CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 3
endoplasmic reticulum 6
extracellular 4
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
MultiLoc:	extracellular
Plant-mPloc:	cytosol, endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11980	Soybean	endoplasmic reticulum, extracellular	99.48	99.48
KRH50759	Soybean	endoplasmic reticulum	96.89	96.89
KRH02329	Soybean	endoplasmic reticulum, extracellular	96.37	96.37
KRH50760	Soybean	endoplasmic reticulum	93.78	93.78
KRH02328	Soybean	endoplasmic reticulum	93.26	93.26
KRH68446	Soybean	endoplasmic reticulum	92.75	92.75
EES00709	Sorghum	endoplasmic reticulum, extracellular	92.23	92.23
KRG96730	Soybean	endoplasmic reticulum	92.23	92.23
Zm00001d040752_P001	Maize	endoplasmic reticulum, extracellular	92.23	92.23
TraesCS3B01G221700.1	Wheat	endoplasmic reticulum, extracellular	91.71	91.71
TraesCS3A01G193800.1	Wheat	golgi	91.71	91.71
KRG92955	Soybean	endoplasmic reticulum, extracellular	91.19	91.19
TraesCS5A01G089200.1	Wheat	golgi	91.19	91.19
TraesCS3D01G196200.1	Wheat	endoplasmic reticulum, extracellular	91.19	91.19
KRH33832	Soybean	endoplasmic reticulum	91.19	91.19
TraesCS5D01G101300.1	Wheat	golgi	90.67	90.67
Os01t0338000-01	Rice	plasma membrane	90.67	90.67
TraesCS5B01G095200.1	Wheat	endoplasmic reticulum, extracellular	90.16	90.16
HORVU3Hr1G035000.2	Barley	plasma membrane	90.16	90.16
TraesCS3B01G203800.1	Wheat	endoplasmic reticulum	90.16	90.16
TraesCS3A01G172900.1	Wheat	golgi	90.16	90.16
Zm00001d040278_P001	Maize	extracellular	89.64	89.64
EES02699	Sorghum	endoplasmic reticulum, extracellular	89.64	89.64
Os01t0254000-01	Rice	plasma membrane	89.64	89.64
KXG23692	Sorghum	endoplasmic reticulum, extracellular	89.64	89.64
Os12t0560300-01	Rice	plasma membrane	89.12	89.12
TraesCS3D01G179300.1	Wheat	endoplasmic reticulum, extracellular	90.16	86.57
TraesCS7B01G236300.1	Wheat	cytosol	78.76	78.76
TraesCS7D01G332100.1	Wheat	endoplasmic reticulum	77.72	77.72
HORVU7Hr1G080190.1	Barley	endoplasmic reticulum	77.72	77.72
EES15193	Sorghum	endoplasmic reticulum	78.24	77.44
KXG28257	Sorghum	endoplasmic reticulum	77.72	77.32
Zm00001d049068_P001	Maize	cytosol	76.68	76.29
Os06t0225000-00	Rice	endoplasmic reticulum	76.68	76.29
HORVU3Hr1G045150.3	Barley	plastid	75.65	65.47
Zm00001d009211_P001	Maize	mitochondrion	92.23	54.43
KRG91118	Soybean	extracellular	21.76	33.33
KRH58117	Soybean	endoplasmic reticulum	31.61	33.15
KRH17349	Soybean	cytosol	31.09	32.61
KRH28350	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.09	32.61
KRH72981	Soybean	cytosol	31.09	32.61
KRH77133	Soybean	endoplasmic reticulum	31.09	32.61

Protein Annotations

MapMan:22.4.2.1	Gene3D:3.40.50.300	EMBL:ACUP02005407	EnsemblPlantsGene:GLYMA_09G038200	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005794	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031
GO:GO:0016192	UniProt:I1L0T1	InterPro:IPR006687	EnsemblPlants:KRH37008	ProteinID:KRH37008	ProteinID:KRH37008.1
InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51422	PANTHER:PTHR11711	PANTHER:PTHR11711:SF165
SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF/SAR	InterPro:Small_GTPase_SAR1
TIGRFAMs:TIGR00231	UniParc:UPI0001BA842A	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:3192941..3195384

Molecular Weight (calculated)

22100.7 Da

IEP (calculated)

7.073

GRAVY (calculated)

-0.164

Length

193 amino acids

Sequence
(BLAST)

001: MFLFDWFYGI LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQVARRV WKDYYAKVDA VVYLVDAFDK
101: ERFAESKKEL DALLSDESLA NVPFLVLGNK IDIPYAASED ELRYHLGLTN FTTGKGKINL TDSNLRPLEV FMCSIVRKMG YGEGFQWLSQ YIK

Best Arabidopsis Sequence Match ( AT4G02080.1 )
(BLAST)

001: MFMIDWFYGV LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLA SVPFLILGNK IDIPYAASED ELRYHLGLSN FTTGKGKVNL TDSNVRPLEV FMCSIVRKMG YGEGFKWVSQ YIK

Arabidopsis Description

SAR1ASAR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V5S8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.