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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, secretory
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024440.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 100.0 100.0
CDY36501 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 99.46 99.46
CDY18665 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 98.91 98.91
CDX81307 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 97.83 97.83
CDY43583 Canola cytosol 40.22 97.37
AT5G67560.1 Thale cress cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 96.2 96.2
CDY23031 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 94.02 94.02
CDY02106 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 94.02 94.02
VIT_00s0601g00030.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 92.39 92.39
PGSC0003DMT400008577 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 91.85 91.85
Solyc02g064640.2.1 Tomato extracellular 91.85 91.85
KRH28350 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 91.3 91.3
KRH58117 Soybean endoplasmic reticulum 91.3 91.3
KRH77133 Soybean endoplasmic reticulum 90.76 90.76
Solyc02g092330.2.1 Tomato plastid 90.76 90.76
GSMUA_Achr8P30960_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 90.22 90.22
PGSC0003DMT400055238 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 90.22 90.22
PGSC0003DMT400023482 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 89.13 89.13
Solyc03g043960.2.1 Tomato plastid 88.59 88.59
GSMUA_AchrUn_... Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 88.04 88.04
GSMUA_Achr1P22490_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 85.33 85.33
TraesCS4A01G045000.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 84.24 84.24
TraesCS4B01G260300.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 84.24 84.24
TraesCS4D01G260100.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 84.24 84.24
EER92687 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 83.7 83.7
Os03t0200800-01 Rice plasma membrane 83.7 83.7
Zm00001d048155_P001 Maize extracellular 82.07 82.07
Zm00001d028112_P001 Maize extracellular 80.43 80.43
CDY06369 Canola cytosol 70.65 71.43
HORVU4Hr1G070410.2 Barley cytosol 84.24 64.05
CDY37846 Canola cytosol, mitochondrion, nucleus, plastid 44.02 63.28
CDX68554 Canola cytosol 42.93 61.24
CDY01716 Canola cytosol 70.11 57.33
CDY01715 Canola cytosol 70.11 57.33
CDX74569 Canola cytosol 70.11 57.08
CDX91807 Canola endoplasmic reticulum, extracellular 34.78 33.16
CDY22027 Canola endoplasmic reticulum, extracellular 34.24 32.64
CDX90955 Canola endoplasmic reticulum, extracellular 34.24 32.64
CDY65544 Canola endoplasmic reticulum, extracellular 33.7 32.46
CDY32159 Canola endoplasmic reticulum, golgi 33.7 32.12
CDY59269 Canola endoplasmic reticulum, extracellular 33.7 31.79
CDY41713 Canola endoplasmic reticulum, extracellular 33.7 31.79
CDY39001 Canola endoplasmic reticulum, extracellular 33.7 31.79
CDY31105 Canola endoplasmic reticulum, golgi 33.15 31.61
CDX95000 Canola endoplasmic reticulum, golgi 33.15 31.61
CDX93520 Canola endoplasmic reticulum, golgi 33.15 31.61
CDY07095 Canola endoplasmic reticulum 33.7 15.16
CDY22028 Canola nucleus 13.59 12.2
Protein Annotations
MapMan:26.10.2.4Gene3D:3.40.50.300GO:A0A078F6K2UniProt:A0A078F6K2EnsemblPlants:CDY08727ProteinID:CDY08727
ProteinID:CDY08727.1GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005525GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0007154GO:GO:0007165GO:GO:0007264GO:GO:0008150
GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00000652001InterPro:IPR024156InterPro:P-loop_NTPasePFAM:PF00025PRINTS:PR00328
PFscan:PS51417PANTHER:PTHR11711PANTHER:PTHR11711:SF231SMART:SM00175SMART:SM00177SMART:SM00178
SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPase_ARFInterPro:Small_GTPase_ARF/SARTIGRFAMs:TIGR00231UniParc:UPI000253EEC1
Description
BnaA06g24970DBnaA06g24970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6K2]
Coordinates
chrLK031989:+:52754..54614
Molecular Weight (calculated)
20412.7 Da
IEP (calculated)
7.291
GRAVY (calculated)
-0.040
Length
184 amino acids
Sequence
(BLAST)
001: MGLWDAFLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT KGSVTIKLWD LGGQPRFRSM WERYCRSVSA IVYVVDAADP
101: DNLSVSKSEL HDLLSKTSLS GIPLLVLGNK IDKPGALSKD DLTEEMGLKS LTDREVCCFM ISCKNSTNID QVIDWLVKHS KSAS
Best Arabidopsis Sequence Match ( AT5G67560.1 )
(BLAST)
001: MGLWDALLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT KGSVTIKLWD LGGQPRFRSM WERYCRSVSA IVYVVDAADP
101: DNLSVSKSEL HDLLSKTSLN GIPLLVLGNK IDKPGALSKE ALTDEMGLKS LTDREVCCFM ISCKNSTNID QVIDWLVKHS KSSN
Arabidopsis Description
ARL8BADP-ribosylation factor-like protein 8b [Source:UniProtKB/Swiss-Prot;Acc:Q93Y31]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.