Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G332100.1 | Wheat | endoplasmic reticulum | 96.37 | 96.37 |
| HORVU7Hr1G080190.1 | Barley | endoplasmic reticulum | 91.19 | 91.19 |
| TraesCS3B01G203800.1 | Wheat | endoplasmic reticulum | 79.79 | 79.79 |
| VIT_07s0005g01330.t01 | Wine grape | endoplasmic reticulum, extracellular | 79.27 | 79.27 |
| KRH50759 | Soybean | endoplasmic reticulum | 79.27 | 79.27 |
| TraesCS3B01G221700.1 | Wheat | endoplasmic reticulum, extracellular | 79.27 | 79.27 |
| CDY65544 | Canola | endoplasmic reticulum, extracellular | 78.24 | 79.06 |
| KRH02329 | Soybean | endoplasmic reticulum, extracellular | 78.76 | 78.76 |
| KRH11980 | Soybean | endoplasmic reticulum, extracellular | 78.76 | 78.76 |
| KRH37008 | Soybean | endoplasmic reticulum | 78.76 | 78.76 |
| PGSC0003DMT400007183 | Potato | endoplasmic reticulum, golgi | 78.76 | 78.76 |
| PGSC0003DMT400068658 | Potato | endoplasmic reticulum, extracellular | 78.76 | 78.76 |
| CDY32159 | Canola | endoplasmic reticulum, golgi | 78.76 | 78.76 |
| CDY31105 | Canola | endoplasmic reticulum, golgi | 78.76 | 78.76 |
| CDX95000 | Canola | endoplasmic reticulum, golgi | 78.76 | 78.76 |
| CDX93520 | Canola | endoplasmic reticulum, golgi | 78.76 | 78.76 |
| Solyc01g100350.2.1 | Tomato | plastid | 78.76 | 78.76 |
| Bra018576.1-P | Field mustard | endoplasmic reticulum, golgi | 78.76 | 78.76 |
| VIT_05s0077g01230.t01 | Wine grape | endoplasmic reticulum, extracellular | 78.76 | 78.76 |
| AT3G62560.1 | Thale cress | endoplasmic reticulum | 78.76 | 78.76 |
| AT1G56330.1 | Thale cress | endoplasmic reticulum | 78.76 | 78.76 |
| Solyc01g079540.2.1 | Tomato | plastid | 78.24 | 78.24 |
| Solyc01g060130.2.1 | Tomato | endoplasmic reticulum, extracellular | 78.24 | 78.24 |
| PGSC0003DMT400023327 | Potato | endoplasmic reticulum, extracellular | 78.24 | 78.24 |
| PGSC0003DMT400018800 | Potato | cytosol | 78.24 | 78.24 |
| Solyc06g009660.2.1 | Tomato | extracellular | 78.24 | 78.24 |
| TraesCS5B01G095200.1 | Wheat | endoplasmic reticulum, extracellular | 78.24 | 78.24 |
| KRH68446 | Soybean | endoplasmic reticulum | 78.24 | 78.24 |
| AT1G09180.1 | Thale cress | extracellular | 78.24 | 78.24 |
| KXG28257 | Sorghum | endoplasmic reticulum | 78.24 | 77.84 |
| AT4G02080.1 | Thale cress | endoplasmic reticulum | 77.72 | 77.72 |
| Bra000895.1-P | Field mustard | endoplasmic reticulum, extracellular | 77.72 | 77.72 |
| KRG92955 | Soybean | endoplasmic reticulum, extracellular | 77.72 | 77.72 |
| CDX90955 | Canola | endoplasmic reticulum, extracellular | 77.72 | 77.72 |
| CDX91807 | Canola | endoplasmic reticulum, extracellular | 77.72 | 77.72 |
| CDY22027 | Canola | endoplasmic reticulum, extracellular | 77.72 | 77.72 |
| Bra027937.1-P | Field mustard | endoplasmic reticulum, extracellular | 78.24 | 77.44 |
| Bra038169.1-P | Field mustard | endoplasmic reticulum, extracellular | 78.24 | 77.44 |
| CDY59269 | Canola | endoplasmic reticulum, extracellular | 78.24 | 77.44 |
| CDY41713 | Canola | endoplasmic reticulum, extracellular | 78.24 | 77.44 |
| CDY39001 | Canola | endoplasmic reticulum, extracellular | 78.24 | 77.44 |
| KRH33832 | Soybean | endoplasmic reticulum | 77.2 | 77.2 |
| KRH50760 | Soybean | endoplasmic reticulum | 77.2 | 77.2 |
| KRG96730 | Soybean | endoplasmic reticulum | 77.2 | 77.2 |
| KRH02328 | Soybean | endoplasmic reticulum | 77.2 | 77.2 |
| Os06t0225000-00 | Rice | endoplasmic reticulum | 77.2 | 76.8 |
| EES15193 | Sorghum | endoplasmic reticulum | 77.2 | 76.41 |
| Zm00001d049068_P001 | Maize | cytosol | 75.65 | 75.26 |
| GSMUA_Achr9P21350_001 | Banana | endoplasmic reticulum, extracellular | 75.13 | 75.13 |
| VIT_16s0013g00170.t01 | Wine grape | cytosol | 40.93 | 73.15 |
| VIT_05s0165g00230.t01 | Wine grape | cytosol | 59.07 | 67.06 |
| AT1G02620.1 | Thale cress | endoplasmic reticulum | 40.93 | 64.75 |
| VIT_14s0060g01340.t01 | Wine grape | endoplasmic reticulum, extracellular | 70.98 | 57.81 |
| VIT_02s0033g01130.t01 | Wine grape | cytosol | 37.82 | 41.01 |
| Bra036294.1-P | Field mustard | endoplasmic reticulum | 77.2 | 36.52 |
| CDY07095 | Canola | endoplasmic reticulum | 77.2 | 36.43 |
| TraesCS6B01G324400.2 | Wheat | cytosol | 31.09 | 32.61 |
| TraesCS4B01G260300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.05 | 31.52 |
Protein Annotations
| MapMan:22.4.2.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| InterPro:IPR006687 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 | PFscan:PS51422 | PANTHER:PTHR11711 |
| PANTHER:PTHR11711:SF203 | SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF/SAR |
| InterPro:Small_GTPase_SAR1 | TIGRFAMs:TIGR00231 | EnsemblPlantsGene:TraesCS7B01G236300 | EnsemblPlants:TraesCS7B01G236300.1 | TIGR:cd00879 | SEG:seg |
Description
No Description!
Coordinates
chr7B:+:440347998..440349235
Molecular Weight (calculated)
22138.7 Da
IEP (calculated)
7.162
GRAVY (calculated)
-0.170
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MILVDWFFDA LAYLGLWQKD AKILFLGLDN AGKTTLLQML KDERLAQHQP TQHPTSEELS IGKIRFKAFD LGGHAFARRV WKDYFAKVDA VVYLVDAADR
101: ERFNETKQEL DALLSAEALF NVPFLVLGNK IDIASALSEH ELRYYLGLEY HTTGKGNVDL SHNGRRPLEV FMCSVVRKMG YGDGFRWMSQ YIK
101: ERFNETKQEL DALLSAEALF NVPFLVLGNK IDIASALSEH ELRYYLGLEY HTTGKGNVDL SHNGRRPLEV FMCSVVRKMG YGDGFRWMSQ YIK
001: MGPLTRVLIL VEWFSQVDAL VYLVDAYDQE RFAESKKELD ALLSDESLAT VPFLILGNKI DIPYAASEDE LRFHLGLSNF TTGKGKVNLT DSNVRPLEVF
101: MCSIVRKMGY GEGFKWLSQY IK
101: MCSIVRKMGY GEGFKWLSQY IK
Arabidopsis Description
Ras-related small GTP-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q3E6Q3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.