Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G236300.1 | Wheat | cytosol | 96.37 | 96.37 |
| HORVU7Hr1G080190.1 | Barley | endoplasmic reticulum | 92.75 | 92.75 |
| CDY65544 | Canola | endoplasmic reticulum, extracellular | 77.72 | 78.53 |
| PGSC0003DMT400007183 | Potato | endoplasmic reticulum, golgi | 78.24 | 78.24 |
| CDY32159 | Canola | endoplasmic reticulum, golgi | 78.24 | 78.24 |
| CDY31105 | Canola | endoplasmic reticulum, golgi | 78.24 | 78.24 |
| PGSC0003DMT400068658 | Potato | endoplasmic reticulum, extracellular | 78.24 | 78.24 |
| CDX95000 | Canola | endoplasmic reticulum, golgi | 78.24 | 78.24 |
| CDX93520 | Canola | endoplasmic reticulum, golgi | 78.24 | 78.24 |
| Solyc01g100350.2.1 | Tomato | plastid | 78.24 | 78.24 |
| TraesCS3D01G196200.1 | Wheat | endoplasmic reticulum, extracellular | 78.24 | 78.24 |
| KRH50759 | Soybean | endoplasmic reticulum | 78.24 | 78.24 |
| Bra018576.1-P | Field mustard | endoplasmic reticulum, golgi | 78.24 | 78.24 |
| AT1G56330.1 | Thale cress | endoplasmic reticulum | 78.24 | 78.24 |
| VIT_07s0005g01330.t01 | Wine grape | endoplasmic reticulum, extracellular | 78.24 | 78.24 |
| KXG28257 | Sorghum | endoplasmic reticulum | 78.24 | 77.84 |
| KRH37008 | Soybean | endoplasmic reticulum | 77.72 | 77.72 |
| KRH11980 | Soybean | endoplasmic reticulum, extracellular | 77.72 | 77.72 |
| KRH02329 | Soybean | endoplasmic reticulum, extracellular | 77.72 | 77.72 |
| PGSC0003DMT400018800 | Potato | cytosol | 77.72 | 77.72 |
| PGSC0003DMT400023327 | Potato | endoplasmic reticulum, extracellular | 77.72 | 77.72 |
| Solyc01g060130.2.1 | Tomato | endoplasmic reticulum, extracellular | 77.72 | 77.72 |
| Solyc01g079540.2.1 | Tomato | plastid | 77.72 | 77.72 |
| Solyc06g009660.2.1 | Tomato | extracellular | 77.72 | 77.72 |
| TraesCS5D01G101300.1 | Wheat | golgi | 77.72 | 77.72 |
| VIT_05s0077g01230.t01 | Wine grape | endoplasmic reticulum, extracellular | 77.72 | 77.72 |
| AT3G62560.1 | Thale cress | endoplasmic reticulum | 77.72 | 77.72 |
| KRH68446 | Soybean | endoplasmic reticulum | 77.2 | 77.2 |
| AT1G09180.1 | Thale cress | extracellular | 77.2 | 77.2 |
| AT4G02080.1 | Thale cress | endoplasmic reticulum | 77.2 | 77.2 |
| Bra000895.1-P | Field mustard | endoplasmic reticulum, extracellular | 77.2 | 77.2 |
| KRG92955 | Soybean | endoplasmic reticulum, extracellular | 77.2 | 77.2 |
| CDX90955 | Canola | endoplasmic reticulum, extracellular | 77.2 | 77.2 |
| CDY22027 | Canola | endoplasmic reticulum, extracellular | 77.2 | 77.2 |
| CDX91807 | Canola | endoplasmic reticulum, extracellular | 77.2 | 77.2 |
| Bra027937.1-P | Field mustard | endoplasmic reticulum, extracellular | 77.72 | 76.92 |
| Bra038169.1-P | Field mustard | endoplasmic reticulum, extracellular | 77.72 | 76.92 |
| CDY59269 | Canola | endoplasmic reticulum, extracellular | 77.72 | 76.92 |
| CDY41713 | Canola | endoplasmic reticulum, extracellular | 77.72 | 76.92 |
| CDY39001 | Canola | endoplasmic reticulum, extracellular | 77.72 | 76.92 |
| Os06t0225000-00 | Rice | endoplasmic reticulum | 77.2 | 76.8 |
| KRH33832 | Soybean | endoplasmic reticulum | 76.68 | 76.68 |
| KRG96730 | Soybean | endoplasmic reticulum | 76.68 | 76.68 |
| EES15193 | Sorghum | endoplasmic reticulum | 77.2 | 76.41 |
| KRH50760 | Soybean | endoplasmic reticulum | 76.17 | 76.17 |
| KRH02328 | Soybean | endoplasmic reticulum | 76.17 | 76.17 |
| TraesCS3D01G179300.1 | Wheat | endoplasmic reticulum, extracellular | 79.27 | 76.12 |
| Zm00001d049068_P001 | Maize | cytosol | 75.65 | 75.26 |
| GSMUA_Achr9P21350_001 | Banana | endoplasmic reticulum, extracellular | 74.61 | 74.61 |
| VIT_16s0013g00170.t01 | Wine grape | cytosol | 39.38 | 70.37 |
| VIT_05s0165g00230.t01 | Wine grape | cytosol | 58.55 | 66.47 |
| AT1G02620.1 | Thale cress | endoplasmic reticulum | 39.9 | 63.11 |
| VIT_14s0060g01340.t01 | Wine grape | endoplasmic reticulum, extracellular | 70.98 | 57.81 |
| VIT_02s0033g01130.t01 | Wine grape | cytosol | 37.31 | 40.45 |
| Bra036294.1-P | Field mustard | endoplasmic reticulum | 76.68 | 36.27 |
| CDY07095 | Canola | endoplasmic reticulum | 76.68 | 36.19 |
| TraesCS6D01G274800.1 | Wheat | cytosol | 31.09 | 32.61 |
| TraesCS4D01G260100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.57 | 32.07 |
Protein Annotations
| MapMan:22.4.2.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| InterPro:IPR006687 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 | PFscan:PS51422 | PANTHER:PTHR11711 |
| PANTHER:PTHR11711:SF203 | SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF/SAR |
| InterPro:Small_GTPase_SAR1 | TIGRFAMs:TIGR00231 | EnsemblPlantsGene:TraesCS7D01G332100 | EnsemblPlants:TraesCS7D01G332100.1 | TIGR:cd00879 | SEG:seg |
Description
No Description!
Coordinates
chr7D:+:423583983..423585101
Molecular Weight (calculated)
22112.7 Da
IEP (calculated)
6.684
GRAVY (calculated)
-0.126
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLVDWFFDA LAYLGLWQKD AKILFLGLDN AGKTTLLQML KDERLAQHQP TQHPTSEELS IGKIRFKAFD LGGHALARRV WKDYFAKVDA VVYLVDAADR
101: ERFNETKQEL DSLLSAEALF GVPFLVLGNK IDIASALSEH ELRYYLGLEY YTTGKGNVDL SHNGMRPLEI FMCSVVRKMG YGDGFRWMSQ YIK
101: ERFNETKQEL DSLLSAEALF GVPFLVLGNK IDIASALSEH ELRYYLGLEY YTTGKGNVDL SHNGMRPLEI FMCSVVRKMG YGDGFRWMSQ YIK
001: MGPLTRVLIL VEWFSQVDAL VYLVDAYDQE RFAESKKELD ALLSDESLAT VPFLILGNKI DIPYAASEDE LRFHLGLSNF TTGKGKVNLT DSNVRPLEVF
101: MCSIVRKMGY GEGFKWLSQY IK
101: MCSIVRKMGY GEGFKWLSQY IK
Arabidopsis Description
Ras-related small GTP-binding family protein [Source:UniProtKB/TrEMBL;Acc:Q3E6Q3]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.