Factsheet for VIT_03s0091g00970.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0601g00030.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	89.13	89.13
GSMUA_Achr8P30960_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	89.13	89.13
GSMUA_Achr1P22490_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	86.41	86.41
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.24	84.24
EER92687	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	83.7	83.7
Os03t0200800-01	Rice	plasma membrane	82.61	82.61
TraesCS4A01G045000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	82.61	82.61
TraesCS4B01G260300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	82.61	82.61
TraesCS4D01G260100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	82.61	82.61
Zm00001d048155_P001	Maize	extracellular	82.07	82.07
Zm00001d028112_P001	Maize	extracellular	80.98	80.98
KRG91118	Soybean	extracellular	53.26	77.78
VIT_14s0006g01090.t01	Wine grape	cytosol	68.48	76.36
VIT_15s0024g01360.t01	Wine grape	cytosol	19.02	72.92
HORVU4Hr1G070410.2	Barley	cytosol	82.61	62.81
VIT_16s0013g00170.t01	Wine grape	cytosol	19.57	33.33
VIT_07s0005g01330.t01	Wine grape	endoplasmic reticulum, extracellular	33.7	32.12
VIT_05s0077g01230.t01	Wine grape	endoplasmic reticulum, extracellular	33.7	32.12
VIT_05s0165g00230.t01	Wine grape	cytosol	27.72	30.0
VIT_14s0060g01340.t01	Wine grape	endoplasmic reticulum, extracellular	29.89	23.21
VIT_02s0033g01130.t01	Wine grape	cytosol	16.85	17.42

Protein Annotations

EntrezGene:100244584	wikigene:100244584	MapMan:26.10.2.4	Gene3D:3.40.50.300	ProteinID:CBI22442	ProteinID:CBI22442.3
UniProt:D7SXP2	EMBL:FN595242	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0007264
GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156	EntrezGene:LOC100244584	wikigene:LOC100244584	InterPro:P-loop_NTPase
PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711	PANTHER:PTHR11711:SF231	SMART:SM00175
SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR
TIGR:TC61535	TIGRFAMs:TIGR00231	UniParc:UPI0001982E8C	ArrayExpress:VIT_03s0091g00970	EnsemblPlantsGene:VIT_03s0091g00970	EnsemblPlants:VIT_03s0091g00970.t01
unigene:Vvi.6607	RefSeq:XP_002266421	RefSeq:XP_002266421.1	:	:	:

Description

No Description!

Coordinates

chr3:+:7469828..7484328

Molecular Weight (calculated)

20624.2 Da

IEP (calculated)

8.624

GRAVY (calculated)

-0.107

Length

184 amino acids

Sequence
(BLAST)

001: MGLWESLLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVIA TGGYTEDMIP TVGFNMRKVT KGNVTIKLWD LGGQPRFRSM WERYCRAVSA IVYVVDAADP
101: DNLTVSRGEL HDLLSKASLN GIPLLVLGNK IDKPGALSKP ELTEQMELRS ITNREVCCYM ISCKNSTNID TVIDWLVKHS KSKN

Best Arabidopsis Sequence Match ( AT3G49870.1 )
(BLAST)

001: MGLLEAFLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT KGNVTIKLWD LGGQPRFRSM WERYCRAVSA IVYVVDAADP
101: DNLSVSKSEL HDLLSKTSLN GIPLLVLGNK IDKPGALSKE ALTDEMGLTS LTDREVCCFM ISCKNSTNID QVIDWLVKHS KSKN

Arabidopsis Description

ARL8AADP-ribosylation factor-like protein 8a [Source:UniProtKB/Swiss-Prot;Acc:Q8VY57]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.