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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:
  • plastid 1
  • cytosol 3
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, secretory
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012918.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 100.0 100.0
CDY23031 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 100.0 100.0
AT3G49870.1 Thale cress cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 97.83 97.83
CDY43583 Canola cytosol 39.13 94.74
CDY18665 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 94.02 94.02
CDY08727 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 94.02 94.02
VIT_00s0601g00030.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 93.48 93.48
CDY36501 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 93.48 93.48
CDX81307 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 92.93 92.93
KRH28350 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 92.93 92.93
KRH58117 Soybean endoplasmic reticulum 92.93 92.93
Solyc02g064640.2.1 Tomato extracellular 92.93 92.93
PGSC0003DMT400008577 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 92.39 92.39
KRH77133 Soybean endoplasmic reticulum 91.85 91.85
GSMUA_Achr8P30960_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 91.3 91.3
PGSC0003DMT400055238 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 90.76 90.76
Solyc02g092330.2.1 Tomato plastid 90.76 90.76
Solyc03g043960.2.1 Tomato plastid 89.67 89.67
PGSC0003DMT400023482 Potato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 89.13 89.13
GSMUA_AchrUn_... Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 88.04 88.04
GSMUA_Achr1P22490_001 Banana cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 86.41 86.41
Os03t0200800-01 Rice plasma membrane 85.33 85.33
TraesCS4A01G045000.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 85.33 85.33
TraesCS4B01G260300.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 85.33 85.33
TraesCS4D01G260100.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 85.33 85.33
EER92687 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 84.78 84.78
Zm00001d048155_P001 Maize extracellular 83.15 83.15
Zm00001d028112_P001 Maize extracellular 81.52 81.52
AT3G49860.1 Thale cress cytosol 77.17 80.68
CDY06369 Canola cytosol 72.83 73.63
HORVU4Hr1G070410.2 Barley cytosol 85.33 64.88
CDX68554 Canola cytosol 44.57 63.57
CDY37846 Canola cytosol, mitochondrion, nucleus, plastid 42.93 61.72
CDY01716 Canola cytosol 70.11 57.33
CDY01715 Canola cytosol 70.11 57.33
CDX74569 Canola cytosol 70.11 57.08
CDX91807 Canola endoplasmic reticulum, extracellular 33.7 32.12
CDY22027 Canola endoplasmic reticulum, extracellular 33.15 31.61
CDX90955 Canola endoplasmic reticulum, extracellular 33.15 31.61
CDY65544 Canola endoplasmic reticulum, extracellular 32.61 31.41
CDY39001 Canola endoplasmic reticulum, extracellular 32.61 30.77
CDY41713 Canola endoplasmic reticulum, extracellular 32.61 30.77
CDY59269 Canola endoplasmic reticulum, extracellular 32.61 30.77
CDY31105 Canola endoplasmic reticulum, golgi 32.07 30.57
CDX95000 Canola endoplasmic reticulum, golgi 32.07 30.57
CDX93520 Canola endoplasmic reticulum, golgi 32.07 30.57
CDY32159 Canola endoplasmic reticulum, golgi 32.07 30.57
CDY07095 Canola endoplasmic reticulum 32.61 14.67
CDY22028 Canola nucleus 14.67 13.17
Protein Annotations
MapMan:26.10.2.4Gene3D:3.40.50.300GO:A0A078GCG6UniProt:A0A078GCG6EnsemblPlants:CDY02106ProteinID:CDY02106
ProteinID:CDY02106.1ProteinID:CDY23031.1GO:GO:0000166GO:GO:0003674GO:GO:0005488GO:GO:0005525
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0007154GO:GO:0007165GO:GO:0007264
GO:GO:0008150GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00113492001InterPro:IPR024156InterPro:P-loop_NTPasePFAM:PF00025
PRINTS:PR00328PFscan:PS51417PANTHER:PTHR11711PANTHER:PTHR11711:SF293SMART:SM00175SMART:SM00177
SMART:SM00178SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPase_ARFInterPro:Small_GTPase_ARF/SARTIGRFAMs:TIGR00231
UniParc:UPI0001BA82DF:::::
Description
BnaA03g40610DBnaA03g40610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCG6]
Coordinates
chrLK031932:+:167036..168577
Molecular Weight (calculated)
20599.0 Da
IEP (calculated)
7.951
GRAVY (calculated)
-0.085
Length
184 amino acids
Sequence
(BLAST)
001: MGLWEAFLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT KGNVTIKLWD LGGQPRFRSM WERYCRAVSA IVYVVDAADP
101: DNLSVSKSEL HDLLSKTSLN GIPLLVLGNK IDKPGALSKE ALTHEMELQS LTDREVCCFM ISCKNSTNID QVIDWLVKHS KSKN
Best Arabidopsis Sequence Match ( AT3G49870.1 )
(BLAST)
001: MGLLEAFLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT KGNVTIKLWD LGGQPRFRSM WERYCRAVSA IVYVVDAADP
101: DNLSVSKSEL HDLLSKTSLN GIPLLVLGNK IDKPGALSKE ALTDEMGLTS LTDREVCCFM ISCKNSTNID QVIDWLVKHS KSKN
Arabidopsis Description
ARL8AADP-ribosylation factor-like protein 8a [Source:UniProtKB/Swiss-Prot;Acc:Q8VY57]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.