Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 5
- vacuole 4
- plasma membrane 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0013g00170.t01 | Wine grape | cytosol | 75.41 | 85.19 |
| AT4G02080.1 | Thale cress | endoplasmic reticulum | 85.25 | 53.89 |
| TraesCS5A01G089200.1 | Wheat | golgi | 81.97 | 51.81 |
| AT1G56330.1 | Thale cress | endoplasmic reticulum | 81.15 | 51.3 |
| EES00709 | Sorghum | endoplasmic reticulum, extracellular | 81.15 | 51.3 |
| TraesCS5D01G101300.1 | Wheat | golgi | 81.15 | 51.3 |
| Zm00001d040752_P001 | Maize | endoplasmic reticulum, extracellular | 81.15 | 51.3 |
| AT3G62560.1 | Thale cress | endoplasmic reticulum | 80.33 | 50.78 |
| TraesCS5B01G095200.1 | Wheat | endoplasmic reticulum, extracellular | 80.33 | 50.78 |
| TraesCS3B01G221700.1 | Wheat | endoplasmic reticulum, extracellular | 80.33 | 50.78 |
| TraesCS3A01G193800.1 | Wheat | golgi | 80.33 | 50.78 |
| Solyc01g100350.2.1 | Tomato | plastid | 80.33 | 50.78 |
| PGSC0003DMT400007183 | Potato | endoplasmic reticulum, golgi | 80.33 | 50.78 |
| KRH68446 | Soybean | endoplasmic reticulum | 80.33 | 50.78 |
| KRG96730 | Soybean | endoplasmic reticulum | 80.33 | 50.78 |
| Os01t0338000-01 | Rice | plasma membrane | 79.51 | 50.26 |
| TraesCS3D01G196200.1 | Wheat | endoplasmic reticulum, extracellular | 79.51 | 50.26 |
| KXG23692 | Sorghum | endoplasmic reticulum, extracellular | 79.51 | 50.26 |
| KRG92955 | Soybean | endoplasmic reticulum, extracellular | 79.51 | 50.26 |
| KRH33832 | Soybean | endoplasmic reticulum | 79.51 | 50.26 |
| Os01t0254000-01 | Rice | plasma membrane | 78.69 | 49.74 |
| Os12t0560300-01 | Rice | plasma membrane | 78.69 | 49.74 |
| TraesCS3B01G203800.1 | Wheat | endoplasmic reticulum | 77.87 | 49.22 |
| Zm00001d040278_P001 | Maize | extracellular | 77.87 | 49.22 |
| EES02699 | Sorghum | endoplasmic reticulum, extracellular | 77.87 | 49.22 |
| TraesCS3A01G172900.1 | Wheat | golgi | 77.87 | 49.22 |
| HORVU3Hr1G035000.2 | Barley | plasma membrane | 77.87 | 49.22 |
| AT1G09180.1 | Thale cress | extracellular | 77.05 | 48.7 |
| TraesCS3D01G179300.1 | Wheat | endoplasmic reticulum, extracellular | 77.87 | 47.26 |
| PGSC0003DMT400068658 | Potato | endoplasmic reticulum, extracellular | 74.59 | 47.15 |
| Solyc01g060130.2.1 | Tomato | endoplasmic reticulum, extracellular | 73.77 | 46.63 |
| HORVU3Hr1G045150.3 | Barley | plastid | 78.69 | 43.05 |
| Os06t0225000-00 | Rice | endoplasmic reticulum | 65.57 | 41.24 |
| TraesCS7B01G236300.1 | Wheat | cytosol | 64.75 | 40.93 |
| HORVU7Hr1G080190.1 | Barley | endoplasmic reticulum | 63.93 | 40.41 |
| EES15193 | Sorghum | endoplasmic reticulum | 63.93 | 40.0 |
| TraesCS7D01G332100.1 | Wheat | endoplasmic reticulum | 63.11 | 39.9 |
| Zm00001d049068_P001 | Maize | cytosol | 63.11 | 39.69 |
| KXG28257 | Sorghum | endoplasmic reticulum | 63.11 | 39.69 |
| VIT_14s0060g01340.t01 | Wine grape | endoplasmic reticulum, extracellular | 62.3 | 32.07 |
| Zm00001d009211_P001 | Maize | mitochondrion | 81.15 | 30.28 |
| AT3G49860.1 | Thale cress | cytosol | 32.79 | 22.73 |
| AT5G67560.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 32.79 | 21.74 |
| AT3G49870.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 32.79 | 21.74 |
| AT5G37680.1 | Thale cress | cytosol | 30.33 | 20.11 |
| GSMUA_Achr11P... | Banana | mitochondrion, plastid | 25.41 | 12.76 |
| AT4G02090.1 | Thale cress | cytosol, nucleus, plastid | 20.49 | 12.38 |
Protein Annotations
| MapMan:22.4.2.1 | Gene3D:3.40.50.300 | EntrezGene:839269 | ProteinID:AEE27450.1 | ArrayExpress:AT1G02620 | EnsemblPlantsGene:AT1G02620 |
| RefSeq:AT1G02620 | TAIR:AT1G02620 | RefSeq:AT1G02620-TAIR-G | EnsemblPlants:AT1G02620.1 | TAIR:AT1G02620.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | InterPro:IPR006687 | RefSeq:NP_001318907.1 | InterPro:P-loop_NTPase |
| PFAM:PF00025 | PO:PO:0000293 | PRINTS:PR00328 | PFscan:PS51422 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF165 |
| UniProt:Q3E6Q3 | SMART:SM00178 | SUPFAM:SSF52540 | SignalP:SignalP-noTM | InterPro:Small_GTPase_ARF/SAR | InterPro:Small_GTPase_SAR1 |
| UniParc:UPI0000162C17 | : | : | : | : | : |
Description
Ras-related small GTP-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q3E6Q3]
Coordinates
chr1:+:557092..558774
Molecular Weight (calculated)
13826.7 Da
IEP (calculated)
4.693
GRAVY (calculated)
0.037
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPLTRVLIL VEWFSQVDAL VYLVDAYDQE RFAESKKELD ALLSDESLAT VPFLILGNKI DIPYAASEDE LRFHLGLSNF TTGKGKVNLT DSNVRPLEVF
101: MCSIVRKMGY GEGFKWLSQY IK
101: MCSIVRKMGY GEGFKWLSQY IK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.