64
Bra027937.1-P	Field mustard	endoplasmic reticulum, extracellular	86.53	85.64
CDY32159	Canola	endoplasmic reticulum, golgi	85.49	85.49
CDY31105	Canola	endoplasmic reticulum, golgi	85.49	85.49
CDX95000	Canola	endoplasmic reticulum, golgi	85.49	85.49
CDX93520	Canola	endoplasmic reticulum, golgi	85.49	85.49
Bra018576.1-P	Field mustard	endoplasmic reticulum, golgi	85.49	85.49
CDY39001	Canola	endoplasmic reticulum, extracellular	86.01	85.13
Bra038169.1-P	Field mustard	endoplasmic reticulum, extracellular	86.01	85.13
TraesCS3D01G179300.1	Wheat	endoplasmic reticulum, extracellular	88.6	85.07
AT1G09180.1	Thale cress	extracellular	83.94	83.94
VIT_16s0013g00170.t01	Wine grape	cytosol	44.56	79.63
EES15193	Sorghum	endoplasmic reticulum	79.27	78.46
Os06t0225000-00	Rice	endoplasmic reticulum	78.76	78.35
KXG28257	Sorghum	endoplasmic reticulum	78.76	78.35
TraesCS7B01G236300.1	Wheat	cytosol	78.24	78.24
Zm00001d049068_P001	Maize	cytosol	78.24	77.84
TraesCS7D01G332100.1	Wheat	endoplasmic reticulum	77.72	77.72
HORVU7Hr1G080190.1	Barley	endoplasmic reticulum	77.2	77.2
AT1G02620.1	Thale cress	endoplasmic reticulum	46.63	73.77
VIT_14s0060g01340.t01	Wine grape	endoplasmic reticulum, extracellular	79.27	64.56
HORVU3Hr1G045150.3	Barley	plastid	71.5	61.88
Zm00001d009211_P001	Maize	mitochondrion	87.05	51.38
Bra036294.1-P	Field mustard	endoplasmic reticulum	87.56	41.42
CDY07095	Canola	endoplasmic reticulum	87.56	41.32
Solyc11g011040.1.1	Tomato	plasma membrane	32.12	33.7
Solyc02g064640.2.1	Tomato	extracellular	30.57	32.07
Solyc03g043960.2.1	Tomato	plastid	30.57	32.07
Solyc02g092330.2.1	Tomato	plastid	30.05	31.52
GSMUA_Achr11P...	Banana	mitochondrion, plastid	34.72	27.57

Protein Annotations

MapMan:22.4.2.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016192	InterPro:IPR006687
EMBL:L12051	InterPro:P-loop_NTPase	UniProt:P52884	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51422
PANTHER:PTHR11711	PANTHER:PTHR11711:SF203	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF/SAR	InterPro:Small_GTPase_SAR1	EnsemblPlantsGene:Solyc01g060130.2	EnsemblPlants:Solyc01g060130.2.1	TIGRFAMs:TIGR00231	UniParc:UPI0000135564

Description

SAR2GTP-binding protein SAR2 [Source:UniProtKB/Swiss-Prot;Acc:P52884]

Coordinates

chr1:+:69592187..69594251

Molecular Weight (calculated)

21924.5 Da

IEP (calculated)

6.959

GRAVY (calculated)

-0.162

Length

193 amino acids

Sequence
(BLAST)

001: MFLVDWFYGV LASLGLWQKD AKILFLGLDN AGKTTLLHML KDERLVQHQP TQYPTSEELS IGNIKFKAFD LGGHQIARRV WRDYYAKVDA VVYLVDANDR
101: ERFPEAKKEL DGLLSDESLT NVPFLILGNK IDIPYAASED ELRYHLGLTG VTTGKGNINL AGTNVRPIEV FMCSIVRKMG YGEGFKWMSQ YIK

Best Arabidopsis Sequence Match ( AT3G62560.1 )
(BLAST)

001: MFLVDWFYGV LATLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLA NVPFLILGNK IDIPYAASED ELRYHLGLTS FTTGKGKVNL AGTNVRPLEV FMCSIVRKMG YGEGFKWVSQ YID

Arabidopsis Description

Putative Sar1 GTP binding protein [Source:UniProtKB/TrEMBL;Acc:Q8VYP7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.