Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G035000.2 | Barley | plasma membrane | 96.02 | 100.0 |
| TraesCS3A01G172900.1 | Wheat | golgi | 96.02 | 100.0 |
| TraesCS3B01G203800.1 | Wheat | endoplasmic reticulum | 96.02 | 100.0 |
| Zm00001d040278_P001 | Maize | extracellular | 91.04 | 94.82 |
| EES02699 | Sorghum | endoplasmic reticulum, extracellular | 91.04 | 94.82 |
| Os01t0254000-01 | Rice | plasma membrane | 91.04 | 94.82 |
| TraesCS5D01G101300.1 | Wheat | golgi | 90.05 | 93.78 |
| TraesCS3D01G196200.1 | Wheat | endoplasmic reticulum, extracellular | 88.06 | 91.71 |
| Bra000895.1-P | Field mustard | endoplasmic reticulum, extracellular | 88.06 | 91.71 |
| AT4G02080.1 | Thale cress | endoplasmic reticulum | 88.06 | 91.71 |
| CDX90955 | Canola | endoplasmic reticulum, extracellular | 88.06 | 91.71 |
| VIT_07s0005g01330.t01 | Wine grape | endoplasmic reticulum, extracellular | 88.06 | 91.71 |
| KRH68446 | Soybean | endoplasmic reticulum | 88.06 | 91.71 |
| CDY22027 | Canola | endoplasmic reticulum, extracellular | 88.06 | 91.71 |
| VIT_05s0077g01230.t01 | Wine grape | endoplasmic reticulum, extracellular | 87.56 | 91.19 |
| CDX91807 | Canola | endoplasmic reticulum, extracellular | 87.56 | 91.19 |
| KRH33832 | Soybean | endoplasmic reticulum | 87.06 | 90.67 |
| KRG96730 | Soybean | endoplasmic reticulum | 87.06 | 90.67 |
| KRG92955 | Soybean | endoplasmic reticulum, extracellular | 87.06 | 90.67 |
| PGSC0003DMT400023327 | Potato | endoplasmic reticulum, extracellular | 86.57 | 90.16 |
| Solyc01g079540.2.1 | Tomato | plastid | 86.57 | 90.16 |
| KRH37008 | Soybean | endoplasmic reticulum | 86.57 | 90.16 |
| KRH11980 | Soybean | endoplasmic reticulum, extracellular | 86.57 | 90.16 |
| AT3G62560.1 | Thale cress | endoplasmic reticulum | 86.57 | 90.16 |
| KRH02328 | Soybean | endoplasmic reticulum | 86.07 | 89.64 |
| Solyc01g100350.2.1 | Tomato | plastid | 86.07 | 89.64 |
| KRH50759 | Soybean | endoplasmic reticulum | 86.07 | 89.64 |
| KRH50760 | Soybean | endoplasmic reticulum | 86.07 | 89.64 |
| PGSC0003DMT400007183 | Potato | endoplasmic reticulum, golgi | 86.07 | 89.64 |
| PGSC0003DMT400068658 | Potato | endoplasmic reticulum, extracellular | 85.57 | 89.12 |
| KRH02329 | Soybean | endoplasmic reticulum, extracellular | 85.57 | 89.12 |
| PGSC0003DMT400018800 | Potato | cytosol | 85.57 | 89.12 |
| Solyc06g009660.2.1 | Tomato | extracellular | 85.57 | 89.12 |
| Solyc01g060130.2.1 | Tomato | endoplasmic reticulum, extracellular | 85.07 | 88.6 |
| AT1G56330.1 | Thale cress | endoplasmic reticulum | 85.07 | 88.6 |
| CDY65544 | Canola | endoplasmic reticulum, extracellular | 83.08 | 87.43 |
| Bra027937.1-P | Field mustard | endoplasmic reticulum, extracellular | 84.58 | 87.18 |
| CDY41713 | Canola | endoplasmic reticulum, extracellular | 84.58 | 87.18 |
| CDY59269 | Canola | endoplasmic reticulum, extracellular | 84.58 | 87.18 |
| Bra018576.1-P | Field mustard | endoplasmic reticulum, golgi | 83.58 | 87.05 |
| CDX93520 | Canola | endoplasmic reticulum, golgi | 83.58 | 87.05 |
| CDX95000 | Canola | endoplasmic reticulum, golgi | 83.58 | 87.05 |
| CDY31105 | Canola | endoplasmic reticulum, golgi | 83.58 | 87.05 |
| Bra038169.1-P | Field mustard | endoplasmic reticulum, extracellular | 84.08 | 86.67 |
| CDY39001 | Canola | endoplasmic reticulum, extracellular | 84.08 | 86.67 |
| CDY32159 | Canola | endoplasmic reticulum, golgi | 83.08 | 86.53 |
| AT1G09180.1 | Thale cress | extracellular | 82.59 | 86.01 |
| VIT_16s0013g00170.t01 | Wine grape | cytosol | 45.27 | 84.26 |
| TraesCS7D01G332100.1 | Wheat | endoplasmic reticulum | 76.12 | 79.27 |
| AT1G02620.1 | Thale cress | endoplasmic reticulum | 47.26 | 77.87 |
| VIT_05s0165g00230.t01 | Wine grape | cytosol | 61.69 | 72.94 |
| VIT_14s0060g01340.t01 | Wine grape | endoplasmic reticulum, extracellular | 77.61 | 65.82 |
| VIT_02s0033g01130.t01 | Wine grape | cytosol | 40.3 | 45.51 |
| Bra036294.1-P | Field mustard | endoplasmic reticulum | 87.56 | 43.14 |
| CDY07095 | Canola | endoplasmic reticulum | 87.56 | 43.03 |
| TraesCS4D01G260100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.85 | 33.7 |
| TraesCS6D01G274800.1 | Wheat | cytosol | 29.85 | 32.61 |
Protein Annotations
| MapMan:22.4.2.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| InterPro:IPR006687 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 | PFscan:PS51422 | PANTHER:PTHR11711 |
| PANTHER:PTHR11711:SF203 | SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF/SAR |
| InterPro:Small_GTPase_SAR1 | TIGRFAMs:TIGR00231 | EnsemblPlantsGene:TraesCS3D01G179300 | EnsemblPlants:TraesCS3D01G179300.1 | TIGR:cd00879 | SEG:seg |
Description
No Description!
Coordinates
chr3D:-:160908402..160913233
Molecular Weight (calculated)
22858.7 Da
IEP (calculated)
6.801
GRAVY (calculated)
-0.078
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLVDWFYGV LASLGLWQKE AKILFLGLDN AGKTTLLHML KDEVSLLLFR SRLVQHQPTQ YPTSEELSIG QIKFKTFDLG GHQIARRVWK DYYAKVDAVV
101: YLVDAADKER FAESKKELDG LLSDDSLANV PFLVLGNKID IPIAASEEEL RYYLGLSNFT TGKGNVNLSD SNVRPLEVFM CSIVRKMGYG EGFKWMSQYI
201: K
101: YLVDAADKER FAESKKELDG LLSDDSLANV PFLVLGNKID IPIAASEEEL RYYLGLSNFT TGKGNVNLSD SNVRPLEVFM CSIVRKMGYG EGFKWMSQYI
201: K
001: MGPLTRVLIL VEWFSQVDAL VYLVDAYDQE RFAESKKELD ALLSDESLAT VPFLILGNKI DIPYAASEDE LRFHLGLSNF TTGKGKVNLT DSNVRPLEVF
101: MCSIVRKMGY GEGFKWLSQY IK
101: MCSIVRKMGY GEGFKWLSQY IK
Arabidopsis Description
Ras-related small GTP-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q3E6Q3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.