Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G221700.1 | Wheat | endoplasmic reticulum, extracellular | 99.48 | 99.48 |
| TraesCS3A01G193800.1 | Wheat | golgi | 99.48 | 99.48 |
| Zm00001d040752_P001 | Maize | endoplasmic reticulum, extracellular | 98.45 | 98.45 |
| EES00709 | Sorghum | endoplasmic reticulum, extracellular | 98.45 | 98.45 |
| Os01t0338000-01 | Rice | plasma membrane | 96.89 | 96.89 |
| AT4G02080.1 | Thale cress | endoplasmic reticulum | 94.82 | 94.82 |
| Bra000895.1-P | Field mustard | endoplasmic reticulum, extracellular | 94.82 | 94.82 |
| VIT_05s0077g01230.t01 | Wine grape | endoplasmic reticulum, extracellular | 94.82 | 94.82 |
| CDX90955 | Canola | endoplasmic reticulum, extracellular | 94.82 | 94.82 |
| CDY22027 | Canola | endoplasmic reticulum, extracellular | 94.82 | 94.82 |
| CDX91807 | Canola | endoplasmic reticulum, extracellular | 94.3 | 94.3 |
| KRH68446 | Soybean | endoplasmic reticulum | 93.78 | 93.78 |
| TraesCS5D01G101300.1 | Wheat | golgi | 93.78 | 93.78 |
| KRG96730 | Soybean | endoplasmic reticulum | 93.26 | 93.26 |
| PGSC0003DMT400023327 | Potato | endoplasmic reticulum, extracellular | 93.26 | 93.26 |
| Solyc01g079540.2.1 | Tomato | plastid | 93.26 | 93.26 |
| VIT_07s0005g01330.t01 | Wine grape | endoplasmic reticulum, extracellular | 93.26 | 93.26 |
| PGSC0003DMT400018800 | Potato | cytosol | 92.75 | 92.75 |
| Solyc06g009660.2.1 | Tomato | extracellular | 92.75 | 92.75 |
| AT3G62560.1 | Thale cress | endoplasmic reticulum | 92.75 | 92.75 |
| KRH50759 | Soybean | endoplasmic reticulum | 92.23 | 92.23 |
| KRH02329 | Soybean | endoplasmic reticulum, extracellular | 91.71 | 91.71 |
| KRH50760 | Soybean | endoplasmic reticulum | 91.19 | 91.19 |
| KRH37008 | Soybean | endoplasmic reticulum | 91.19 | 91.19 |
| KRH11980 | Soybean | endoplasmic reticulum, extracellular | 91.19 | 91.19 |
| KRH33832 | Soybean | endoplasmic reticulum | 91.19 | 91.19 |
| KRG92955 | Soybean | endoplasmic reticulum, extracellular | 91.19 | 91.19 |
| AT1G56330.1 | Thale cress | endoplasmic reticulum | 91.19 | 91.19 |
| KRH02328 | Soybean | endoplasmic reticulum | 90.67 | 90.67 |
| CDY65544 | Canola | endoplasmic reticulum, extracellular | 89.64 | 90.58 |
| CDY59269 | Canola | endoplasmic reticulum, extracellular | 91.19 | 90.26 |
| CDY41713 | Canola | endoplasmic reticulum, extracellular | 91.19 | 90.26 |
| Bra027937.1-P | Field mustard | endoplasmic reticulum, extracellular | 91.19 | 90.26 |
| PGSC0003DMT400007183 | Potato | endoplasmic reticulum, golgi | 90.16 | 90.16 |
| Solyc01g100350.2.1 | Tomato | plastid | 90.16 | 90.16 |
| CDY39001 | Canola | endoplasmic reticulum, extracellular | 90.67 | 89.74 |
| Bra038169.1-P | Field mustard | endoplasmic reticulum, extracellular | 90.67 | 89.74 |
| CDX93520 | Canola | endoplasmic reticulum, golgi | 89.12 | 89.12 |
| Bra018576.1-P | Field mustard | endoplasmic reticulum, golgi | 89.12 | 89.12 |
| CDX95000 | Canola | endoplasmic reticulum, golgi | 89.12 | 89.12 |
| CDY31105 | Canola | endoplasmic reticulum, golgi | 89.12 | 89.12 |
| AT1G09180.1 | Thale cress | extracellular | 88.6 | 88.6 |
| CDY32159 | Canola | endoplasmic reticulum, golgi | 88.6 | 88.6 |
| TraesCS3D01G179300.1 | Wheat | endoplasmic reticulum, extracellular | 91.71 | 88.06 |
| PGSC0003DMT400068658 | Potato | endoplasmic reticulum, extracellular | 87.05 | 87.05 |
| Solyc01g060130.2.1 | Tomato | endoplasmic reticulum, extracellular | 86.53 | 86.53 |
| VIT_16s0013g00170.t01 | Wine grape | cytosol | 48.19 | 86.11 |
| AT1G02620.1 | Thale cress | endoplasmic reticulum | 50.26 | 79.51 |
| TraesCS7D01G332100.1 | Wheat | endoplasmic reticulum | 78.24 | 78.24 |
| VIT_05s0165g00230.t01 | Wine grape | cytosol | 67.36 | 76.47 |
| HORVU3Hr1G045150.3 | Barley | plastid | 83.42 | 72.2 |
| VIT_14s0060g01340.t01 | Wine grape | endoplasmic reticulum, extracellular | 81.87 | 66.67 |
| Zm00001d009211_P001 | Maize | mitochondrion | 98.45 | 58.1 |
| VIT_02s0033g01130.t01 | Wine grape | cytosol | 43.01 | 46.63 |
| Bra036294.1-P | Field mustard | endoplasmic reticulum | 94.3 | 44.61 |
| CDY07095 | Canola | endoplasmic reticulum | 94.3 | 44.5 |
| TraesCS4D01G260100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 31.61 | 33.15 |
| TraesCS6D01G274800.1 | Wheat | cytosol | 31.61 | 33.15 |
Protein Annotations
| MapMan:22.4.2.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| InterPro:IPR006687 | InterPro:P-loop_NTPase | PFAM:PF00025 | PRINTS:PR00328 | PFscan:PS51422 | PANTHER:PTHR11711 |
| PANTHER:PTHR11711:SF165 | SMART:SM00177 | SMART:SM00178 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase_ARF/SAR |
| InterPro:Small_GTPase_SAR1 | TIGRFAMs:TIGR00231 | EnsemblPlantsGene:TraesCS3D01G196200 | EnsemblPlants:TraesCS3D01G196200.1 | TIGR:cd00879 | SEG:seg |
Description
No Description!
Coordinates
chr3D:-:193594957..193598173
Molecular Weight (calculated)
22129.7 Da
IEP (calculated)
7.702
GRAVY (calculated)
-0.205
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLWDWFYGV LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFTESKKEL DALLSDDSLA NVPFLILGNK IDIPYASSEE ELRYHLGLSN FTTGKGKVNL VDSNVRPLEV FMCSVVRKMG YGDGFKWVSQ YIK
101: ERFTESKKEL DALLSDDSLA NVPFLILGNK IDIPYASSEE ELRYHLGLSN FTTGKGKVNL VDSNVRPLEV FMCSVVRKMG YGDGFKWVSQ YIK
001: MFMIDWFYGV LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLA SVPFLILGNK IDIPYAASED ELRYHLGLSN FTTGKGKVNL TDSNVRPLEV FMCSIVRKMG YGEGFKWVSQ YIK
101: ERFAESKKEL DALLSDESLA SVPFLILGNK IDIPYAASED ELRYHLGLSN FTTGKGKVNL TDSNVRPLEV FMCSIVRKMG YGEGFKWVSQ YIK
Arabidopsis Description
SAR1ASAR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V5S8]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.