Factsheet for Bra012918.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

plastid 1
cytosol 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02106	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	100.0	100.0
AT3G49870.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	97.83	97.83
Bra024440.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	94.02	94.02
VIT_00s0601g00030.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	93.48	93.48
KRH58117	Soybean	endoplasmic reticulum	92.93	92.93
KRH28350	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	92.93	92.93
Bra037841.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	92.93	92.93
Solyc02g064640.2.1	Tomato	extracellular	92.93	92.93
PGSC0003DMT400008577	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	92.39	92.39
KRH77133	Soybean	endoplasmic reticulum	91.85	91.85
GSMUA_Achr8P30960_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	91.3	91.3
Solyc02g092330.2.1	Tomato	plastid	90.76	90.76
PGSC0003DMT400055238	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	90.76	90.76
Solyc03g043960.2.1	Tomato	plastid	89.67	89.67
PGSC0003DMT400023482	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	89.13	89.13
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	88.04	88.04
GSMUA_Achr1P22490_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	86.41	86.41
TraesCS4A01G045000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	85.33	85.33
TraesCS4B01G260300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	85.33	85.33
TraesCS4D01G260100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	85.33	85.33
Os03t0200800-01	Rice	plasma membrane	85.33	85.33
EER92687	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.78	84.78
Zm00001d048155_P001	Maize	extracellular	83.15	83.15
Zm00001d028112_P001	Maize	extracellular	81.52	81.52
AT3G49860.1	Thale cress	cytosol	77.17	80.68
Bra028142.1-P	Field mustard	cytosol	78.26	78.26
Bra031680.1-P	Field mustard	cytosol	64.67	73.01
HORVU4Hr1G070410.2	Barley	cytosol	85.33	64.88
Bra029979.1-P	Field mustard	mitochondrion	39.67	43.45
Bra000895.1-P	Field mustard	endoplasmic reticulum, extracellular	33.15	31.61
Bra038169.1-P	Field mustard	endoplasmic reticulum, extracellular	32.61	30.77
Bra027937.1-P	Field mustard	endoplasmic reticulum, extracellular	32.61	30.77
Bra018576.1-P	Field mustard	endoplasmic reticulum, golgi	32.07	30.57
Bra036294.1-P	Field mustard	endoplasmic reticulum	32.61	14.71

Protein Annotations

MapMan:26.10.2.4	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra012918	EnsemblPlants:Bra012918.1	EnsemblPlants:Bra012918.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0007154	GO:GO:0007165	GO:GO:0007264	GO:GO:0008150	GO:GO:0009987	InterPro:IPR024156
UniProt:M4D8V8	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51417	PANTHER:PTHR11711
PANTHER:PTHR11711:SF293	SMART:SM00175	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF	InterPro:Small_GTPase_ARF/SAR	TIGRFAMs:TIGR00231	UniParc:UPI0001BA82DF	:	:

Description

AT3G49870 (E=5e-100) ATARLA1C | ATARLA1C (ADP-ribosylation factor-like A1C); GTP binding

Coordinates

chrA03:-:21521566..21522653

Molecular Weight (calculated)

20599.0 Da

IEP (calculated)

7.951

GRAVY (calculated)

-0.085

Length

184 amino acids

Sequence
(BLAST)

001: MGLWEAFLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT KGNVTIKLWD LGGQPRFRSM WERYCRAVSA IVYVVDAADP
101: DNLSVSKSEL HDLLSKTSLN GIPLLVLGNK IDKPGALSKE ALTHEMELQS LTDREVCCFM ISCKNSTNID QVIDWLVKHS KSKN

Best Arabidopsis Sequence Match ( AT3G49870.1 )
(BLAST)

001: MGLLEAFLNW LRSLFFKQEM ELSLIGLQNA GKTSLVNVVA TGGYSEDMIP TVGFNMRKVT KGNVTIKLWD LGGQPRFRSM WERYCRAVSA IVYVVDAADP
101: DNLSVSKSEL HDLLSKTSLN GIPLLVLGNK IDKPGALSKE ALTDEMGLTS LTDREVCCFM ISCKNSTNID QVIDWLVKHS KSKN

Arabidopsis Description

ARL8AADP-ribosylation factor-like protein 8a [Source:UniProtKB/Swiss-Prot;Acc:Q8VY57]
SUBAcon: [extracellular,endoplasmic reticulum,vacuole,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.