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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 3
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G67560.1 Thale cress cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 97.37 40.22
CDY36501 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 97.37 40.22
CDY18665 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 97.37 40.22
CDY08727 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 97.37 40.22
CDX81307 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 96.05 39.67
VIT_00s0601g00030.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 96.05 39.67
KRH28350 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 94.74 39.13
KRH77133 Soybean endoplasmic reticulum 94.74 39.13
CDY23031 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 94.74 39.13
CDY02106 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 94.74 39.13
GSMUA_AchrUn_... Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 93.42 38.59
GSMUA_Achr8P30960_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 93.42 38.59
Solyc03g043960.2.1 Tomato plastid 93.42 38.59
Solyc02g092330.2.1 Tomato plastid 93.42 38.59
KRH58117 Soybean endoplasmic reticulum 93.42 38.59
Solyc02g064640.2.1 Tomato extracellular 93.42 38.59
PGSC0003DMT400055238 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 93.42 38.59
PGSC0003DMT400023482 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 93.42 38.59
PGSC0003DMT400008577 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 93.42 38.59
TraesCS4B01G260300.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 92.11 38.04
GSMUA_Achr1P22490_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 92.11 38.04
EER92687 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 92.11 38.04
Os03t0200800-01 Rice plasma membrane 92.11 38.04
TraesCS4D01G260100.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 92.11 38.04
TraesCS4A01G045000.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 92.11 38.04
Zm00001d048155_P001 Maize extracellular 90.79 37.5
Zm00001d028112_P001 Maize extracellular 88.16 36.41
CDY01715 Canola cytosol 88.16 29.78
CDY01716 Canola cytosol 88.16 29.78
CDX74569 Canola cytosol 88.16 29.65
HORVU4Hr1G070410.2 Barley cytosol 92.11 28.93
CDX68554 Canola cytosol 48.68 28.68
CDY06369 Canola cytosol 61.84 25.82
CDY65544 Canola endoplasmic reticulum, extracellular 31.58 12.57
CDY32159 Canola endoplasmic reticulum, golgi 31.58 12.44
CDY31105 Canola endoplasmic reticulum, golgi 31.58 12.44
CDY22027 Canola endoplasmic reticulum, extracellular 31.58 12.44
CDX95000 Canola endoplasmic reticulum, golgi 31.58 12.44
CDX93520 Canola endoplasmic reticulum, golgi 31.58 12.44
CDX91807 Canola endoplasmic reticulum, extracellular 31.58 12.44
CDX90955 Canola endoplasmic reticulum, extracellular 31.58 12.44
CDY59269 Canola endoplasmic reticulum, extracellular 31.58 12.31
CDY41713 Canola endoplasmic reticulum, extracellular 31.58 12.31
CDY39001 Canola endoplasmic reticulum, extracellular 31.58 12.31
CDY37846 Canola cytosol, mitochondrion, nucleus, plastid 10.53 6.25
CDY07095 Canola endoplasmic reticulum 31.58 5.87
CDY22028 Canola nucleus 10.53 3.9
Protein Annotations
EnsemblPlants:CDY43583EnsemblPlantsGene:GSBRNA2T00076889001Gene3D:3.40.50.300GO:A0A078I3B1GO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0005525InterPro:P-loop_NTPaseInterPro:Small_GTPase_ARF/SARPANTHER:PTHR11711PANTHER:PTHR11711:SF293
PFAM:PF00025PRINTS:PR00328ProteinID:CDY43583ProteinID:CDY43583.1SUPFAM:SSF52540UniParc:UPI0004EEC5E0
UniProt:A0A078I3B1MapMan:26.10.2.4::::
Description
BnaC02g16800DBnaC02g16800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3B1]
Coordinates
chrLK032561:+:237274..237581
Molecular Weight (calculated)
8455.4 Da
IEP (calculated)
10.059
GRAVY (calculated)
0.092
Length
76 amino acids
Sequence
(BLAST)
1: MELSLIGLQN AGKTSLVNVV ATGGYNEDMI PTVGFNMRKV TKGSVTIKLW DLGGQPRFRT MWERYCRSVS AIVYVV
Best Arabidopsis Sequence Match ( AT3G49870.1 )
(BLAST)
001: MGLLEAFLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT KGNVTIKLWD LGGQPRFRSM WERYCRAVSA IVYVVDAADP
101: DNLSVSKSEL HDLLSKTSLN GIPLLVLGNK IDKPGALSKE ALTDEMGLTS LTDREVCCFM ISCKNSTNID QVIDWLVKHS KSKN
Arabidopsis Description
ARL8AADP-ribosylation factor-like protein 8a [Source:UniProtKB/Swiss-Prot;Acc:Q8VY57]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.