Factsheet for Bra036294.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 3
endoplasmic reticulum 6
extracellular 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra004965.1-P
Bra010452.1-P
Bra012351.1-P
Bra013908.1-P
Bra013910.1-P
Bra021502.1-P
Bra021503.1-P
Bra024548.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G02080.1	Bra012351.1-P	AT1G22920.1	21798944
AT4G02080.1	Bra024548.1-P	AT1G22920.1	21798944
AT4G02080.1	Bra004965.1-P	AT2G40380.1	21798944
AT4G02080.1	Bra021502.1-P	AT3G13720.1	21798944
AT4G02080.1	Bra021503.1-P	AT3G13720.1	21798944
AT4G02080.1	Bra010452.1-P	AT4G25680.1	21798944
AT4G02080.1	Bra013908.1-P	AT4G25680.1	21798944
AT4G02080.1	Bra013910.1-P	AT4G25680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22027	Canola	endoplasmic reticulum, extracellular	47.06	99.48
Bra000895.1-P	Field mustard	endoplasmic reticulum, extracellular	46.81	98.96
AT4G02080.1	Thale cress	endoplasmic reticulum	46.32	97.93
TraesCS3A01G193800.1	Wheat	golgi	44.85	94.82
EES00709	Sorghum	endoplasmic reticulum, extracellular	44.85	94.82
TraesCS3B01G221700.1	Wheat	endoplasmic reticulum, extracellular	44.85	94.82
TraesCS5A01G089200.1	Wheat	golgi	44.85	94.82
Zm00001d040752_P001	Maize	endoplasmic reticulum, extracellular	44.85	94.82
TraesCS3D01G196200.1	Wheat	endoplasmic reticulum, extracellular	44.61	94.3
TraesCS5D01G101300.1	Wheat	golgi	44.61	94.3
KXG23692	Sorghum	endoplasmic reticulum, extracellular	44.61	94.3
Bra027937.1-P	Field mustard	endoplasmic reticulum, extracellular	44.85	93.85
TraesCS5B01G095200.1	Wheat	endoplasmic reticulum, extracellular	44.36	93.78
Os01t0338000-01	Rice	plasma membrane	44.36	93.78
Bra038169.1-P	Field mustard	endoplasmic reticulum, extracellular	44.61	93.33
Os01t0254000-01	Rice	plasma membrane	43.87	92.75
Solyc01g100350.2.1	Tomato	plastid	43.87	92.75
PGSC0003DMT400007183	Potato	endoplasmic reticulum, golgi	43.87	92.75
Os12t0560300-01	Rice	plasma membrane	43.87	92.75
KRG96730	Soybean	endoplasmic reticulum	43.63	92.23
KRH33832	Soybean	endoplasmic reticulum	43.63	92.23
KRH68446	Soybean	endoplasmic reticulum	43.63	92.23
KRG92955	Soybean	endoplasmic reticulum, extracellular	43.63	92.23
Zm00001d040278_P001	Maize	extracellular	43.38	91.71
EES02699	Sorghum	endoplasmic reticulum, extracellular	43.38	91.71
HORVU3Hr1G035000.2	Barley	plasma membrane	43.14	91.19
Bra018576.1-P	Field mustard	endoplasmic reticulum, golgi	43.14	91.19
TraesCS3A01G172900.1	Wheat	golgi	43.14	91.19
TraesCS3B01G203800.1	Wheat	endoplasmic reticulum	43.14	91.19
VIT_16s0013g00170.t01	Wine grape	cytosol	23.53	88.89
PGSC0003DMT400068658	Potato	endoplasmic reticulum, extracellular	41.67	88.08
Solyc01g060130.2.1	Tomato	endoplasmic reticulum, extracellular	41.42	87.56
TraesCS3D01G179300.1	Wheat	endoplasmic reticulum, extracellular	43.14	87.56
EES15193	Sorghum	endoplasmic reticulum	37.25	77.95
Zm00001d049068_P001	Maize	cytosol	36.76	77.32
KXG28257	Sorghum	endoplasmic reticulum	36.76	77.32
TraesCS7B01G236300.1	Wheat	cytosol	36.52	77.2
TraesCS7D01G332100.1	Wheat	endoplasmic reticulum	36.27	76.68
HORVU7Hr1G080190.1	Barley	endoplasmic reticulum	36.27	76.68
Os06t0225000-00	Rice	endoplasmic reticulum	36.27	76.29
HORVU3Hr1G045150.3	Barley	plastid	37.25	68.16
VIT_14s0060g01340.t01	Wine grape	endoplasmic reticulum, extracellular	38.73	66.67
Zm00001d009211_P001	Maize	mitochondrion	44.85	55.96
Bra024440.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	15.2	33.7
Bra037841.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.95	33.15
Bra012918.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.71	32.61
Bra031680.1-P	Field mustard	cytosol	12.99	32.52
Bra028142.1-P	Field mustard	cytosol	14.46	32.07
GSMUA_Achr11P...	Banana	mitochondrion, plastid	16.42	27.57
Bra029979.1-P	Field mustard	mitochondrion	8.33	20.24

Protein Annotations

MapMan:22.4.2.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra036294	EnsemblPlants:Bra036294.1	EnsemblPlants:Bra036294.1-P	InterPro:DUF4228_plant
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	GO:GO:0015031	GO:GO:0016192	InterPro:IPR006687	UniProt:M4F5D8	InterPro:P-loop_NTPase
PFAM:PF00025	PFAM:PF14009	PRINTS:PR00328	PFscan:PS51422	PANTHER:PTHR11711	PANTHER:PTHR11711:SF165
SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase_ARF/SAR	InterPro:Small_GTPase_SAR1
TIGRFAMs:TIGR00231	UniParc:UPI0002542002	SEG:seg	:	:	:

Description

AT4G02080 (E=4e-094) ASAR1, ATSARA1C, ATSAR2 | ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2); GTP binding

Coordinates

chrA09:-:377166..380313

Molecular Weight (calculated)

45444.7 Da

IEP (calculated)

9.331

GRAVY (calculated)

-0.293

Length

408 amino acids

Sequence
(BLAST)

001: MFMIDWFYGV LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLA TVPFLILGNK IDIPYAASED ELRYHLGLSN FTTGKGKVNL VDSNVRPLEV FMCSIVRKMG YGEGFKWLSQ YINLHAYDHP
201: GLRMGNTIGS RKLETAAMSG GKVVLSDGRV QNLEEETTVA EIMLENPKHV VVEFDPSSIT FNKDGKTVKK KLTPLPADNT LEPGKIYLVL PAKRSGSGGG
301: AKSSSSSAVM TSEEIRKMLF SATAMVRSSF SYYEGILPWF TTRSYSNSNP AVDAVVAATS VGKLEAETEE EGRPEFLSRQ LSGRGWKPSL DPIKEKKAKK
401: KIHKLLSF

Best Arabidopsis Sequence Match ( AT4G02080.1 )
(BLAST)

001: MFMIDWFYGV LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLA SVPFLILGNK IDIPYAASED ELRYHLGLSN FTTGKGKVNL TDSNVRPLEV FMCSIVRKMG YGEGFKWVSQ YIK

Arabidopsis Description

SAR1ASAR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V5S8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.