Factsheet for VIT_02s0033g01130.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	endoplasmic reticulum
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g009660.2.1	Tomato	extracellular	49.44	45.6
VIT_07s0005g01330.t01	Wine grape	endoplasmic reticulum, extracellular	49.44	45.6
PGSC0003DMT400018800	Potato	cytosol	49.44	45.6
VIT_05s0165g00230.t01	Wine grape	cytosol	43.26	45.29
Solyc01g079540.2.1	Tomato	plastid	48.88	45.08
PGSC0003DMT400023327	Potato	endoplasmic reticulum, extracellular	48.88	45.08
TraesCS5D01G101300.1	Wheat	golgi	47.75	44.04
TraesCS5B01G095200.1	Wheat	endoplasmic reticulum, extracellular	47.75	44.04
TraesCS5A01G089200.1	Wheat	golgi	47.75	44.04
KXG23692	Sorghum	endoplasmic reticulum, extracellular	47.75	44.04
Os01t0338000-01	Rice	plasma membrane	47.75	44.04
Os12t0560300-01	Rice	plasma membrane	47.75	44.04
EES00709	Sorghum	endoplasmic reticulum, extracellular	47.19	43.52
Zm00001d040752_P001	Maize	endoplasmic reticulum, extracellular	47.19	43.52
VIT_05s0077g01230.t01	Wine grape	endoplasmic reticulum, extracellular	46.63	43.01
TraesCS3D01G196200.1	Wheat	endoplasmic reticulum, extracellular	46.63	43.01
TraesCS3B01G221700.1	Wheat	endoplasmic reticulum, extracellular	46.63	43.01
TraesCS3A01G193800.1	Wheat	golgi	46.63	43.01
Os01t0254000-01	Rice	plasma membrane	46.63	43.01
VIT_16s0013g00170.t01	Wine grape	cytosol	25.84	42.59
Zm00001d040278_P001	Maize	extracellular	46.07	42.49
EES02699	Sorghum	endoplasmic reticulum, extracellular	46.07	42.49
TraesCS3B01G203800.1	Wheat	endoplasmic reticulum	45.51	41.97
TraesCS3A01G172900.1	Wheat	golgi	45.51	41.97
HORVU3Hr1G035000.2	Barley	plasma membrane	45.51	41.97
TraesCS3D01G179300.1	Wheat	endoplasmic reticulum, extracellular	45.51	40.3
TraesCS7B01G236300.1	Wheat	cytosol	41.01	37.82
HORVU7Hr1G080190.1	Barley	endoplasmic reticulum	41.01	37.82
TraesCS7D01G332100.1	Wheat	endoplasmic reticulum	40.45	37.31
KXG28257	Sorghum	endoplasmic reticulum	40.45	37.11
Zm00001d049068_P001	Maize	cytosol	40.45	37.11
EES15193	Sorghum	endoplasmic reticulum	40.45	36.92
Os06t0225000-00	Rice	endoplasmic reticulum	38.76	35.57
VIT_14s0060g01340.t01	Wine grape	endoplasmic reticulum, extracellular	38.2	28.69
HORVU3Hr1G045150.3	Barley	plastid	34.27	27.35
Zm00001d009211_P001	Maize	mitochondrion	47.19	25.69
VIT_14s0006g01090.t01	Wine grape	cytosol	17.98	19.39
VIT_00s0601g00030.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	17.98	17.39
VIT_03s0091g00970.t01	Wine grape	cytosol	17.42	16.85
VIT_15s0024g01360.t01	Wine grape	cytosol	3.93	14.58

Protein Annotations

EntrezGene:100266574	MapMan:20.1.2.2.6	MapMan:22.4.2.1	Gene3D:3.40.50.300	ProteinID:CCB60356	ProteinID:CCB60356.1
UniProt:F6I090	EMBL:FN596505	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150
InterPro:IPR006687	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51422	PANTHER:PTHR11711
PANTHER:PTHR11711:SF220	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTPase_ARF/SAR	InterPro:Small_GTPase_SAR1	UniParc:UPI0002109713
ArrayExpress:VIT_02s0033g01130	EnsemblPlantsGene:VIT_02s0033g01130	EnsemblPlants:VIT_02s0033g01130.t01	RefSeq:XP_010644277.1	:	:

Description

No Description!

Coordinates

chr2:-:16443005..16444116

Molecular Weight (calculated)

20056.0 Da

IEP (calculated)

5.813

GRAVY (calculated)

-0.133

Length

178 amino acids

Sequence
(BLAST)

001: MLLHMLKDER LVPHQLTQYS TLEELSIGKI QFKVFGLGGH QIARGVWKVY YAKVDVVMYL VDAYNKERFA ESKKELDALL SDEVLVDVPF LMSTSSSQNS
101: HLVSKATCLW ESLLARNSQY EVLTSSPIED LIAHMEHRYR ISGSSLLAAM DQSSQIPHTD VLTVQSSDLA SSHLDGRE

Best Arabidopsis Sequence Match ( AT5G40740.1 )
(BLAST)

001: MTMDREKERE LELESAMYTN CLLLGLDPNV IGLGASNGTP RVGLFRHSNP KLGEQLLYFI LSSLRGPAQS SKDFDKVWPI FDSAQSRDFR KVVQAIISEL
101: ESQGALPRSN SRVSSLATCC GPRFVELLWQ LSLHALREVH RRTFPADVAS NPLPSSLTDV SFSHAATLLP VTKARIVLER RRFLKNAETA VQRQAMWSNL
201: AHEMTAEFRG LCAEEAYLQQ ELEKLNDLRN KVKQEGEVWD DLVSSSSQNS HLVSKATRLW DSIMARKGQH EVLASGPIED LIAHREHRYR ISGSALLAAM
301: DQSSQVPRAE LLSAHSDDSA SLADDKELSD GSYTNMHDHS LVDSFETASS QASDETLSRV DDRGGKINQT VDVAEVIRRW THALQRIHKQ SLLLAKANDG
401: DGPDILRTAS DGGTSGHVES LAATLTEHQQ HLASFQVLIN QLKEVSPAIQ KSISECTEMV NSLPPTLPPV TRSNGQASSL LQSQGSGRIM EGVSNDVAEL
501: TSTMSNVQLE KVSASPTLKL PQLFSSTPTS SGKGGNGQKR QTMASQVNKM ESLSEKNSTD QALSNARPDN LPTDTSSSFV HNLKKSVREA ALLIPSSAGS
601: SRDSQSDEGS EHYFVPLSAT GFSRFPSETK ALPLRGSRAL TSLSEPSFLE PNVPDSFAPS KYSDIPDTYD DLDSFKDYDN GNGFLSVAGS NSVASDAQQS
701: FYDIDDQVFS PPLLMDSSLL SDAYEDLLAP LSETEAALME H

Arabidopsis Description

AUG6AUG6 [Source:UniProtKB/TrEMBL;Acc:A0A178UQ56]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.