Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G49870.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 81.25 | 77.72 |
| CDY23031 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 80.68 | 77.17 |
| CDY02106 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 80.68 | 77.17 |
| Bra012918.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 80.68 | 77.17 |
| AT5G67560.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 79.55 | 76.09 |
| KRH28350 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 78.41 | 75.0 |
| VIT_00s0601g00030.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 78.41 | 75.0 |
| PGSC0003DMT400008577 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 78.41 | 75.0 |
| Solyc02g064640.2.1 | Tomato | extracellular | 77.84 | 74.46 |
| KRH58117 | Soybean | endoplasmic reticulum | 77.27 | 73.91 |
| KRH77133 | Soybean | endoplasmic reticulum | 77.27 | 73.91 |
| Solyc03g043960.2.1 | Tomato | plastid | 76.7 | 73.37 |
| Solyc02g092330.2.1 | Tomato | plastid | 76.7 | 73.37 |
| PGSC0003DMT400023482 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 76.7 | 73.37 |
| GSMUA_Achr8P30960_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 76.7 | 73.37 |
| PGSC0003DMT400055238 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 76.14 | 72.83 |
| GSMUA_Achr1P22490_001 | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 72.73 | 69.57 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 72.73 | 69.57 |
| TraesCS4A01G045000.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 71.59 | 68.48 |
| TraesCS4B01G260300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 71.59 | 68.48 |
| TraesCS4D01G260100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 71.59 | 68.48 |
| Os03t0200800-01 | Rice | plasma membrane | 71.02 | 67.93 |
| EER92687 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 71.02 | 67.93 |
| Zm00001d028112_P001 | Maize | extracellular | 69.32 | 66.3 |
| Zm00001d048155_P001 | Maize | extracellular | 69.32 | 66.3 |
| AT5G37680.1 | Thale cress | cytosol | 68.18 | 65.22 |
| Bra031680.1-P | Field mustard | cytosol | 59.09 | 63.8 |
| CDY06369 | Canola | cytosol | 61.36 | 59.34 |
| HORVU4Hr1G070410.2 | Barley | cytosol | 71.59 | 52.07 |
| CDX68554 | Canola | cytosol | 36.36 | 49.61 |
| AT1G02620.1 | Thale cress | endoplasmic reticulum | 22.73 | 32.79 |
| Bra029979.1-P | Field mustard | mitochondrion | 30.68 | 32.14 |
| AT4G02080.1 | Thale cress | endoplasmic reticulum | 32.95 | 30.05 |
| AT3G62560.1 | Thale cress | endoplasmic reticulum | 31.82 | 29.02 |
| AT1G56330.1 | Thale cress | endoplasmic reticulum | 30.68 | 27.98 |
| AT1G09180.1 | Thale cress | extracellular | 30.68 | 27.98 |
| AT4G02090.1 | Thale cress | cytosol, nucleus, plastid | 12.5 | 10.89 |
Protein Annotations
| MapMan:26.10.2.4 | Gene3D:3.40.50.300 | EntrezGene:824148 | ProteinID:AEE78599.1 | ArrayExpress:AT3G49860 | EnsemblPlantsGene:AT3G49860 |
| RefSeq:AT3G49860 | TAIR:AT3G49860 | RefSeq:AT3G49860-TAIR-G | EnsemblPlants:AT3G49860.1 | TAIR:AT3G49860.1 | Symbol:ATARLA1B |
| ProteinID:CAB66924.1 | UniProt:F4IZ82 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005764 | GO:GO:0005765 |
| GO:GO:0005768 | GO:GO:0005773 | GO:GO:0005819 | GO:GO:0005856 | GO:GO:0006950 | GO:GO:0007049 |
| GO:GO:0007059 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007264 | GO:GO:0008150 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0031902 | GO:GO:0051301 | GO:GO:0051607 |
| InterPro:IPR024156 | RefSeq:NP_190555.2 | InterPro:P-loop_NTPase | PFAM:PF00025 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0009005 | PO:PO:0020100 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00328 |
| PFscan:PS51417 | PANTHER:PTHR11711 | PANTHER:PTHR11711:SF293 | SMART:SM00173 | SMART:SM00175 | SMART:SM00177 |
| SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF | InterPro:Small_GTPase_ARF/SAR | TIGRFAMs:TIGR00231 |
| UniParc:UPI00015057F1 | : | : | : | : | : |
Description
ARL8DADP-ribosylation factor-like protein 8d [Source:UniProtKB/Swiss-Prot;Acc:F4IZ82]
Coordinates
chr3:-:18491084..18492241
Molecular Weight (calculated)
19489.7 Da
IEP (calculated)
5.704
GRAVY (calculated)
-0.033
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLQPNLQAK EMELSLVGLQ NSGKTSLVNV VATGEYSEDM IPTVGFNMRK VTKENVAIRL WDLGGQPRFR CMWERYCRAV SMIVYVVDAA DTENLSVSRS
101: ELHDLLSNAS LIGIPLLVLG NKIDIHGALS KEALTEEMGL SSVTSREVCC LMISCKNPTT IDQLTDWLVN HSKSKN
101: ELHDLLSNAS LIGIPLLVLG NKIDIHGALS KEALTEEMGL SSVTSREVCC LMISCKNPTT IDQLTDWLVN HSKSKN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.