Factsheet for Zm00001d028112_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048155_P001	Maize	extracellular	96.74	96.74
EER92687	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	96.2	96.2
Os03t0200800-01	Rice	plasma membrane	94.57	94.57
TraesCS4D01G260100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	94.02	94.02
TraesCS4B01G260300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	94.02	94.02
TraesCS4A01G045000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	94.02	94.02
CDY43583	Canola	cytosol	36.41	88.16
GSMUA_Achr8P30960_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	86.41	86.41
Solyc02g092330.2.1	Tomato	plastid	84.24	84.24
VIT_00s0601g00030.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.24	84.24
PGSC0003DMT400055238	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	83.7	83.7
PGSC0003DMT400008577	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	83.7	83.7
KRH77133	Soybean	endoplasmic reticulum	83.7	83.7
KRH58117	Soybean	endoplasmic reticulum	83.7	83.7
Solyc02g064640.2.1	Tomato	extracellular	83.15	83.15
KRH28350	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	83.15	83.15
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	82.61	82.61
GSMUA_Achr1P22490_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	82.07	82.07
PGSC0003DMT400023482	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	81.52	81.52
Solyc03g043960.2.1	Tomato	plastid	81.52	81.52
AT3G49870.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	81.52	81.52
CDY23031	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	81.52	81.52
CDY02106	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	81.52	81.52
Bra012918.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	81.52	81.52
VIT_03s0091g00970.t01	Wine grape	cytosol	80.98	80.98
CDY08727	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	80.43	80.43
Bra024440.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	80.43	80.43
CDY36501	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	79.89	79.89
CDY18665	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	79.89	79.89
AT5G67560.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	79.89	79.89
Bra037841.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	79.35	79.35
CDX81307	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.26	78.26
KRG91118	Soybean	extracellular	50.0	73.02
HORVU4Hr1G070410.2	Barley	cytosol	94.02	71.49
AT3G49860.1	Thale cress	cytosol	66.3	69.32
VIT_15s0024g01360.t01	Wine grape	cytosol	17.39	66.67
CDY06369	Canola	cytosol	64.13	64.84
Bra031680.1-P	Field mustard	cytosol	57.07	64.42
Zm00001d000379_P002	Maize	mitochondrion	75.54	61.5
Zm00001d017945_P002	Maize	mitochondrion	61.96	58.46
CDX68554	Canola	cytosol	39.13	55.81
Bra029979.1-P	Field mustard	mitochondrion	34.24	37.5
Zm00001d040752_P001	Maize	endoplasmic reticulum, extracellular	33.7	32.12
Zm00001d049068_P001	Maize	cytosol	33.7	31.96
Zm00001d040278_P001	Maize	extracellular	31.52	30.05
Zm00001d009211_P001	Maize	mitochondrion	33.7	18.96

Protein Annotations

EntrezGene:100282662	MapMan:26.10.2.4	Gene3D:3.40.50.300	UniProt:B6TA16	EMBL:EU961831	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
ProteinID:ONL94745.1	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF293	SMART:SM00173	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI000182CC55	EnsemblPlantsGene:Zm00001d028112
EnsemblPlants:Zm00001d028112_P001	EnsemblPlants:Zm00001d028112_T001	:	:	:	:

Description

ADP-ribosylation factor-like protein 8B

Coordinates

chr1:+:23147728..23150781

Molecular Weight (calculated)

20737.3 Da

IEP (calculated)

9.564

GRAVY (calculated)

-0.086

Length

184 amino acids

Sequence
(BLAST)

001: MGFWEFFLNW LRSLFFKQEM ELSLVGLQNA GKTSLVNSIA TGGFSEDMIP TVGFNMRKVT KGNVTIKLWD IGGQPRFRSM WERYCRAVSA IVYVVDAADR
101: ENMAIAKGEL HDLLSKPSLT GIPLLVIGNK IDKPEAFPKQ TFTEIMGLKT ITDREVACFM TSCKNSTNID SVIDWLVKNS KKKN

Best Arabidopsis Sequence Match ( AT3G49870.1 )
(BLAST)

001: MGLLEAFLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT KGNVTIKLWD LGGQPRFRSM WERYCRAVSA IVYVVDAADP
101: DNLSVSKSEL HDLLSKTSLN GIPLLVLGNK IDKPGALSKE ALTDEMGLTS LTDREVCCFM ISCKNSTNID QVIDWLVKHS KSKN

Arabidopsis Description

ARL8AADP-ribosylation factor-like protein 8a [Source:UniProtKB/Swiss-Prot;Acc:Q8VY57]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.