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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 6
  • extracellular 4
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
EpiLoc:endoplasmic reticulum
MultiLoc:extracellular
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:endoplasmic reticulum
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_02s0012g01860.t01
VIT_03s0038g04360.t01
VIT_06s0080g00970.t01
VIT_08s0007g01140.t01
VIT_09s0002g02400.t01
VIT_11s0016g00400.t01
VIT_11s0016g03780.t01
VIT_16s0050g01050.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G09180.1 VIT_16s0050g01050.t01 AT4G25660.1 21798944
AT1G09180.1 VIT_16s0050g01050.t01 AT4G25680.1 21798944
AT1G09180.1 VIT_08s0007g01140.t01 AT5G02040.1 21798944
AT1G56330.1 VIT_11s0016g03780.t01 AT2G20130.1 21798944
AT1G56330.1 VIT_09s0002g02400.t01 AT3G13710.1 21798944
AT1G56330.1 VIT_09s0002g02400.t01 AT3G13720.1 21798944
AT1G56330.1 VIT_11s0016g00400.t01 AT3G43230.1 21798944
AT1G56330.1 VIT_02s0012g01860.t01 AT4G17720.1 21798944
AT1G56330.1 VIT_06s0080g00970.t01 AT5G22290.1 21798944
AT4G02080.1 VIT_03s0038g04360.t01 AT1G22920.1 21798944
AT4G02080.1 VIT_03s0038g04360.t01 AT1G71230.1 21798944
AT4G02080.1 VIT_09s0002g02400.t01 AT3G13720.1 21798944
AT4G02080.1 VIT_16s0050g01050.t01 AT4G25680.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_07s0005g01330.t01 Wine grape endoplasmic reticulum, extracellular 70.04 86.01
VIT_05s0077g01230.t01 Wine grape endoplasmic reticulum, extracellular 67.93 83.42
Zm00001d040752_P001 Maize endoplasmic reticulum, extracellular 67.09 82.38
TraesCS3A01G193800.1 Wheat golgi 67.09 82.38
TraesCS3B01G221700.1 Wheat endoplasmic reticulum, extracellular 67.09 82.38
KRH68446 Soybean endoplasmic reticulum 67.09 82.38
KRG96730 Soybean endoplasmic reticulum 67.09 82.38
TraesCS5A01G089200.1 Wheat golgi 67.09 82.38
EES00709 Sorghum endoplasmic reticulum, extracellular 67.09 82.38
CDY22027 Canola endoplasmic reticulum, extracellular 67.09 82.38
CDX90955 Canola endoplasmic reticulum, extracellular 67.09 82.38
Bra000895.1-P Field mustard endoplasmic reticulum, extracellular 67.09 82.38
AT1G56330.1 Thale cress endoplasmic reticulum 67.09 82.38
CDY65544 Canola endoplasmic reticulum, extracellular 66.24 82.2
CDX91807 Canola endoplasmic reticulum, extracellular 66.67 81.87
TraesCS5D01G101300.1 Wheat golgi 66.67 81.87
AT4G02080.1 Thale cress endoplasmic reticulum 66.67 81.87
KRH33832 Soybean endoplasmic reticulum 66.67 81.87
TraesCS3D01G196200.1 Wheat endoplasmic reticulum, extracellular 66.67 81.87
Os01t0338000-01 Rice plasma membrane 66.67 81.87
Os12t0560300-01 Rice plasma membrane 66.67 81.87
CDY39001 Canola endoplasmic reticulum, extracellular 67.09 81.54
Bra038169.1-P Field mustard endoplasmic reticulum, extracellular 67.09 81.54
AT3G62560.1 Thale cress endoplasmic reticulum 66.24 81.35
PGSC0003DMT400007183 Potato endoplasmic reticulum, golgi 66.24 81.35
Solyc01g100350.2.1 Tomato plastid 66.24 81.35
TraesCS5B01G095200.1 Wheat endoplasmic reticulum, extracellular 66.24 81.35
Bra027937.1-P Field mustard endoplasmic reticulum, extracellular 66.67 81.03
CDY59269 Canola endoplasmic reticulum, extracellular 66.67 81.03
CDY41713 Canola endoplasmic reticulum, extracellular 66.67 81.03
Bra018576.1-P Field mustard endoplasmic reticulum, golgi 65.82 80.83
TraesCS3A01G172900.1 Wheat golgi 65.82 80.83
CDX93520 Canola endoplasmic reticulum, golgi 65.82 80.83
TraesCS3B01G203800.1 Wheat endoplasmic reticulum 65.82 80.83
CDX95000 Canola endoplasmic reticulum, golgi 65.82 80.83
CDY31105 Canola endoplasmic reticulum, golgi 65.82 80.83
CDY32159 Canola endoplasmic reticulum, golgi 65.82 80.83
KXG23692 Sorghum endoplasmic reticulum, extracellular 65.82 80.83
KRG92955 Soybean endoplasmic reticulum, extracellular 65.82 80.83
HORVU3Hr1G035000.2 Barley plasma membrane 65.82 80.83
Os01t0254000-01 Rice plasma membrane 65.4 80.31
Zm00001d040278_P001 Maize extracellular 65.4 80.31
EES02699 Sorghum endoplasmic reticulum, extracellular 65.4 80.31
AT1G09180.1 Thale cress extracellular 64.98 79.79
PGSC0003DMT400068658 Potato endoplasmic reticulum, extracellular 64.98 79.79
Solyc01g060130.2.1 Tomato endoplasmic reticulum, extracellular 64.56 79.27
TraesCS3D01G179300.1 Wheat endoplasmic reticulum, extracellular 65.82 77.61
VIT_16s0013g00170.t01 Wine grape cytosol 32.91 72.22
EES15193 Sorghum endoplasmic reticulum 59.07 71.79
TraesCS7B01G236300.1 Wheat cytosol 57.81 70.98
TraesCS7D01G332100.1 Wheat endoplasmic reticulum 57.81 70.98
HORVU7Hr1G080190.1 Barley endoplasmic reticulum 57.38 70.47
KXG28257 Sorghum endoplasmic reticulum 57.38 70.1
Zm00001d049068_P001 Maize cytosol 56.96 69.59
Os06t0225000-00 Rice endoplasmic reticulum 56.54 69.07
VIT_05s0165g00230.t01 Wine grape cytosol 47.26 65.88
AT1G02620.1 Thale cress endoplasmic reticulum 32.07 62.3
HORVU3Hr1G045150.3 Barley plastid 54.43 57.85
Zm00001d009211_P001 Maize mitochondrion 67.09 48.62
VIT_15s0024g01360.t01 Wine grape cytosol 8.02 39.58
Bra036294.1-P Field mustard endoplasmic reticulum 66.67 38.73
CDY07095 Canola endoplasmic reticulum 66.67 38.63
VIT_02s0033g01130.t01 Wine grape cytosol 28.69 38.2
VIT_00s0601g00030.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 23.21 29.89
VIT_03s0091g00970.t01 Wine grape cytosol 23.21 29.89
VIT_14s0006g01090.t01 Wine grape cytosol 20.68 29.7
GSMUA_Achr11P... Banana mitochondrion, plastid 27.85 27.16
Protein Annotations
MapMan:22.4.2.1Gene3D:3.40.50.300ProteinID:CCB61907ProteinID:CCB61907.1UniProt:F6I4S0EMBL:FN596746
GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005525GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0006810GO:GO:0006886GO:GO:0008150InterPro:IPR006687InterPro:P-loop_NTPase
PFAM:PF00025PRINTS:PR00328PFscan:PS51422PANTHER:PTHR11711PANTHER:PTHR11711:SF165SMART:SM00178
SUPFAM:SSF52540InterPro:Small_GTPase_ARF/SARInterPro:Small_GTPase_SAR1UniParc:UPI0002108BB7ArrayExpress:VIT_14s0060g01340EnsemblPlantsGene:VIT_14s0060g01340
EnsemblPlants:VIT_14s0060g01340.t01:::::
Description
No Description!
Coordinates
chr14:+:1059364..1062672
Molecular Weight (calculated)
27618.9 Da
IEP (calculated)
9.956
GRAVY (calculated)
-0.154
Length
237 amino acids
Sequence
(BLAST)
001: MFLLDWFYGV LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQYPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKKLI MVVRCGTFCF
101: PGDKLLMCLF DSWEADINYG SSLMAPFFPR RWMQLFTWWM PMTRRDLQSR KKSWMLSSPT RPWPNVPFLV LGNKIDIPYA ASEDELRYHL GLTNFTTGKG
201: KVSLADSNVR PLEVFMCSIV RKMGYGDGFK WLSQYIK
Best Arabidopsis Sequence Match ( AT4G02080.1 )
(BLAST)
001: MFMIDWFYGV LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLA SVPFLILGNK IDIPYAASED ELRYHLGLSN FTTGKGKVNL TDSNVRPLEV FMCSIVRKMG YGEGFKWVSQ YIK
Arabidopsis Description
SAR1ASAR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V5S8]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.